Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0203100-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:5400960:5406847:1 gene:Os03g0203100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleolar 27S pre-rRNA processing, Urb2/Npa2, C-terminal domain containing protein. (Os03t0203100-01)
Sequence	GTTGAAAAGAGGTCATGCAAAGATGTGGAGAATAGTGGCAGCCAATCTTCTCACCGAGAA ATTACTCTTTGTAATGTTTCAGTGCAGCTCCTTTGTGATACTATTATTTATGACCGAAAG GTTCTGTTGAAGAATTTGGTGTCAGGTTTTTGCCATGCTCTGAAGAAATCGGTATTGTCT TTTGTTACTGATGCTAATGAAGATAATGACTTGTTGGACTCGCCACCTGATTTGGTGGAT ATATTAACTAAACTGGAAAATGAGAAGTTTTTTAGTACAAATTCTGATGTTACACACACA AATGGCATAGATAAACTATGGATTTGTGAGAATTTACTTAATTTTTTTAGTACAGTTCCT GGATTTCATGCAAACTCCAAGTCATTGTTGCAACTTATAGCTTACATTCTCCATCTGGAA AGACTGCTGCTATTGGCAATGGTATGCCATCGTTATGAATCTTGTAATTCCATGGGGCTA CTTCGTCTGTTTGTATGCTGTCGAAGAGCAATGAAAAATCTTATCTTCAATTTTGGTAAA GAATTTCCAGAGTTGAAGCAATACTCAGCATTTTCCAAAATTTTTGGTGGCTCCTGTCTG ATTTGGCTTTTGAGGTCTGTTCAGGAACTTGTCAGTTTGTCACACAAAATATTTGAAGAG CACACTGATGAGATGAAAAATACAATTTTCTCCCTGGTAGATAAGACATCAGAAATATTT TCAACACTAACTAACATGAATTCTGTATTTTACTTGTTGGGTGCAAAGAAACAAATCATA TCTTCCAGCGGAGAAAGCAGTACTCCAAAACATGATGATCAGGCATTCAGCATACTAGAA AATTCAGCTTTGGAGCATGTCAAAATTATGGCTGAACTGTTAGAGAAGTCTACAACTGGC ATTCCTGTAACTGTTAAGGGTAGTCAGTGTGTTATCAAATTAGAGAACTGTTATGACACT GTATGCTGGGATAGATTATTATGCACCATGTCTTGCATAAGAGGATTCTTGTGGGGTCTT ATTTCAGCACTAGAAGGCACATGCAAAGATTATCTATCAAGCCCAGAGGAAAGGAACGTG ATGTTTCAGTATGCCTCCAGATTCAGTGGGTGTGTTGCTAAGTTTGAGGCCTTTGTAGAT ATTTGCATGCATGTCTTGTTTATGGAGACCAAGGATTGCGAGTTGGCTGATTTAATCTCT GTTCATCTTCCACAAGAGCTGGACTGCGAGAACAACTCTCTGAATATTACTGCAATCATG GATGAATGGACTAGGCACCAACCTGAGGAGATCGGATTTCACTCAGATGGTGTACTAAAT ATTTCAACTGAGACTCGTGGTTTTGATCTGCCCAAAGTACAATTTGTGAAAGGATTTCTT TTAGAAAACCTTTTAAGTGGTGAGGGTCCATCCATAGCATTTACTTTAAGGGAGCTCTAC AATGCATCTGCTGCTATTGTTAAGCTGAAGGGAATCCTATCATTTCCAAGTGAGGTATGT AGACAGATATGCAGTCCTTTCCAAAAGCTTCCATTGGGTCCAATGGTTGCGACAGCTTAC ATCGCTCTACACAAATTAGCAGACATGTCTAACTGGCCTGACATGTTTTCTCTTTTATGG ATTGACGGAATATTAAGTTATCTTGAAGCTGTAGGAAACATTTTGGCATTACCTGAGATC AACATGTCAAAAGAATTGTACACTCAAGTAGTTAATGCTCACTTGAGAGCTATTGGAAAA TGCATTTTGCTTCAAGGAAAGAATGCAACTCTGCCTACCCATGAGATTGGATCAAGTACA AAGACACTATATTTGCAGAATAGATCTGGTCATGTTGTTGCTAAAGGTATCATCAATAGG CAGAACAGATTAAATTCACTGAAATCAAGACTTAGACTATCACTGGGAAAATATGTCAAT GTTTCATCAAACATGCATCTAAATACAGCTGTGCAAGTCATTGAAAGAGCATTGGTTGGA GTGAATCGTTTCAGTCATTCAATATATGAAATAAACACAGGAAATTGTGATGGTGGGACA GTTTCTTCTGATGTTGCGGCTGGGATTTATTGCCTCTATCTGGTTCTTGAAACTGTGCCA GGAAATAAACGTGTTTTTAAGAGAACCGTCCCAGGCCTAATTGGTGCTTTATTCAATATT GTCTTACATCTTGAAAGTCCTTTTATTTTCTACACAGAGAGGATGCCTGTTCATTACCCT TATTTGCACCCAGATGCTGGAGCCATTGTCCTAATGTGTATTGAGGTTATAACAGCATTT GTGGGGAGACATTCTTTTCAAATTGATTCATGCCATGTCTCTCAGTGCTTGCATGTTCCC ATGACACTTTTTAAGGGCTTCAAACATCTTCTTTCATGTCGGAATATGCCCCATTCTTGC AACCAGAGTGAAGAGCAACTGGCAGCTAGTAATGAATATATACTTGATAGACAATTTTCA GTTGACATGTATGCTTCATGTTGCAAATTGTTATGCACTACTATTCGACACCAACAGCGT GAGGTTGCACGATGCGTGGCTGTCCTGGAAGATTCAGTAAACATACTTCTAAGTTGTTTG GAGTCTCCAAATCCCAAAATGGTTAGTAGGGCCGGTTATTTTTCTTGGAACATGGAGGAA TCAATGAAATGTGCTTCCTTTTTTAGAAGGATTTATGAAGAGATGCGCCAGCAAAGAGAA CTCCTAGGAAAGCACTCGATGTACTTTCTTGCAGGTTACATTTCTATGTATTCTGGACAG GGTCCATTTCAGACAGGCATAACACGAGAAATTGATGAGGCCTTGAGACCTGGGGTTTAT TCGCTTATCGATATCTGCGAGGAAAGTGATCTTCAACTGCTCCACACATATCTGGGTGAG GGTCCATGCCGAACAACTTTTGCAAATCTGGTGCAGGACTACAAATTACACTTCCAGTAT CAGGGCAAAATCTAG

Peptide Sequence

PEP ID	Os03t0203100-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:5400960:5406847:1 gene:Os03g0203100 transcript:Os03t0203100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleolar 27S pre-rRNA processing, Urb2/Npa2, C-terminal domain containing protein. (Os03t0203100-01)
Sequence	VEKRSCKDVENSGSQSSHREITLCNVSVQLLCDTIIYDRKVLLKNLVSGFCHALKKSVLS FVTDANEDNDLLDSPPDLVDILTKLENEKFFSTNSDVTHTNGIDKLWICENLLNFFSTVP GFHANSKSLLQLIAYILHLERLLLLAMVCHRYESCNSMGLLRLFVCCRRAMKNLIFNFGK EFPELKQYSAFSKIFGGSCLIWLLRSVQELVSLSHKIFEEHTDEMKNTIFSLVDKTSEIF STLTNMNSVFYLLGAKKQIISSSGESSTPKHDDQAFSILENSALEHVKIMAELLEKSTTG IPVTVKGSQCVIKLENCYDTVCWDRLLCTMSCIRGFLWGLISALEGTCKDYLSSPEERNV MFQYASRFSGCVAKFEAFVDICMHVLFMETKDCELADLISVHLPQELDCENNSLNITAIM DEWTRHQPEEIGFHSDGVLNISTETRGFDLPKVQFVKGFLLENLLSGEGPSIAFTLRELY NASAAIVKLKGILSFPSEVCRQICSPFQKLPLGPMVATAYIALHKLADMSNWPDMFSLLW IDGILSYLEAVGNILALPEINMSKELYTQVVNAHLRAIGKCILLQGKNATLPTHEIGSST KTLYLQNRSGHVVAKGIINRQNRLNSLKSRLRLSLGKYVNVSSNMHLNTAVQVIERALVG VNRFSHSIYEINTGNCDGGTVSSDVAAGIYCLYLVLETVPGNKRVFKRTVPGLIGALFNI VLHLESPFIFYTERMPVHYPYLHPDAGAIVLMCIEVITAFVGRHSFQIDSCHVSQCLHVP MTLFKGFKHLLSCRNMPHSCNQSEEQLAASNEYILDRQFSVDMYASCCKLLCTTIRHQQR EVARCVAVLEDSVNILLSCLESPNPKMVSRAGYFSWNMEESMKCASFFRRIYEEMRQQRE LLGKHSMYFLAGYISMYSGQGPFQTGITREIDEALRPGVYSLIDICEESDLQLLHTYLGE GPCRTTFANLVQDYKLHFQYQGKI

Transcript Sequence

Transcript ID	Os03t0203100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5400960:5406847:1 gene:Os03g0203100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleolar 27S pre-rRNA processing, Urb2/Npa2, C-terminal domain containing protein. (Os03t0203100-01)
Sequence	TTGTTGAAAAGAGGTCATGCAAAGATGTGGAGAATAGTGGCAGCCAATCTTCTCACCGAG AAATTACTCTTTGTAATGTTTCAGTGCAGCTCCTTTGTGATACTATTATTTATGACCGAA AGGTTCTGTTGAAGAATTTGGTGTCAGGTTTTTGCCATGCTCTGAAGAAATCGGTATTGT CTTTTGTTACTGATGCTAATGAAGATAATGACTTGTTGGACTCGCCACCTGATTTGGTGG ATATATTAACTAAACTGGAAAATGAGAAGTTTTTTAGTACAAATTCTGATGTTACACACA CAAATGGCATAGATAAACTATGGATTTGTGAGAATTTACTTAATTTTTTTAGTACAGTTC CTGGATTTCATGCAAACTCCAAGTCATTGTTGCAACTTATAGCTTACATTCTCCATCTGG AAAGACTGCTGCTATTGGCAATGGTATGCCATCGTTATGAATCTTGTAATTCCATGGGGC TACTTCGTCTGTTTGTATGCTGTCGAAGAGCAATGAAAAATCTTATCTTCAATTTTGGTA AAGAATTTCCAGAGTTGAAGCAATACTCAGCATTTTCCAAAATTTTTGGTGGCTCCTGTC TGATTTGGCTTTTGAGGTCTGTTCAGGAACTTGTCAGTTTGTCACACAAAATATTTGAAG AGCACACTGATGAGATGAAAAATACAATTTTCTCCCTGGTAGATAAGACATCAGAAATAT TTTCAACACTAACTAACATGAATTCTGTATTTTACTTGTTGGGTGCAAAGAAACAAATCA TATCTTCCAGCGGAGAAAGCAGTACTCCAAAACATGATGATCAGGCATTCAGCATACTAG AAAATTCAGCTTTGGAGCATGTCAAAATTATGGCTGAACTGTTAGAGAAGTCTACAACTG GCATTCCTGTAACTGTTAAGGGTAGTCAGTGTGTTATCAAATTAGAGAACTGTTATGACA CTGTATGCTGGGATAGATTATTATGCACCATGTCTTGCATAAGAGGATTCTTGTGGGGTC TTATTTCAGCACTAGAAGGCACATGCAAAGATTATCTATCAAGCCCAGAGGAAAGGAACG TGATGTTTCAGTATGCCTCCAGATTCAGTGGGTGTGTTGCTAAGTTTGAGGCCTTTGTAG ATATTTGCATGCATGTCTTGTTTATGGAGACCAAGGATTGCGAGTTGGCTGATTTAATCT CTGTTCATCTTCCACAAGAGCTGGACTGCGAGAACAACTCTCTGAATATTACTGCAATCA TGGATGAATGGACTAGGCACCAACCTGAGGAGATCGGATTTCACTCAGATGGTGTACTAA ATATTTCAACTGAGACTCGTGGTTTTGATCTGCCCAAAGTACAATTTGTGAAAGGATTTC TTTTAGAAAACCTTTTAAGTGGTGAGGGTCCATCCATAGCATTTACTTTAAGGGAGCTCT ACAATGCATCTGCTGCTATTGTTAAGCTGAAGGGAATCCTATCATTTCCAAGTGAGGTAT GTAGACAGATATGCAGTCCTTTCCAAAAGCTTCCATTGGGTCCAATGGTTGCGACAGCTT ACATCGCTCTACACAAATTAGCAGACATGTCTAACTGGCCTGACATGTTTTCTCTTTTAT GGATTGACGGAATATTAAGTTATCTTGAAGCTGTAGGAAACATTTTGGCATTACCTGAGA TCAACATGTCAAAAGAATTGTACACTCAAGTAGTTAATGCTCACTTGAGAGCTATTGGAA AATGCATTTTGCTTCAAGGAAAGAATGCAACTCTGCCTACCCATGAGATTGGATCAAGTA CAAAGACACTATATTTGCAGAATAGATCTGGTCATGTTGTTGCTAAAGGTATCATCAATA GGCAGAACAGATTAAATTCACTGAAATCAAGACTTAGACTATCACTGGGAAAATATGTCA ATGTTTCATCAAACATGCATCTAAATACAGCTGTGCAAGTCATTGAAAGAGCATTGGTTG GAGTGAATCGTTTCAGTCATTCAATATATGAAATAAACACAGGAAATTGTGATGGTGGGA CAGTTTCTTCTGATGTTGCGGCTGGGATTTATTGCCTCTATCTGGTTCTTGAAACTGTGC CAGGAAATAAACGTGTTTTTAAGAGAACCGTCCCAGGCCTAATTGGTGCTTTATTCAATA TTGTCTTACATCTTGAAAGTCCTTTTATTTTCTACACAGAGAGGATGCCTGTTCATTACC CTTATTTGCACCCAGATGCTGGAGCCATTGTCCTAATGTGTATTGAGGTTATAACAGCAT TTGTGGGGAGACATTCTTTTCAAATTGATTCATGCCATGTCTCTCAGTGCTTGCATGTTC CCATGACACTTTTTAAGGGCTTCAAACATCTTCTTTCATGTCGGAATATGCCCCATTCTT GCAACCAGAGTGAAGAGCAACTGGCAGCTAGTAATGAATATATACTTGATAGACAATTTT CAGTTGACATGTATGCTTCATGTTGCAAATTGTTATGCACTACTATTCGACACCAACAGC GTGAGGTTGCACGATGCGTGGCTGTCCTGGAAGATTCAGTAAACATACTTCTAAGTTGTT TGGAGTCTCCAAATCCCAAAATGGTTAGTAGGGCCGGTTATTTTTCTTGGAACATGGAGG AATCAATGAAATGTGCTTCCTTTTTTAGAAGGATTTATGAAGAGATGCGCCAGCAAAGAG AACTCCTAGGAAAGCACTCGATGTACTTTCTTGCAGGTTACATTTCTATGTATTCTGGAC AGGGTCCATTTCAGACAGGCATAACACGAGAAATTGATGAGGCCTTGAGACCTGGGGTTT ATTCGCTTATCGATATCTGCGAGGAAAGTGATCTTCAACTGCTCCACACATATCTGGGTG AGGGTCCATGCCGAACAACTTTTGCAAATCTGGTGCAGGACTACAAATTACACTTCCAGT ATCAGGGCAAAATCTAGTCAAACTTGCTAAAGGCTTTTTGGAGCATTTGATGTTGATCCG TCTTATTCTGCATAAGATATCCAATGCATCATCTGCATGATCTTGGGTTTGTGCTGTACT ATTAATTGCTGACTGCTTATGCACTGAATTTTCACCCTTCAGAACGGAAAGGGAATATGG CTGTTGCTGAAGATTTAAAGCTCATCAAATTAATCTGCTGGATTTGGAACAAGATGAAAA GGAGCAAACAAGAAAATGAGCTTAGTAATCAAGATGAGAAGGACTTGGTGATCTGCAGCC TTTGGCTCTTGTTCCATAAATCACAACTTGGTAATCTCTAGCACGTAGTGTTCATATTCT GGGGTAATATTTAACACACTTGCCCCCCAAACTAAACTAATTCTTTTGGAAGGTAGTTCA ATCAGACTGATCCTATCCAGGCCATACTCCATATTAC