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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0201600-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:5321345:5323968:-1 gene:Os03g0201600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ischemia/reperfusion inducible protein. (Os03t0201600-01);Similar to ischemia/reperfusion inducible protein. (Os03t0201600-02)
Sequence

ATGAAGGCGTGCGCGAGGGCAGCGGGGGAGAGGCTCCCCCTGGTCGGTGCTCCCGCCAGG
CAACCCCTGGCTCGGAGTTTTGTTAAGGTCAACAGATTATCATCTCAACATGAGACGAAG
TCTGTGGTATCCTGCTCGGTAAGGGTGTCAGATGACAAGACACACCGAATAGAAGCCACG
GCAGAACACATCCTTCCAGCAACAAATGATCATGTCATGAAAGCAATTGACTCAATTAAC
AGGGGGCAAGTGATTGCGGTGCCCACCGATACGATTTATGGCTTTGCTTGTGATGCATGC
TCTGCAGAAGCAGTTAATCGTATATATGAGATCAAAGGACGCGTACAGACACGGCCTCTT
GCAATCTGTGTTGCTGATGTCCCAGACATATCACGGTTTGCTGTTGTGGATCACCTACCT
CATGGCCTGCTTGATAGTCTACTTCCTGGGCCTGTCACAGTTGTTTTAAAACGAGGTAAC
AACAGTATATTGGAGAGATCTCTTAATCCTGGTTTGGAAAGCATTGGAGTTCGTGTGCCA
GATTTTGATTTCATTCGAGCCATTTCCCGTGGTGCTGGAAGTGCGCTTGCACTTACAAGC
GCCAACTTAAGCGGGCATCCTAGTAGTGTCAACGTCAAAGATTTTGAGGATCTGTGGCCA
CATTGTTCATATGTCTTTGATGGTGGAATCCTCCCTTCTGGGCGTGCTGGTTCAACAATT
GTGGACCTAATAACACCAGGAGTCTACAAGATATTGAGAGATGGAAGTTCAAGGCAGGAA
ACGACAGCGGTGCTCGGCAAGTTTGGCTTTGTTGAAGCTTGGTGA

Peptide Sequence

PEP ID

Os03t0201600-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:5321345:5323968:-1 gene:Os03g0201600 transcript:Os03t0201600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ischemia/reperfusion inducible protein. (Os03t0201600-01);Similar to ischemia/reperfusion inducible protein. (Os03t0201600-02)
Sequence

MKACARAAGERLPLVGAPARQPLARSFVKVNRLSSQHETKSVVSCSVRVSDDKTHRIEAT
AEHILPATNDHVMKAIDSINRGQVIAVPTDTIYGFACDACSAEAVNRIYEIKGRVQTRPL
AICVADVPDISRFAVVDHLPHGLLDSLLPGPVTVVLKRGNNSILERSLNPGLESIGVRVP
DFDFIRAISRGAGSALALTSANLSGHPSSVNVKDFEDLWPHCSYVFDGGILPSGRAGSTI
VDLITPGVYKILRDGSSRQETTAVLGKFGFVEAW

Transcript Sequence

Transcript ID

Os03t0201600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5321345:5323968:-1 gene:Os03g0201600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ischemia/reperfusion inducible protein. (Os03t0201600-01);Similar to ischemia/reperfusion inducible protein. (Os03t0201600-02)
Sequence

GTGGTTTGACTAGTCCTCTCTCTCCGGGAGAAATTTTGCTCCGGCCGCCTCGGCGTCGCG
CTCCGCGGCTCGTAATCTTTCGCGGTGGCCGGCGGCGGGGGAGAGGAGGAGGAGGAGGAG
GAGGGAGATGAAGGCGTGCGCGAGGGCAGCGGGGGAGAGGCTCCCCCTGGTCGGTGCTCC
CGCCAGGCAACCCCTGGCTCGGAGTTTTGTTAAGGTCAACAGATTATCATCTCAACATGA
GACGAAGTCTGTGGTATCCTGCTCGGTAAGGGTGTCAGATGACAAGACACACCGAATAGA
AGCCACGGCAGAACACATCCTTCCAGCAACAAATGATCATGTCATGAAAGCAATTGACTC
AATTAACAGGGGGCAAGTGATTGCGGTGCCCACCGATACGATTTATGGCTTTGCTTGTGA
TGCATGCTCTGCAGAAGCAGTTAATCGTATATATGAGATCAAAGGACGCGTACAGACACG
GCCTCTTGCAATCTGTGTTGCTGATGTCCCAGACATATCACGGTTTGCTGTTGTGGATCA
CCTACCTCATGGCCTGCTTGATAGTCTACTTCCTGGGCCTGTCACAGTTGTTTTAAAACG
AGGTAACAACAGTATATTGGAGAGATCTCTTAATCCTGGTTTGGAAAGCATTGGAGTTCG
TGTGCCAGATTTTGATTTCATTCGAGCCATTTCCCGTGGTGCTGGAAGTGCGCTTGCACT
TACAAGCGCCAACTTAAGCGGGCATCCTAGTAGTGTCAACGTCAAAGATTTTGAGGATCT
GTGGCCACATTGTTCATATGTCTTTGATGGTGGAATCCTCCCTTCTGGGCGTGCTGGTTC
AACAATTGTGGACCTAATAACACCAGGAGTCTACAAGATATTGAGAGATGGAAGTTCAAG
GCAGGAAACGACAGCGGTGCTCGGCAAGTTTGGCTTTGTTGAAGCTTGGTGACAACTTGT
TGACCTCATAAAATTGGTACCATCAAATACTAGTCCCTTTGTTATCTATCTGGCTTCTTG
CTTAGTTAGGTGCTGTACCAGAATATAGGTTGTTGTTTGTGCTTTTCTTTTTCATATTCT
GAATCAGAAGGTGTCAGCTTCCTGTTTCAATGTCAATGCCCTTACAGTATCACGTGAACT
TCGATTGCTACACTACAGTTCATTCTATGGTAGATTACACTAGCATGCCTATGCAAGCTA
AAAGAAATATTGATTGTAATGGATTTTAAT