Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0200000-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:5253519:5254758:1 gene:Os03g0200000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Haemolysin-III related family protein, expressed. (Os03t0200000-00)
Sequence	ATGGCTTCGTCCACGGTGACATTGGAGAAGACGACCACAATCCGTAGCGAAGCCGTTGTC GCGGCCGATGCGGCCGTGGACAGAGCAGCGACGTTGAAGTCTCCTCTCCTGGAAGGAAAG AAGTGCGGCGACGGTGGCGTTGCGAAGCGGTGCTGCGAGCGCAAGTACGAGCTCGTCAGC TACGACGCGCTCCCGGCCTTCCTCAAGCACAACGAGTTCATCATCGACTACTACCGCAGC GAGTGGCCCATCAAGCAGGCGCTCCTCAGCGCCTTCGCCGTCCACAACGAGACCGTCAAC GTCTGGACGCATCTGATCGGGTTCTTCATGTTCCTCGCGCTCACCGTGTGCGCCGCCACG ATGGTTCCCATGGAATCTTCCGCGACGTCCATGACCATGGCCAACAACACCGGCAACCCA ATGGTACTGATGATGATGAGCTACGGCAGCAACGGAGCGGCCATGGCAGTGCAGGCTCTG CGCAACGTGTCCGTCGAATCGGAGCTCGCGGCGGCGGCGTTGTCGGCGGCGGGCGACCAG GTCGCGCGTTGGCCGTTCTACGCGTACCTCTGCGGCGCCATGTTCTGCCTGCTGATGAGC AGCGCGTGCCACCTGCTGGCCTGCCACTCGGAGCACGCCAGCTACGTGCTGCTCCGCCTC GACTACGCCGGCATCACGGGCCTCATCGTCACCTCCTTCTACCCGCTCGTCTACTACACC TTCCTCTGCGACCCGTTCTTCCGCACGCTCTACCTCGGCTTCATCACGCTCTTCGGCGCC GCCGCGGTGGCCGTCTCGCTGATGCCGGTGTTCGAGAAGCCCGAGCTGCGGTGGGCGCGC GCCGGCCTGTTCGCGTGCATGGGCATGTCAGGACTCGTTCCAATCGTGCACAAGATGCTC GTGTTCGGGGCGCGCCCGGAGGCGGTGCTCACCACGGGCTACGAGATGGTCATGGGGGCG TTCTACCTCGCCGGCGTGGTGGTGTACGCCACCAGGGTGCCGGAGCGGTGGATGCCGGGG AAGTTCGACCTCGCCGGCCACAGCCACCAGCTGTTCCACGTGCTCGTCATCGCCGGCGCC TACGCGCACTACCTGGCCGGAGTGGTCTACCTCAGCTGGAGGGACGGGGAAGCTTGCTGA

Peptide Sequence

PEP ID	Os03t0200000-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:5253519:5254758:1 gene:Os03g0200000 transcript:Os03t0200000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Haemolysin-III related family protein, expressed. (Os03t0200000-00)
Sequence	MASSTVTLEKTTTIRSEAVVAADAAVDRAATLKSPLLEGKKCGDGGVAKRCCERKYELVS YDALPAFLKHNEFIIDYYRSEWPIKQALLSAFAVHNETVNVWTHLIGFFMFLALTVCAAT MVPMESSATSMTMANNTGNPMVLMMMSYGSNGAAMAVQALRNVSVESELAAAALSAAGDQ VARWPFYAYLCGAMFCLLMSSACHLLACHSEHASYVLLRLDYAGITGLIVTSFYPLVYYT FLCDPFFRTLYLGFITLFGAAAVAVSLMPVFEKPELRWARAGLFACMGMSGLVPIVHKML VFGARPEAVLTTGYEMVMGAFYLAGVVVYATRVPERWMPGKFDLAGHSHQLFHVLVIAGA YAHYLAGVVYLSWRDGEAC

Transcript Sequence

Transcript ID	Os03t0200000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5253519:5254758:1 gene:Os03g0200000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Haemolysin-III related family protein, expressed. (Os03t0200000-00)
Sequence	ATGGCTTCGTCCACGGTGACATTGGAGAAGACGACCACAATCCGTAGCGAAGCCGTTGTC GCGGCCGATGCGGCCGTGGACAGAGCAGCGACGTTGAAGTCTCCTCTCCTGGAAGGAAAG AAGTGCGGCGACGGTGGCGTTGCGAAGCGGTGCTGCGAGCGCAAGTACGAGCTCGTCAGC TACGACGCGCTCCCGGCCTTCCTCAAGCACAACGAGTTCATCATCGACTACTACCGCAGC GAGTGGCCCATCAAGCAGGCGCTCCTCAGCGCCTTCGCCGTCCACAACGAGACCGTCAAC GTCTGGACGCATCTGATCGGGTTCTTCATGTTCCTCGCGCTCACCGTGTGCGCCGCCACG ATGGTTCCCATGGAATCTTCCGCGACGTCCATGACCATGGCCAACAACACCGGCAACCCA ATGGTACTGATGATGATGAGCTACGGCAGCAACGGAGCGGCCATGGCAGTGCAGGCTCTG CGCAACGTGTCCGTCGAATCGGAGCTCGCGGCGGCGGCGTTGTCGGCGGCGGGCGACCAG GTCGCGCGTTGGCCGTTCTACGCGTACCTCTGCGGCGCCATGTTCTGCCTGCTGATGAGC AGCGCGTGCCACCTGCTGGCCTGCCACTCGGAGCACGCCAGCTACGTGCTGCTCCGCCTC GACTACGCCGGCATCACGGGCCTCATCGTCACCTCCTTCTACCCGCTCGTCTACTACACC TTCCTCTGCGACCCGTTCTTCCGCACGCTCTACCTCGGCTTCATCACGCTCTTCGGCGCC GCCGCGGTGGCCGTCTCGCTGATGCCGGTGTTCGAGAAGCCCGAGCTGCGGTGGGCGCGC GCCGGCCTGTTCGCGTGCATGGGCATGTCAGGACTCGTTCCAATCGTGCACAAGATGCTC GTGTTCGGGGCGCGCCCGGAGGCGGTGCTCACCACGGGCTACGAGATGGTCATGGGGGCG TTCTACCTCGCCGGCGTGGTGGTGTACGCCACCAGGGTGCCGGAGCGGTGGATGCCGGGG AAGTTCGACCTCGCCGGCCACAGCCACCAGCTGTTCCACGTGCTCGTCATCGCCGGCGCC TACGCGCACTACCTGGCCGGAGTGGTCTACCTCAGCTGGAGGGACGGGGAAGCTTGCTGA