Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0200700-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:5283554:5286527:-1 gene:Os03g0200700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Surfeit 1 homolog. (Os03t0200700-01);Similar to SURF1. (Os03t0200700-02)
Sequence

GCAGGGAAGGAGGCGGGCGCGTGGTCCAAGCTCTTCCTCTTCGCCCCCGGCGCCATCACC
TTCGGCCTCGGCTCATGGCAGCTCTTCCGGAGGCAGGAGAAGATTGAGATGCTGGACTAC
AGGACGCGGAGGCTGGAGATGGAGCCCATTGCGTGGAACCAGATGGCCCCGTCTGATCTC
AGTGCCGGGGTCGATCCGGCCACACCGGAGTTCCGGAGGATCGTGTGCGAGGGTGATTTC
GACGAGGAGAGGTCGGTGTTCGTCGGGCCTCGCTCCAGGAGCATCTCTGGTGTGACGGAG
AATGGGTATTATGTGGTCACTCCATTGATACCCCGGCCTAGTGAGCATGGCAGTTCGTGG
CCACCTATACTTGTGAATAGAGGGTGGGTTCCTCGTGATTGGCGTGATAAGAACGTACAG
GATCACCAGGGCGTCAGAGAAGTTCCAGAATATAAAGAGGCTGATAAAAAGACAGATGGA
AAAGGTTCATGGTGGAAGTTTTGGTCTAACTCTAAGGAGCCTGAACAATCTTGTGAGATT
GAAAAACCTGTAAAACCTCCTGTAAGAGTTTTGGGAGTTATCCGAGGAAGTGAGAAGCCC
AGCATATTTGTTCCAGCTAATGAACCCAGTGTTGGCCAGTGGTTTTATGTGGATGTTCCC
ATGATTGCTCGTGCATGTGGCCTCCCTGAAAATACTATTTATATAGAAGATATAAATGAG
GATGTCTCTCCAACAAATCCTTATCCTGTTCCAAAAGATGTCAGTACTTTGATTCATCAC
TCAGTGATGCCACATGACCATCTAAAATACACCGTTACATGGTACACTCTTTCTGCTGCT
GTGACTTTCATGGCTGCAAAGCGGATAAAGGCAAAGAAGGTTAAGTTATAG

Peptide Sequence

PEP ID

Os03t0200700-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:5283554:5286527:-1 gene:Os03g0200700 transcript:Os03t0200700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Surfeit 1 homolog. (Os03t0200700-01);Similar to SURF1. (Os03t0200700-02)
Sequence

AGKEAGAWSKLFLFAPGAITFGLGSWQLFRRQEKIEMLDYRTRRLEMEPIAWNQMAPSDL
SAGVDPATPEFRRIVCEGDFDEERSVFVGPRSRSISGVTENGYYVVTPLIPRPSEHGSSW
PPILVNRGWVPRDWRDKNVQDHQGVREVPEYKEADKKTDGKGSWWKFWSNSKEPEQSCEI
EKPVKPPVRVLGVIRGSEKPSIFVPANEPSVGQWFYVDVPMIARACGLPENTIYIEDINE
DVSPTNPYPVPKDVSTLIHHSVMPHDHLKYTVTWYTLSAAVTFMAAKRIKAKKVKL

Transcript Sequence

Transcript ID

Os03t0200700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5283554:5286527:-1 gene:Os03g0200700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Surfeit 1 homolog. (Os03t0200700-01);Similar to SURF1. (Os03t0200700-02)
Sequence

GGCAGGGAAGGAGGCGGGCGCGTGGTCCAAGCTCTTCCTCTTCGCCCCCGGCGCCATCAC
CTTCGGCCTCGGCTCATGGCAGCTCTTCCGGAGGCAGGAGAAGATTGAGATGCTGGACTA
CAGGACGCGGAGGCTGGAGATGGAGCCCATTGCGTGGAACCAGATGGCCCCGTCTGATCT
CAGTGCCGGGGTCGATCCGGCCACACCGGAGTTCCGGAGGATCGTGTGCGAGGGTGATTT
CGACGAGGAGAGGTCGGTGTTCGTCGGGCCTCGCTCCAGGAGCATCTCTGGTGTGACGGA
GAATGGGTATTATGTGGTCACTCCATTGATACCCCGGCCTAGTGAGCATGGCAGTTCGTG
GCCACCTATACTTGTGAATAGAGGGTGGGTTCCTCGTGATTGGCGTGATAAGAACGTACA
GGATCACCAGGGCGTCAGAGAAGTTCCAGAATATAAAGAGGCTGATAAAAAGACAGATGG
AAAAGGTTCATGGTGGAAGTTTTGGTCTAACTCTAAGGAGCCTGAACAATCTTGTGAGAT
TGAAAAACCTGTAAAACCTCCTGTAAGAGTTTTGGGAGTTATCCGAGGAAGTGAGAAGCC
CAGCATATTTGTTCCAGCTAATGAACCCAGTGTTGGCCAGTGGTTTTATGTGGATGTTCC
CATGATTGCTCGTGCATGTGGCCTCCCTGAAAATACTATTTATATAGAAGATATAAATGA
GGATGTCTCTCCAACAAATCCTTATCCTGTTCCAAAAGATGTCAGTACTTTGATTCATCA
CTCAGTGATGCCACATGACCATCTAAAATACACCGTTACATGGTACACTCTTTCTGCTGC
TGTGACTTTCATGGCTGCAAAGCGGATAAAGGCAAAGAAGGTTAAGTTATAGCGGAACAT
AAACCTGTCTCCTGCATCTTGTACTTATTTATGAAGCTCAAGTTCCCGCTGCTTCAGAAA
GAGATGTTCGATAACCTGAGTACTGCATCTTCATCTCTCAGGCAATGATCAAAGTAGTCT
TGCCACATTTGATATGATGTGCATCCATATGGGCATCTCGTAGTTGAACTCAGAGGATAG
AAAAGTTTTGTTAGCAGCTTCTGATATCCTTGATTCTTTTGTTACGGAACTTACATTGAG
GAAACAACGTAGACATTGTTATTTGTTTCTATTCTTTGTAGTTTTTTTGTTC