Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0198600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:5180779:5182185:-1 gene:Os03g0198600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 12 description:Homeodomain-leucine zipper transcription factor, Regulation of panicle exsertion (Os03t0198600-01)
Sequence	ATGAGCCGTGAGGAGGATGAGAAGCTGCTGTTCCCTTCGTTCGCCTTCCCGGCGGAGTGC TTCCCGGAAGCCGCCACCTCCGGTGGCGAGCAGAAGAAGGCTCGGCAGCGGCGGAGGAGG AAGGTGAAGCCGGAAGCGGCGGCAGCGTTGGCTGGAGAGAGCGGAGGGGATGAGCAGGCG AAGAAGCGGCGGCTGAGCGACGAGCAGGCGCGGTTTCTGGAGATGAGCTTCAAGAAGGAG CGGAAGCTGGAGACGCCGCGCAAGGTGCAGCTCGCCGCGGAGCTGGGCCTCGACGCCAAG CAGGTCGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTCATGGAGGAG GAGTTCGCCAAGCTCCGCTCCGCCCACGACGCCGTCGTCCTCCAGAACTGCCACCTCGAG ACCGAGTTGCTGAAGCTGAAGGAGAGGCTGGCGGATGTAGAGGAGGAGAAGGCGAAGCTA GCAGCTGTCGCCGCGGCGACGACCGGCGGCGGTGGTGGCGGCGGCGGCGGCAGCAGCAGC CCGACCTCGTCGTCGTTCTCCACGGTGACGTACCACCCGGCGCTGGCGGGGCAGTTCGGC GTGGAGGCGGCGGCCGAGGAGGCCGACCTCACCTACATGAGTGAGTACGCGTACAACAGC TACATGCTGGAGTTGGCGGCGGCCGGCTACTGCGGCGGGGTCTACGACCAATTCAGCTGA

Peptide Sequence

PEP ID	Os03t0198600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:5180779:5182185:-1 gene:Os03g0198600 transcript:Os03t0198600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 12 description:Homeodomain-leucine zipper transcription factor, Regulation of panicle exsertion (Os03t0198600-01)
Sequence	MSREEDEKLLFPSFAFPAECFPEAATSGGEQKKARQRRRRKVKPEAAAALAGESGGDEQA KKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEE EFAKLRSAHDAVVLQNCHLETELLKLKERLADVEEEKAKLAAVAAATTGGGGGGGGGSSS PTSSSFSTVTYHPALAGQFGVEAAAEEADLTYMSEYAYNSYMLELAAAGYCGGVYDQFS

Transcript Sequence

Transcript ID	Os03t0198600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5180779:5182185:-1 gene:Os03g0198600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 12 description:Homeodomain-leucine zipper transcription factor, Regulation of panicle exsertion (Os03t0198600-01)
Sequence	ACAGACTCGGACACCACCGGTCACTTGAATTGTCAAGCTAGCTAGCCTTCTCATCAGCCT GGCTCTCAGTCTCAAAGAAAGCACAAAGGTAGCTAGCTTAGCATCGATTGAAGCTGACCA GAGAGATAGTTAAGAATTTGCCATAGCTTAGTGTTTGGTGCATACACACAACTGCTCTCG TTGTTTTTGCTCTTTTGGGTTCGCTCGGAAGATGAGCCGTGAGGAGGATGAGAAGCTGCT GTTCCCTTCGTTCGCCTTCCCGGCGGAGTGCTTCCCGGAAGCCGCCACCTCCGGTGGCGA GCAGAAGAAGGCTCGGCAGCGGCGGAGGAGGAAGGTGAAGCCGGAAGCGGCGGCAGCGTT GGCTGGAGAGAGCGGAGGGGATGAGCAGGCGAAGAAGCGGCGGCTGAGCGACGAGCAGGC GCGGTTTCTGGAGATGAGCTTCAAGAAGGAGCGGAAGCTGGAGACGCCGCGCAAGGTGCA GCTCGCCGCGGAGCTGGGCCTCGACGCCAAGCAGGTCGCCGTCTGGTTCCAGAACCGCCG CGCCCGCCACAAGAGCAAGCTCATGGAGGAGGAGTTCGCCAAGCTCCGCTCCGCCCACGA CGCCGTCGTCCTCCAGAACTGCCACCTCGAGACCGAGTTGCTGAAGCTGAAGGAGAGGCT GGCGGATGTAGAGGAGGAGAAGGCGAAGCTAGCAGCTGTCGCCGCGGCGACGACCGGCGG CGGTGGTGGCGGCGGCGGCGGCAGCAGCAGCCCGACCTCGTCGTCGTTCTCCACGGTGAC GTACCACCCGGCGCTGGCGGGGCAGTTCGGCGTGGAGGCGGCGGCCGAGGAGGCCGACCT CACCTACATGAGTGAGTACGCGTACAACAGCTACATGCTGGAGTTGGCGGCGGCCGGCTA CTGCGGCGGGGTCTACGACCAATTCAGCTGAGCGCCGCCACTCGCCGGGGCCGGCGCCGA CGGAGGATTAACTAGCTACAGTAGCTGTTAATTAATGGATCGATCAATTGCAGGGTAGTA ATTCAGTAGTGGTGGTGTTTATTAGTAGTATCAATGATCGATATATCATCAGTCGTGTTG CCCTAACGAAAAATCTTTAGCGGTGACTTTGCTAAGCCATGTAGATTATTAAATTGGATG TCTTTGTAAGTATATGTGTTTAGAATA