Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0199500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5225077:5226496:-1 gene:Os03g0199500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0199500-01)
Sequence

ATGTTGGTGGGAATGGAGGAGGGGGATGCGATGGCGGCGGCGAGCTCGGGTTGCAGCAGC
GGCTGCCAGTCCGGCTGGACCACCTACCTGGACGATCACTCGTCCTACTCCTGCGGGACC
GCGCGGTTCCACGGCAAGGCGCAGCAGCCGTACTACCACTGCGACTACTCCGAGGACGCG
GAGGAGGACGACCTGTCCATGATCTCCGACGCCTCCTCCGGCCCACGCCAGCAGTGCTCC
ACCGGCAACGACGACGGCGCCGCCGCCGCCGCCGCGCATGCCAATGCGGCCCGGAGGAGA
GGCAGGCGCATGGAGCCCACCGCCAGGCGGCAGAGCAAGACGGCCGCCGGCGCGTCTCTT
CTCGAGGACACGGCAAGCTCGCCGGCGTTCTTCAAGTACACCAATGCCTCCGCTGAGGGC
AATGGCTATGGCTATGGCGGCGTGGCCTCTCCGGTGATGGAGATGGGCAATGCGGCCGAC
TTCTCCTGCGCCTTCTCCGCCACGACGGGCTTCGAGAGTCCCTTAAACGGGATTCCCCTG
AGTGGCTACCTGCAAATGCAGTACTCCACTACACATGTCAAGGCGATTCCCGCAAGACAG
GCGCGCAGAGGTGGGGTTGAGAAGAAGAGGCGGTGA

Peptide Sequence

PEP ID

Os03t0199500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5225077:5226496:-1 gene:Os03g0199500 transcript:Os03t0199500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0199500-01)
Sequence

MLVGMEEGDAMAAASSGCSSGCQSGWTTYLDDHSSYSCGTARFHGKAQQPYYHCDYSEDA
EEDDLSMISDASSGPRQQCSTGNDDGAAAAAAHANAARRRGRRMEPTARRQSKTAAGASL
LEDTASSPAFFKYTNASAEGNGYGYGGVASPVMEMGNAADFSCAFSATTGFESPLNGIPL
SGYLQMQYSTTHVKAIPARQARRGGVEKKRR

Transcript Sequence

Transcript ID

Os03t0199500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5225077:5226496:-1 gene:Os03g0199500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0199500-01)
Sequence

GTCTCTTCTCGTTCCTAACACCAGTCCACCTCTGCTTGGTCGTCACCAATTCGTCGGCGG
TAGTGGTGGGTAGAGCACACAGAGGGTGTGTTGCTGCTGAGAGGAGGGGTGGAGAGACCG
GCCGCGTGATGTTGGTGGGAATGGAGGAGGGGGATGCGATGGCGGCGGCGAGCTCGGGTT
GCAGCAGCGGCTGCCAGTCCGGCTGGACCACCTACCTGGACGATCACTCGTCCTACTCCT
GCGGGACCGCGCGGTTCCACGGCAAGGCGCAGCAGCCGTACTACCACTGCGACTACTCCG
AGGACGCGGAGGAGGACGACCTGTCCATGATCTCCGACGCCTCCTCCGGCCCACGCCAGC
AGTGCTCCACCGGCAACGACGACGGCGCCGCCGCCGCCGCCGCGCATGCCAATGCGGCCC
GGAGGAGAGGCAGGCGCATGGAGCCCACCGCCAGGCGGCAGAGCAAGACGGCCGCCGGCG
CGTCTCTTCTCGAGGACACGGCAAGCTCGCCGGCGTTCTTCAAGTACACCAATGCCTCCG
CTGAGGGCAATGGCTATGGCTATGGCGGCGTGGCCTCTCCGGTGATGGAGATGGGCAATG
CGGCCGACTTCTCCTGCGCCTTCTCCGCCACGACGGGCTTCGAGAGTCCCTTAAACGGGA
TTCCCCTGAGTGGCTACCTGCAAATGCAGTACTCCACTACACATGTCAAGGCGATTCCCG
CAAGACAGGCGCGCAGAGGTGGGGTTGAGAAGAAGAGGCGGTGACTCGAGAGGAGCTGTT
GCTGTTGATGGCCTCGTAGGGTGGTGCTCCCGGCCTGTGCAGTGTGCACGCACTGCTCTG
CTCTTCTCTGTTCCGTTCTGTTATTGGGAGAAAGAGGCCGATATGGGCAGGCAGCTGGGT
AGAATGTGTTTGCAAATCTTCAGATCCCCAAGAGACGATTACTACACATTGATCCACCAT
CTGTCTGTCTCCCTCTCCCTCTTCTGTTCTATCTGTCACTCTCTCCTCGCTCTGTTTCAC
TATGACCGTCCCTGTTACTCCCCCAGCTGCAGTTAGTATTCCACTTTTTAGCTCTCAATG
CAGTGGGAAACAACCACCTGAGGCAAAACAAGGCAACGTGAAATCC