Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0203700-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:5434232:5440324:1 gene:Os03g0203700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 1 description:Similar to Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2). (Os03t0203700-01);Similar to Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2). (Os03t0203700-02)
Sequence	ATGGAGAGCTACCTGAAGGAGAATTTCGGCGGGGTGAAGGCGAAGCACTCGTCGGACGAG GCGCTGGGGCGATGGCGCAGGTTGGTCGGCGTCGTCAAGAACCCCAAGCGGCGGTTCCGC TTCACCGCCAACCTCGACAAGCGATCCGAGGCCGCCGCCATGAAGCGATCCAACCAGGAG AAGCTGCGAGTTGCTGTGCTAGTGTCAAAGGCTGCACTTCAGTTCATCCAAGGACTTGCT CCGGCGAGCGAGTACACGGTCCCCGACGACGTCAAGGCGGCGGGCTACGGCATCTGCGCC GAGGAGCTGAGCTCCATCGTGGAGAGCCACGACATCAAGAAGCTCAAGTCCCATGGCGGC GTGGAGGCCATCGCGGCGAAGCTGTGCACCTCGCCGGAGGACGGGCTCCCGAAGTCGAGG CGCCGGCAAGCCGTCCGGGAGGAGCTGTTCGGCATCAACAGGTTCGCCGAGACGGAGTCG CGCAGCTTCTGGGTGTTCGTCTGGGAGGCGCTCCAGGACATGACGCTGATGATCCTCGCG GCGTGCGCCTTCTTCTCCCTCGTCGTCGGCATCGCCACCGAGGGGTGGCCCAAGGGCGCG CACGACGGGCTCGGCATCGTGGCCAGCATCCTTCTCGTCGTCTTCGTCACGGCGACCAGC GACTACCGGCAGTCGCTGCAGTTCAAGGACCTCGACAAGGAGAAGAAGAAGATCACGGTG CAGGTCTCCCGGAACGGGTACAGGCAGAAGCTGTCCATCTACGACCTCCTCGCCGGCGAC ATCGTGCACCTCTCCATCGGCGACCAGGTGCCCGCCGATGGCTTGTTCCTGTCCGGATTC TCGCTGCTCATCAACGAGTCGAGCCTGACCGGGGAGAGCGAGCCCGTCGCCGTCAATGCC GAGAACCCGTTCCTCCTGTCGGGGACCAAGGTGCAGGATGGTTCTTGCAAGATGCTCGTC ACGACGGTCGGGATGAGGACGCAGTGGGGTAAGCTGATGGCCACGCTGAGCGAGGGCGGC GACGATGAGACGCCGTTGCAGGTGAAGCTCAACGGCGTCGCCACCATCATCGGCAAGATC GGCCTCATCTTCGCAGTCGTCACGTTCGCCGTGCTCACCGAGGGCCTCTTCCGGCGCAAG ATCATGGACGCCTCGTACCTGAGCTGGACCGGAGACGACGCGATGGAGCTGCTCGAGTTC TTCGCCATCGCCGTCACCATCGTCGTCGTGGCCGTCCCCGAAGGCCTCCCGCTCGCCGTG ACGCTCAGCCTCGCGTTCGCCATGAAGAAGATGATGAACGACAAGGCGCTCGTCCGGCAC CTCGCCGCCTGCGAGACCATGGGCTCGGCGACCACCATCTGCAGCGACAAGACCGGCACG CTCACGACCAACCACATGACCGTCGTCAAGGCCTGCATCTGCGGCAAGATCAAAGACGTG GAGAGCGCCTCGGACACCAAGAGCTTGTTCTCCGAGCTGCCGGAGTCCGCCATGACGCTG CTCTCGCAGTCCATCTTCAACAACACCGGCGGCGACGTCGTCTTCAACAAGAGCGGGAGT CGCGAGATACTTGGCACACCAACCGAGACGGCCATCCTCGAGTTCGGCCTCTCACTCGGC GGCGACTTCCTGGCCGTGCGCAAGGCGAGCACCCTCGTCAAGGTGGAGCCATTCAACTCG GCCAAGAAGAGAATGGGAGTGGTCATCCAGCTCCCCGGAGGAGCAATGCGTGCACACAGC AAGGGCGCGTCAGAGATCATCTTGGCATCTTGCAGCAAGTACCTGAATGATCAAGGCAAC GTCGTGCCACTCGACGATGCAACCGTTGCTCACCTGAACGCCACGATCAACAGCTTTGCA AACGAGGCGCTCCGTACCTTGTGCCTTGCCTACGTCGATGTCGGTGACGGGTTCTCGGCG AATGACCAGATTCCTGAAGATGGCTACACCTGCATTGGCATTGTGGGGATCAAAGATCCA GTTCGTCCTGGTGTGAAGGAATCGGTTGCCATCTGCAGGTCGGCAGGGATCATGGTGAGG ATGGTCACAGGTGACAACATCAATACAGCGAAGGCGATTGCGCGGGAATGCGGCATTTTG ACTGAAGGTGGCATTGCCATTGAAGGACCGGATTTCAGAACCAAGAGTGCAGAGGAACTG AATGAGTTGATACCAAAAATACAAGTGATGGCTAGATCTTCACCACTTGACAAGCACACC TTGGTGAAGCATCTCCGGACCACTTTTGATGAAGTTGTTGCGGTTACTGGTGATGGCACA AATGATGCTCCTGCTCTTCATGAAGCTGATATTGGACTTGCAATGGGCATTGCTGGAACT GAGGTGGCAAAAGAAAGTGCTGACGTGATTATTCTTGACGACAACTTCTCCACTATAGTC ACTGTTGCTAAATGGGGTCGGTCAGTGTACATTAATATTCAGAAGTTTGTGCAGTTTCAG CTGACAGTCAATGTGGTCGCTCTGATAGTGAACTTCTCCTCAGCTTGCTTGACAGGGAGT GCTCCTCTTACTGCTGTCCAACTGCTCTGGGTTAACATGATCATGGACACACTAGGAGCA CTGGCATTGGCAACTGAACCTCCAAACGATGAACTGATGAAGAGAACTCCTGTTGGAAGG AAAGGGAACTTCATCAGCAACATTATGTGGAGAAACATCCTGGGACAGGCCTTCTACCAA TTCATTGTAATATGGTATCTGCAGACAGAAGGGAAGTGGCTATTTGGACTAAAGGGAGAA AATTCCGATCTAGTCTTGAACACACTCATCTTCAATTGCTTTGTGTTCTGCCAGGTGTTC AATGAGGTGAGCTCAAGGGAGATGGAGAGGATAAATGTATTTGAAGGCATTCTAGACAAC AACGTGTTCGTCGCCGTCCTCGGCAGCACAGTCATCTTCCAGTTCATAATAGTACAGTTC CTGGGTGATTTCGCCAACACGACTCCTCTCACATTGAAGCAGTGGTTCAACTGCATTTTC ATCGGTTTCATAGGGATGCCGATCGCTGCTGCGGTCAAGCTGATCCCAGTTGATTTCTAA

Peptide Sequence

PEP ID	Os03t0203700-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:5434232:5440324:1 gene:Os03g0203700 transcript:Os03t0203700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 1 description:Similar to Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2). (Os03t0203700-01);Similar to Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2). (Os03t0203700-02)
Sequence	MESYLKENFGGVKAKHSSDEALGRWRRLVGVVKNPKRRFRFTANLDKRSEAAAMKRSNQE KLRVAVLVSKAALQFIQGLAPASEYTVPDDVKAAGYGICAEELSSIVESHDIKKLKSHGG VEAIAAKLCTSPEDGLPKSRRRQAVREELFGINRFAETESRSFWVFVWEALQDMTLMILA ACAFFSLVVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITV QVSRNGYRQKLSIYDLLAGDIVHLSIGDQVPADGLFLSGFSLLINESSLTGESEPVAVNA ENPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI GLIFAVVTFAVLTEGLFRRKIMDASYLSWTGDDAMELLEFFAIAVTIVVVAVPEGLPLAV TLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKIKDV ESASDTKSLFSELPESAMTLLSQSIFNNTGGDVVFNKSGSREILGTPTETAILEFGLSLG GDFLAVRKASTLVKVEPFNSAKKRMGVVIQLPGGAMRAHSKGASEIILASCSKYLNDQGN VVPLDDATVAHLNATINSFANEALRTLCLAYVDVGDGFSANDQIPEDGYTCIGIVGIKDP VRPGVKESVAICRSAGIMVRMVTGDNINTAKAIARECGILTEGGIAIEGPDFRTKSAEEL NELIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGT EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGS APLTAVQLLWVNMIMDTLGALALATEPPNDELMKRTPVGRKGNFISNIMWRNILGQAFYQ FIVIWYLQTEGKWLFGLKGENSDLVLNTLIFNCFVFCQVFNEVSSREMERINVFEGILDN NVFVAVLGSTVIFQFIIVQFLGDFANTTPLTLKQWFNCIFIGFIGMPIAAAVKLIPVDF

Transcript Sequence

Transcript ID	Os03t0203700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5434232:5440324:1 gene:Os03g0203700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 1 description:Similar to Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2). (Os03t0203700-01);Similar to Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2). (Os03t0203700-02)
Sequence	GATCGGAGGAGGGGGTCGTTGGATTGGGACCCAATTGAAAGGGAAAGGTTGAAGAGGCGC AATGGAGAGCTACCTGAAGGAGAATTTCGGCGGGGTGAAGGCGAAGCACTCGTCGGACGA GGCGCTGGGGCGATGGCGCAGGTTGGTCGGCGTCGTCAAGAACCCCAAGCGGCGGTTCCG CTTCACCGCCAACCTCGACAAGCGATCCGAGGCCGCCGCCATGAAGCGATCCAACCAGGA GAAGCTGCGAGTTGCTGTGCTAGTGTCAAAGGCTGCACTTCAGTTCATCCAAGGACTTGC TCCGGCGAGCGAGTACACGGTCCCCGACGACGTCAAGGCGGCGGGCTACGGCATCTGCGC CGAGGAGCTGAGCTCCATCGTGGAGAGCCACGACATCAAGAAGCTCAAGTCCCATGGCGG CGTGGAGGCCATCGCGGCGAAGCTGTGCACCTCGCCGGAGGACGGGCTCCCGAAGTCGAG GCGCCGGCAAGCCGTCCGGGAGGAGCTGTTCGGCATCAACAGGTTCGCCGAGACGGAGTC GCGCAGCTTCTGGGTGTTCGTCTGGGAGGCGCTCCAGGACATGACGCTGATGATCCTCGC GGCGTGCGCCTTCTTCTCCCTCGTCGTCGGCATCGCCACCGAGGGGTGGCCCAAGGGCGC GCACGACGGGCTCGGCATCGTGGCCAGCATCCTTCTCGTCGTCTTCGTCACGGCGACCAG CGACTACCGGCAGTCGCTGCAGTTCAAGGACCTCGACAAGGAGAAGAAGAAGATCACGGT GCAGGTCTCCCGGAACGGGTACAGGCAGAAGCTGTCCATCTACGACCTCCTCGCCGGCGA CATCGTGCACCTCTCCATCGGCGACCAGGTGCCCGCCGATGGCTTGTTCCTGTCCGGATT CTCGCTGCTCATCAACGAGTCGAGCCTGACCGGGGAGAGCGAGCCCGTCGCCGTCAATGC CGAGAACCCGTTCCTCCTGTCGGGGACCAAGGTGCAGGATGGTTCTTGCAAGATGCTCGT CACGACGGTCGGGATGAGGACGCAGTGGGGTAAGCTGATGGCCACGCTGAGCGAGGGCGG CGACGATGAGACGCCGTTGCAGGTGAAGCTCAACGGCGTCGCCACCATCATCGGCAAGAT CGGCCTCATCTTCGCAGTCGTCACGTTCGCCGTGCTCACCGAGGGCCTCTTCCGGCGCAA GATCATGGACGCCTCGTACCTGAGCTGGACCGGAGACGACGCGATGGAGCTGCTCGAGTT CTTCGCCATCGCCGTCACCATCGTCGTCGTGGCCGTCCCCGAAGGCCTCCCGCTCGCCGT GACGCTCAGCCTCGCGTTCGCCATGAAGAAGATGATGAACGACAAGGCGCTCGTCCGGCA CCTCGCCGCCTGCGAGACCATGGGCTCGGCGACCACCATCTGCAGCGACAAGACCGGCAC GCTCACGACCAACCACATGACCGTCGTCAAGGCCTGCATCTGCGGCAAGATCAAAGACGT GGAGAGCGCCTCGGACACCAAGAGCTTGTTCTCCGAGCTGCCGGAGTCCGCCATGACGCT GCTCTCGCAGTCCATCTTCAACAACACCGGCGGCGACGTCGTCTTCAACAAGAGCGGGAG TCGCGAGATACTTGGCACACCAACCGAGACGGCCATCCTCGAGTTCGGCCTCTCACTCGG CGGCGACTTCCTGGCCGTGCGCAAGGCGAGCACCCTCGTCAAGGTGGAGCCATTCAACTC GGCCAAGAAGAGAATGGGAGTGGTCATCCAGCTCCCCGGAGGAGCAATGCGTGCACACAG CAAGGGCGCGTCAGAGATCATCTTGGCATCTTGCAGCAAGTACCTGAATGATCAAGGCAA CGTCGTGCCACTCGACGATGCAACCGTTGCTCACCTGAACGCCACGATCAACAGCTTTGC AAACGAGGCGCTCCGTACCTTGTGCCTTGCCTACGTCGATGTCGGTGACGGGTTCTCGGC GAATGACCAGATTCCTGAAGATGGCTACACCTGCATTGGCATTGTGGGGATCAAAGATCC AGTTCGTCCTGGTGTGAAGGAATCGGTTGCCATCTGCAGGTCGGCAGGGATCATGGTGAG GATGGTCACAGGTGACAACATCAATACAGCGAAGGCGATTGCGCGGGAATGCGGCATTTT GACTGAAGGTGGCATTGCCATTGAAGGACCGGATTTCAGAACCAAGAGTGCAGAGGAACT GAATGAGTTGATACCAAAAATACAAGTGATGGCTAGATCTTCACCACTTGACAAGCACAC CTTGGTGAAGCATCTCCGGACCACTTTTGATGAAGTTGTTGCGGTTACTGGTGATGGCAC AAATGATGCTCCTGCTCTTCATGAAGCTGATATTGGACTTGCAATGGGCATTGCTGGAAC TGAGGTGGCAAAAGAAAGTGCTGACGTGATTATTCTTGACGACAACTTCTCCACTATAGT CACTGTTGCTAAATGGGGTCGGTCAGTGTACATTAATATTCAGAAGTTTGTGCAGTTTCA GCTGACAGTCAATGTGGTCGCTCTGATAGTGAACTTCTCCTCAGCTTGCTTGACAGGGAG TGCTCCTCTTACTGCTGTCCAACTGCTCTGGGTTAACATGATCATGGACACACTAGGAGC ACTGGCATTGGCAACTGAACCTCCAAACGATGAACTGATGAAGAGAACTCCTGTTGGAAG GAAAGGGAACTTCATCAGCAACATTATGTGGAGAAACATCCTGGGACAGGCCTTCTACCA ATTCATTGTAATATGGTATCTGCAGACAGAAGGGAAGTGGCTATTTGGACTAAAGGGAGA AAATTCCGATCTAGTCTTGAACACACTCATCTTCAATTGCTTTGTGTTCTGCCAGGTGTT CAATGAGGTGAGCTCAAGGGAGATGGAGAGGATAAATGTATTTGAAGGCATTCTAGACAA CAACGTGTTCGTCGCCGTCCTCGGCAGCACAGTCATCTTCCAGTTCATAATAGTACAGTT CCTGGGTGATTTCGCCAACACGACTCCTCTCACATTGAAGCAGTGGTTCAACTGCATTTT CATCGGTTTCATAGGGATGCCGATCGCTGCTGCGGTCAAGCTGATCCCAGTTGATTTCTA AGTAGGAAAGCAGAACTAATTCAAGACACGGGACTGAAGTCGGTAGGGATTAGAGGCAGT ACCATGGGCATAACAAAGTTCTCTTTATGCGCTTGTTTAGATGTGAACCTCTGCCCCCCC CCCCCCCCCCCCTTTTTTTCTTGCAGAGTATGATCCAAGATTGTATGGTGTTTAATGGAC TCGTGTAGATCTTTCCTTCATGTCATTTTCCTCATGTTCTTTCCTTGGAATGTTGGAACT TGCAATTGTATATGGATCGCTTGATAAGTTTGACATTTGTTTGATTCTACACCCTTGAGT CCTTGACAGGGTGTATGAATTGACTCGTGTAAGTTTCTTCCCTTGTTGCCATCCTACTGT TTTTTTGTGGCCAATCTGGGACTGTAGCAAAGTTACTTGCAATAAAATCAATCGATTTCA TTGTACTGG