Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0201700-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:5324635:5327751:1 gene:Os03g0201700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetylation protein 2 domain containing protein. (Os03t0201700-01)
Sequence	ATGGCGGAGGCGGCCGTGAGGTGCCTCCGGGACGGGCGCCTCGACGGGGAGCACGCTCCG GCACTTGCCGTGGCGAGTAATATCCAGTGCGGCCCGCTCGCCGCCGGCGCCATGCTCCAC CTCGCGGCCGCCGTGGCCTCCAACGCCGCCGCGGGGAAGGCGCAGGCGAGGGGACTGGTG ATCGTGGCGTTCGATCGGAGCCCGGAGGTGTATCTCGACTTCATGCGGCGCCGCGGCCTT GATCCAAATGCTTTGAATCGATGTGTACGGATATTGGATTGCTATTCAGACCCAATTGGA TGGAATCAGAAGATTAGAAGTCAGCAGCAACAAGAAAGTGGTGCAGATCTCTGCTCAGCG AACAAAGAGAATGTTACAATTTTCAGAAATGTGAAGGATCTTGATAAATTGATGTGCTCC ACTATTGATCTTGGAAGAGGGTTTGCAGGAGAAGGCAAAATCTATTTTTCAATTGCTGTT GACTCAATTAGTTCTATGTTAAGGCGTGCTTCAGTGTCATCAATTTCAAGCTTCCTCAGT AATCTTCGGAGCCATGATCAAATATCATCAATATTTTGGCTAATACATTCTGATCTCCAT GAACCCAAATTTTCCCGAGCCTTTGAATGTCTCTCTACCATGGTTGCTTCATTAGAGCCA GCTGTGGTTGATTCTGTTTATGAGGAAGAAATTCCAGGGAATATTTCTTTCCTGGAGGAA AATTATTCTAAAGCAAAGTTTTATTTACGCCTAAAACGGCGGAATGGACGGGTCAAGCAC CTTTACGAGGAGTTACATGTTGAGGGAAATGATGTTAGATTTGTTTCTGCTCCTTCTGTA AGTACAGAAGTGAGCCAAAGTCTGTTGCCTAAGGTTCAGTTCAATCTTGAGCTGTCAGAG AAGGAGTGCAGTGACAAGGCAAATGTTGTTCTTCCTTTTGAACATCAAGGAAAGGGTGAG CCTATCCATATATACGACGGACGGAGATCTCTCCCAGAGGCTCAACAAGATAGCAATTTA ACTGCATCCGCTCTCCTGGATGAAGTAAAATTTCCTAAATCTGCAGCTCCAAAGGGTGAA ATTCATTACTTTCGTGATTCTGATGATGAGCAACCTGACTCCGATGAAGACCCAGATGAC GATTTGGATATTTGA

Peptide Sequence

PEP ID	Os03t0201700-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:5324635:5327751:1 gene:Os03g0201700 transcript:Os03t0201700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetylation protein 2 domain containing protein. (Os03t0201700-01)
Sequence	MAEAAVRCLRDGRLDGEHAPALAVASNIQCGPLAAGAMLHLAAAVASNAAAGKAQARGLV IVAFDRSPEVYLDFMRRRGLDPNALNRCVRILDCYSDPIGWNQKIRSQQQQESGADLCSA NKENVTIFRNVKDLDKLMCSTIDLGRGFAGEGKIYFSIAVDSISSMLRRASVSSISSFLS NLRSHDQISSIFWLIHSDLHEPKFSRAFECLSTMVASLEPAVVDSVYEEEIPGNISFLEE NYSKAKFYLRLKRRNGRVKHLYEELHVEGNDVRFVSAPSVSTEVSQSLLPKVQFNLELSE KECSDKANVVLPFEHQGKGEPIHIYDGRRSLPEAQQDSNLTASALLDEVKFPKSAAPKGE IHYFRDSDDEQPDSDEDPDDDLDI

Transcript Sequence

Transcript ID	Os03t0201700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5324635:5327751:1 gene:Os03g0201700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetylation protein 2 domain containing protein. (Os03t0201700-01)
Sequence	AGGGTTTAAGCCGGCGGCGGCGGCGAGGTTGTGCAGATGGCGGAGGCGGCCGTGAGGTGC CTCCGGGACGGGCGCCTCGACGGGGAGCACGCTCCGGCACTTGCCGTGGCGAGTAATATC CAGTGCGGCCCGCTCGCCGCCGGCGCCATGCTCCACCTCGCGGCCGCCGTGGCCTCCAAC GCCGCCGCGGGGAAGGCGCAGGCGAGGGGACTGGTGATCGTGGCGTTCGATCGGAGCCCG GAGGTGTATCTCGACTTCATGCGGCGCCGCGGCCTTGATCCAAATGCTTTGAATCGATGT GTACGGATATTGGATTGCTATTCAGACCCAATTGGATGGAATCAGAAGATTAGAAGTCAG CAGCAACAAGAAAGTGGTGCAGATCTCTGCTCAGCGAACAAAGAGAATGTTACAATTTTC AGAAATGTGAAGGATCTTGATAAATTGATGTGCTCCACTATTGATCTTGGAAGAGGGTTT GCAGGAGAAGGCAAAATCTATTTTTCAATTGCTGTTGACTCAATTAGTTCTATGTTAAGG CGTGCTTCAGTGTCATCAATTTCAAGCTTCCTCAGTAATCTTCGGAGCCATGATCAAATA TCATCAATATTTTGGCTAATACATTCTGATCTCCATGAACCCAAATTTTCCCGAGCCTTT GAATGTCTCTCTACCATGGTTGCTTCATTAGAGCCAGCTGTGGTTGATTCTGTTTATGAG GAAGAAATTCCAGGGAATATTTCTTTCCTGGAGGAAAATTATTCTAAAGCAAAGTTTTAT TTACGCCTAAAACGGCGGAATGGACGGGTCAAGCACCTTTACGAGGAGTTACATGTTGAG GGAAATGATGTTAGATTTGTTTCTGCTCCTTCTGTAAGTACAGAAGTGAGCCAAAGTCTG TTGCCTAAGGTTCAGTTCAATCTTGAGCTGTCAGAGAAGGAGTGCAGTGACAAGGCAAAT GTTGTTCTTCCTTTTGAACATCAAGGAAAGGGTGAGCCTATCCATATATACGACGGACGG AGATCTCTCCCAGAGGCTCAACAAGATAGCAATTTAACTGCATCCGCTCTCCTGGATGAA GTAAAATTTCCTAAATCTGCAGCTCCAAAGGGTGAAATTCATTACTTTCGTGATTCTGAT GATGAGCAACCTGACTCCGATGAAGACCCAGATGACGATTTGGATATTTGAGTTCCACCC ATGGTGTGAGCACCTTATCTGCATACAGAATGCCTTGATCGTACTTGCGAGGTAACCGAT AGCCCCGATCAGAACTTATAATCATGAGTAGTATTAGTATTTGTTACACCTCTGTTTTCT GTTCTTTACACTGATGGTAGTGTTTTTGTGACAAGATAATAGAATGATAGTCCGTCCGTG CTACACACTACCTTGTACTGTTAGTGCATGCATTCAGTTATCCCCAAAATGTTTAAAAAG TGTTTACATATGCAAAACAGCAACAAACTACAATTTCTTGGGGAAACTAAAATGGAAGCA GGCGACCTTTTTTTTCCCTTTATTAAAGGATGGTAGACAAGGAAAGTTTTTATG