Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0198300-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:5161669:5166608:1 gene:Os03g0198300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C25 description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os03t0198300-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os03t0198300-02)
Sequence	ATGGCGGCGGCGGAGCGCCCGAGCAGGTCCGACGTCGACTTCGCCGACGTCTTCGGCGGC CCGCCCCGCCGCTCGTCCGGGCACGACAGCCTGAGGCGCTCGTCGATGGACTCGTCGTTC GGCTCAGCGACGAAGGGGAGGAGCGGGGCAGAGGAGAGGCCCGTGTTCGGGGACCGCACG AGCTCCGACCGGAGGAGGCAGCTCGGGCAGGAATTCTACAAGGACATATTCGCCGGGAGC GAGTCGATGTCACCTAGGCGGGGAGGCGCGGCGGGGGATCTGGATGTGTTTGGTGCGCAG GCCTCACCCGGTTCCACCAGCCGCCTGCATTCGAGCTTCTCCATGAAGTTCAACGGAGGC CTGGACAGTTCTGTCCCTACTTCTCCATCTCGGCATACATCCAACAAAAACGATGATGGA ATATCATATGCTTACAGTGTTCCAACTTCACCTAATTCATCCATGAACAGCTTTCTAGCC CAAGGGGCACCCCAACAAGATTCCACAAAGAATCCTTTTTCATGGCATCGCTATCCCTTC TTATCCCGGTTTCGCTCTAACAGTGGAGATAAGAAGGACACCTCCCATTATGTCAGCTCT ATGGACAGTGAATACGAAGGGACTCCTGTTAGCTTGGAAAGTAGCATTGCCAATAACAAG TTCCATTTTTCATTCTATAAATGGGGAGGGAAAGGTGCCGTTTTGGTATTGCCAACTACT GCACAGGAAAATGCTGGTGATATTGTTGGAGTAAGGAGTTTCCCTCAAGTGATTGTGCAA GGTATGGACCTAATTGATGAAGAAGATAGCACGTCAACTGCCACTGGAGCATCAAAGAGT CAGACTGATTACGAAGACTACAAATCTGGGAAAGATGTCTCGTTAGGGGCACTCTTAAAA ACCAAGGATGGAGCCCTTCCTTTAGCTTTTGATGACTACGTGCTAGGCGATAAATCTGAA GAATCAGGAACAAAACATAACACCAATAATGCAAAGAACAATGTATTAGGAGCTAGCCCC AGCTCTAAAAGTTCTCGGTCACCTTCAGGAGAGAAAAGTCGTGGCAGCAGAGTGAAAGGA AAAGTAAAGGACTTCATGAAAATATTTAGTCCTGAGAGTTCACCGAAGAGCAAACGAGAT CGGACATCCAGTGGGAAAAACGGAAGCAAAAGTGGTCCTGAAGATAAATTTAGCATATCC AATTCGGAGGTCGATGACAATGTCAGAACAGCCAATATGAACAAGCAGAATGTGTTCCCT CCTGTACCCTCTCCAATCAGCGAAGCACAAGACAGGACGGAGATACCGGTTTTTACAGTG GATAATGAAATGGATTCAAAGGCAGATTTTGGAAGAAAAGAAGTTACACCTCCCTCTTTT GATGAGTCAAGCGATGCCCAAACAAAATATAAGGTAGATGAGATAACAGATCTTGCGGAA GGTCCAGTGGAAGATCTTGAAGAATGTGTGGTTGAGGATGTCTCTGAAGATTTTATTCTT CGTAATAATGAGGAAAAAGAGCAAATAAAGATTTCTGAATCCAAAATCTGGGAATGGTCA AAGGGAAAAGAAGGAAATATTAGGTCATTGCTTTCTACACTACAATATGTTCTATGGCCT GAGAGTGGATGGAAACCAGTCCCCCTTGTTGATATAATTGAAGGAGCAGCTGTTAAGAAG GCCTATCAGAAGGCATTGTTATGCCTTCATCCAGATAAGTTGCAACAACGAGGAGCTGCT ATGCATCAGAAGTATATAGCAGAAAAGGTTTTTGACATTCTACAGGAGGCATGGAAAGAA TTCAATACAGTTACTTTTGGATAG

Peptide Sequence

PEP ID	Os03t0198300-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:5161669:5166608:1 gene:Os03g0198300 transcript:Os03t0198300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C25 description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os03t0198300-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os03t0198300-02)
Sequence	MAAAERPSRSDVDFADVFGGPPRRSSGHDSLRRSSMDSSFGSATKGRSGAEERPVFGDRT SSDRRRQLGQEFYKDIFAGSESMSPRRGGAAGDLDVFGAQASPGSTSRLHSSFSMKFNGG LDSSVPTSPSRHTSNKNDDGISYAYSVPTSPNSSMNSFLAQGAPQQDSTKNPFSWHRYPF LSRFRSNSGDKKDTSHYVSSMDSEYEGTPVSLESSIANNKFHFSFYKWGGKGAVLVLPTT AQENAGDIVGVRSFPQVIVQGMDLIDEEDSTSTATGASKSQTDYEDYKSGKDVSLGALLK TKDGALPLAFDDYVLGDKSEESGTKHNTNNAKNNVLGASPSSKSSRSPSGEKSRGSRVKG KVKDFMKIFSPESSPKSKRDRTSSGKNGSKSGPEDKFSISNSEVDDNVRTANMNKQNVFP PVPSPISEAQDRTEIPVFTVDNEMDSKADFGRKEVTPPSFDESSDAQTKYKVDEITDLAE GPVEDLEECVVEDVSEDFILRNNEEKEQIKISESKIWEWSKGKEGNIRSLLSTLQYVLWP ESGWKPVPLVDIIEGAAVKKAYQKALLCLHPDKLQQRGAAMHQKYIAEKVFDILQEAWKE FNTVTFG

Transcript Sequence

Transcript ID	Os03t0198300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5161669:5166608:1 gene:Os03g0198300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C25 description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os03t0198300-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os03t0198300-02)
Sequence	CCTCGACGACCGCCCGCTCGAAACAATCTCCCGCTGCGCTGCGGCGGCGCTTCGAGGGCA GGGCGGCATGGCGGCGGCGGAGCGCCCGAGCAGGTCCGACGTCGACTTCGCCGACGTCTT CGGCGGCCCGCCCCGCCGCTCGTCCGGGCACGACAGCCTGAGGCGCTCGTCGATGGACTC GTCGTTCGGCTCAGCGACGAAGGGGAGGAGCGGGGCAGAGGAGAGGCCCGTGTTCGGGGA CCGCACGAGCTCCGACCGGAGGAGGCAGCTCGGGCAGGAATTCTACAAGGACATATTCGC CGGGAGCGAGTCGATGTCACCTAGGCGGGGAGGCGCGGCGGGGGATCTGGATGTGTTTGG TGCGCAGGCCTCACCCGGTTCCACCAGCCGCCTGCATTCGAGCTTCTCCATGAAGTTCAA CGGAGGCCTGGACAGTTCTGTCCCTACTTCTCCATCTCGGCATACATCCAACAAAAACGA TGATGGAATATCATATGCTTACAGTGTTCCAACTTCACCTAATTCATCCATGAACAGCTT TCTAGCCCAAGGGGCACCCCAACAAGATTCCACAAAGAATCCTTTTTCATGGCATCGCTA TCCCTTCTTATCCCGGTTTCGCTCTAACAGTGGAGATAAGAAGGACACCTCCCATTATGT CAGCTCTATGGACAGTGAATACGAAGGGACTCCTGTTAGCTTGGAAAGTAGCATTGCCAA TAACAAGTTCCATTTTTCATTCTATAAATGGGGAGGGAAAGGTGCCGTTTTGGTATTGCC AACTACTGCACAGGAAAATGCTGGTGATATTGTTGGAGTAAGGAGTTTCCCTCAAGTGAT TGTGCAAGGTATGGACCTAATTGATGAAGAAGATAGCACGTCAACTGCCACTGGAGCATC AAAGAGTCAGACTGATTACGAAGACTACAAATCTGGGAAAGATGTCTCGTTAGGGGCACT CTTAAAAACCAAGGATGGAGCCCTTCCTTTAGCTTTTGATGACTACGTGCTAGGCGATAA ATCTGAAGAATCAGGAACAAAACATAACACCAATAATGCAAAGAACAATGTATTAGGAGC TAGCCCCAGCTCTAAAAGTTCTCGGTCACCTTCAGGAGAGAAAAGTCGTGGCAGCAGAGT GAAAGGAAAAGTAAAGGACTTCATGAAAATATTTAGTCCTGAGAGTTCACCGAAGAGCAA ACGAGATCGGACATCCAGTGGGAAAAACGGAAGCAAAAGTGGTCCTGAAGATAAATTTAG CATATCCAATTCGGAGGTCGATGACAATGTCAGAACAGCCAATATGAACAAGCAGAATGT GTTCCCTCCTGTACCCTCTCCAATCAGCGAAGCACAAGACAGGACGGAGATACCGGTTTT TACAGTGGATAATGAAATGGATTCAAAGGCAGATTTTGGAAGAAAAGAAGTTACACCTCC CTCTTTTGATGAGTCAAGCGATGCCCAAACAAAATATAAGGTAGATGAGATAACAGATCT TGCGGAAGGTCCAGTGGAAGATCTTGAAGAATGTGTGGTTGAGGATGTCTCTGAAGATTT TATTCTTCGTAATAATGAGGAAAAAGAGCAAATAAAGATTTCTGAATCCAAAATCTGGGA ATGGTCAAAGGGAAAAGAAGGAAATATTAGGTCATTGCTTTCTACACTACAATATGTTCT ATGGCCTGAGAGTGGATGGAAACCAGTCCCCCTTGTTGATATAATTGAAGGAGCAGCTGT TAAGAAGGCCTATCAGAAGGCATTGTTATGCCTTCATCCAGATAAGTTGCAACAACGAGG AGCTGCTATGCATCAGAAGTATATAGCAGAAAAGGTTTTTGACATTCTACAGGAGGCATG GAAAGAATTCAATACAGTTACTTTTGGATAGTATTCCTTAGATCCTATCGTTGTTTTGGC TCTATCATTCAGATATGGTGCTTGTTGTTGTCCACTTTAATGTACGGATGGTAATGCCCA GGATCACATTGGATATGGACATGGCCATGGGAGGCCATGATATGCATTTTTTTTTGAGGT ATTGCAGTCCTCTTGCAGTCTGGTGAATTGCACTGTATGAATTTGCTTGCCTAAATGTAA GTACTTAGAAAAATAGCAGTTCTTGTACAAATTTTCCGGTTGTGGCAAATAAACGGGTGT ATCCAGAGTATTGAAATTCTATAAATAGTGTGTGAGGCCTTTGTGTGTGTGTGTTGC