Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0200200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5261710:5263669:1 gene:Os03g0200200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0200200-01)
Sequence

ATGGGCAACTGCCAGGCGGCGGAGGTGGCGACGGTGGTCATCCAGCACCCGGGCGGCGGC
CGCACGGAGCGCGCGTACTGGGCGATGTCCGCGGGCGCCGTCATGGCGGCCAACCCGGGA
CACTACGTCGCCGCCGTGATCACCTCGCCTCCCGCCGCCGGCGCCTCCTCGGCCACCCCC
GCCGCCGCGCCCGTCAAGCACCTCAAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGC
CGCGTCTACCGCCTCGTCAGCTTCGAAGAGGTGCTGAGAGAGTTCGCGTCGAAGCGGCAT
GTCAAGCTAAGCCGTGCCACGATCAAGGCCAAGGATGACGTGGAGGAGGAGACGAAGCCC
GCCAAGCCTCGCCGCCGGCGAGGCAGCGGCGGCATCGCGCCAGAGGAGGAGTACTCCAGC
CGGTCACTCGCAAAGGTCATGCGCCAGAGTGACGAGCCGGAGCCCGTGGCGAGGGCGAGC
CCGTCCGCCGCGCCGAAGCCGGAGAGCGACATTGATGACCACGCCGACGGCGAGGCGGCC
GAGCCGGACTGCGACCTGGAGGCGCTGCTGCCGCCGCACGGGGTGGTGTTCGGCCGGCGA
GTCGCCCGGCAATGGAGACCGGCGCTGCAGAGCATTGCGGAAGGGTGA

Peptide Sequence

PEP ID

Os03t0200200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5261710:5263669:1 gene:Os03g0200200 transcript:Os03t0200200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0200200-01)
Sequence

MGNCQAAEVATVVIQHPGGGRTERAYWAMSAGAVMAANPGHYVAAVITSPPAAGASSATP
AAAPVKHLKLLRPDDTLLLGRVYRLVSFEEVLREFASKRHVKLSRATIKAKDDVEEETKP
AKPRRRRGSGGIAPEEEYSSRSLAKVMRQSDEPEPVARASPSAAPKPESDIDDHADGEAA
EPDCDLEALLPPHGVVFGRRVARQWRPALQSIAEG

Transcript Sequence

Transcript ID

Os03t0200200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5261710:5263669:1 gene:Os03g0200200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0200200-01)
Sequence

ACTCGCCAAGCCTCTCGCAACCTTAGCTACAGTCCTACAGAAACAAAAGGAGAGCGCGAT
CAAGAAACGGGCGTTGCGCGACATCGGCGCGGGTCGGCGCAGATGGGCAACTGCCAGGCG
GCGGAGGTGGCGACGGTGGTCATCCAGCACCCGGGCGGCGGCCGCACGGAGCGCGCGTAC
TGGGCGATGTCCGCGGGCGCCGTCATGGCGGCCAACCCGGGACACTACGTCGCCGCCGTG
ATCACCTCGCCTCCCGCCGCCGGCGCCTCCTCGGCCACCCCCGCCGCCGCGCCCGTCAAG
CACCTCAAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTC
AGCTTCGAAGAGGTGCTGAGAGAGTTCGCGTCGAAGCGGCATGTCAAGCTAAGCCGTGCC
ACGATCAAGGCCAAGGATGACGTGGAGGAGGAGACGAAGCCCGCCAAGCCTCGCCGCCGG
CGAGGCAGCGGCGGCATCGCGCCAGAGGAGGAGTACTCCAGCCGGTCACTCGCAAAGGTC
ATGCGCCAGAGTGACGAGCCGGAGCCCGTGGCGAGGGCGAGCCCGTCCGCCGCGCCGAAG
CCGGAGAGCGACATTGATGACCACGCCGACGGCGAGGCGGCCGAGCCGGACTGCGACCTG
GAGGCGCTGCTGCCGCCGCACGGGGTGGTGTTCGGCCGGCGAGTCGCCCGGCAATGGAGA
CCGGCGCTGCAGAGCATTGCGGAAGGGTGAGGCCGACCCACTGGCTCAGGCTGGCCGACG
GCGAGCCGGCTGCAAGACTTCGTCGTCGACTCGTCGTTTCCGAGCACACAGCGTAGTACT
GCAGTTGTAGAAAGTGAAGTAGTGACAAGTCTCACTGGACGTGTAGCGTGACAAGTCATG
TAGAATAAAGCTACGAGTACCTTGTGGATATATCCAGCTGATGCATGTACGTATACTATG
GATTGATGATGGGTGTAACGTGACGGATCGTATACTCCATTTAGTTTGC