Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0202500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:5373013:5379417:1 gene:Os03g0202500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 132 description:Cyclin-like F-box domain containing protein. (Os03t0202500-01)
Sequence	ATGGGGAAGCTGCTGGACCTGAAGCGGCTCATGTCCGTGCCGAAGGAGCGGAATCGTCGT CGGCGGCAGCGGCAAATCCGAGCCCGCAATGGTTCAATTGATTCAGTGGCTAAAAGAAAG GGATCACTCTGCCAACAAGTTGCAAATTCTGATGGCGAGAGAAGAACAAGATATTCAGGG CCTAACCTTCCAGAGGACATCTGGTGCCATATACACTCCCTGATGCCATTCAAAGATGCT GCCCGTGCTGCATGTGTGTCTCATGCTTTTCGTCGTTCCTGGCAACACCGCCCCAATCTT ATATTTTGTATTGGAACACTGGGGTTGGATTTCATCAACAAAATTGATCGTATTATAAAA AACCACTCAGGCATTGGCATCAAATCGCTACAGTTAGAATATGATACTTTTTGCAATGCT AGAAGGAGCGCTAGCATCAGCTATCATCTCAATAATTGGCTTCAGATTGCTGTTACACCA TGGATTGAAGAACTAATCCTTACACTGTCGCTATCTTCATACAATGTGGATTACAATTTC CCGTGCTCACTTTTATCTGATGGGAGAGGAAGTTCATTGCGACATCTTTATCTTGGCAGT TGTTTCTTTCATCCTACAGTTAATCTTGAATTGAGAAACCTGACGAGGTTGCATCTGGTT ACTGTACATATTACAGGAGATGAGTTTGGGTGCCTTCTTTCGAATTCTTATGCTTTGGAG CGATTGGAACTTAAATATTGTTATGGAATAATTTGTCTGAAGATACCTTGCCTGTTGCAA CGCCTTAGCCACCTGGAAGTGTTTGAATGCAGAATGCTGCAAGCCATAGAGAATAAGGCT CCAAATCTTTGCAGTTTTGACCTTGGAGCTAGGCAGGTACGGCTCTTGCTTGGTGAATCA TTGCAAATGAAAACACTATCCTTGGACTATCCTAGTGCCGTCTATTATGCTCGTGCAGAG CTTCCATCCAATGTGCCAAATCTTGAAATTCTCACCATTTGCTCGGATCACGAGATGGTT GATACACCAATGTTGCCTAGCAAATTTTTCTATCTCAAGTGCTTGACTATTGATCTTGCT TGGAGACTTTCCCCAGCCTATGATTATTTCTCTCTGATTTCTTTTCTTGACGCTTCTCCT TCCTTGGAGACTTTTTGTCTAGAGGACCGAATGGAGAATGAATTGATTATTGGAGATATG TCACATATGAGGCAAATGCTAGAACACCGTCATGACAACCTCCAGAGCGTGGAGATTATT GGCTTTTGCTATACAAAGAGCTTGATCGAGCTAACATGTCATATTCTTGACAATACAACG TCGCTTAAGCACCTTAAACTGGATACTACTCGTGATGTTTTTAGCTGTTCTACAGGCAAA CACGACAAATGCTTCCATATGGGTAAGGATATGCTCACCGAAGCCAAGAAAGCAGTTTTG GCAATTGAAACTTACATCGAGCCAAAAGTTCCCTCCACTGTCATGCTAAATGTTGTGAAA CCTTGCAACCGTTGCCATGTTGCTGAATCTTAG

Peptide Sequence

PEP ID	Os03t0202500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:5373013:5379417:1 gene:Os03g0202500 transcript:Os03t0202500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 132 description:Cyclin-like F-box domain containing protein. (Os03t0202500-01)
Sequence	MGKLLDLKRLMSVPKERNRRRRQRQIRARNGSIDSVAKRKGSLCQQVANSDGERRTRYSG PNLPEDIWCHIHSLMPFKDAARAACVSHAFRRSWQHRPNLIFCIGTLGLDFINKIDRIIK NHSGIGIKSLQLEYDTFCNARRSASISYHLNNWLQIAVTPWIEELILTLSLSSYNVDYNF PCSLLSDGRGSSLRHLYLGSCFFHPTVNLELRNLTRLHLVTVHITGDEFGCLLSNSYALE RLELKYCYGIICLKIPCLLQRLSHLEVFECRMLQAIENKAPNLCSFDLGARQVRLLLGES LQMKTLSLDYPSAVYYARAELPSNVPNLEILTICSDHEMVDTPMLPSKFFYLKCLTIDLA WRLSPAYDYFSLISFLDASPSLETFCLEDRMENELIIGDMSHMRQMLEHRHDNLQSVEII GFCYTKSLIELTCHILDNTTSLKHLKLDTTRDVFSCSTGKHDKCFHMGKDMLTEAKKAVL AIETYIEPKVPSTVMLNVVKPCNRCHVAES

Transcript Sequence

Transcript ID	Os03t0202500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5373013:5379417:1 gene:Os03g0202500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 132 description:Cyclin-like F-box domain containing protein. (Os03t0202500-01)
Sequence	GTCGATTTCTCGCTCGTTCGATCCGAGCGGGGTATCGTCGTGGTTATGGGGAAGCTGCTG GACCTGAAGCGGCTCATGTCCGTGCCGAAGGAGCGGAATCGTCGTCGGCGGCAGCGGCAA ATCCGAGCCCGCAATGGTTCAATTGATTCAGTGGCTAAAAGAAAGGGATCACTCTGCCAA CAAGTTGCAAATTCTGATGGCGAGAGAAGAACAAGATATTCAGGGCCTAACCTTCCAGAG GACATCTGGTGCCATATACACTCCCTGATGCCATTCAAAGATGCTGCCCGTGCTGCATGT GTGTCTCATGCTTTTCGTCGTTCCTGGCAACACCGCCCCAATCTTATATTTTGTATTGGA ACACTGGGGTTGGATTTCATCAACAAAATTGATCGTATTATAAAAAACCACTCAGGCATT GGCATCAAATCGCTACAGTTAGAATATGATACTTTTTGCAATGCTAGAAGGAGCGCTAGC ATCAGCTATCATCTCAATAATTGGCTTCAGATTGCTGTTACACCATGGATTGAAGAACTA ATCCTTACACTGTCGCTATCTTCATACAATGTGGATTACAATTTCCCGTGCTCACTTTTA TCTGATGGGAGAGGAAGTTCATTGCGACATCTTTATCTTGGCAGTTGTTTCTTTCATCCT ACAGTTAATCTTGAATTGAGAAACCTGACGAGGTTGCATCTGGTTACTGTACATATTACA GGAGATGAGTTTGGGTGCCTTCTTTCGAATTCTTATGCTTTGGAGCGATTGGAACTTAAA TATTGTTATGGAATAATTTGTCTGAAGATACCTTGCCTGTTGCAACGCCTTAGCCACCTG GAAGTGTTTGAATGCAGAATGCTGCAAGCCATAGAGAATAAGGCTCCAAATCTTTGCAGT TTTGACCTTGGAGCTAGGCAGGTACGGCTCTTGCTTGGTGAATCATTGCAAATGAAAACA CTATCCTTGGACTATCCTAGTGCCGTCTATTATGCTCGTGCAGAGCTTCCATCCAATGTG CCAAATCTTGAAATTCTCACCATTTGCTCGGATCACGAGATGGTTGATACACCAATGTTG CCTAGCAAATTTTTCTATCTCAAGTGCTTGACTATTGATCTTGCTTGGAGACTTTCCCCA GCCTATGATTATTTCTCTCTGATTTCTTTTCTTGACGCTTCTCCTTCCTTGGAGACTTTT TGTCTAGAGGACCGAATGGAGAATGAATTGATTATTGGAGATATGTCACATATGAGGCAA ATGCTAGAACACCGTCATGACAACCTCCAGAGCGTGGAGATTATTGGCTTTTGCTATACA AAGAGCTTGATCGAGCTAACATGTCATATTCTTGACAATACAACGTCGCTTAAGCACCTT AAACTGGATACTACTCGTGATGTTTTTAGCTGTTCTACAGGCAAACACGACAAATGCTTC CATATGGGTAAGGATATGCTCACCGAAGCCAAGAAAGCAGTTTTGGCAATTGAAACTTAC ATCGAGCCAAAAGTTCCCTCCACTGTCATGCTAAATGTTGTGAAACCTTGCAACCGTTGC CATGTTGCTGAATCTTAGTTCTATTTTTTTCCTAACATAATTCCTATGTAGATGATTATG GAGTTTTTTAACTGATCATGTTTTCTGTCTTCACACAACTGAATTACGAGTCACATCCAA TTGAATTATGAGTC