Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0197900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5150966:5152038:-1 gene:Os03g0197900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 8, ovate family protein 12, OVATE-domain containing protein 12 description:Protein of unknown function DUF623, plant domain containing protein. (Os03t0197900-01)
Sequence

ATGGCCAAGCGTCTCTTCCACTCGTGCCGCTCCCCCTCCGTGGCGGACGCCGTGGTCACC
TCCACCACTACCCTCCTCGCCACCGACCACCCACCTTTCTTCCCGGGCAGCTGCCCGCGC
CGTGTTCCCCGCCGCCGACCACAGCAGCCGCCTCCGGGTGCATGTGCCGCTGGCTATGCG
GCCGACGACCTCACACCGGCGCGCGGGACGCCTGCGTACCGCTGGCTTAAGAGCTCGCAG
TGGCACGTCATCGAGGCCGCCGGGATCACCGACGACGACCACACGCCTCGCCTCAAGATC
GACGCGCGGAGCCGGCTGCGGCGCTCTCGCCGCCGCCTGCACCGTCGGGCGGACCCCGTC
AGCGGGTCGTCGGGGGACAGCGGATGGTTCACCAGCGACGAGGACTCGTACGCGAACAGC
TGCGGCGTCGGCGTCGGCGGCGGCGAGGCCGAGACGCTGGTGACGTCGACCACCACGGAG
TCTTCGTCCGGCGCGAGCGGGAACTGCGGCGGCAGCGGCGAGGTGGACGGCGTAGTGGTG
GCCGGGAGCTTCGCGGTGGTGAAGCGCTCCGACGACCCCCGCGCCGACTTCCGCAGGTCC
ATGGCCGAGATGGTGGTGGGGCGCGCCATCTACGACGCCGACGGCCTCGAGCGCCTCCTG
CGGTGCTTCCTGGCGCTCAACCACCAGCGCCACCGCCGCGACATCGTCGCCGCCTTCGGC
GATGTGTGGGAGGCCGTCTTCTCCAACCCGACGTCGTCGCAGCGCCGCATTGTCACATCC
GACTCTGCGATCTGCAAGGCTGCAGCGACCGTGTCAAACCGTCGGTAG

Peptide Sequence

PEP ID

Os03t0197900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5150966:5152038:-1 gene:Os03g0197900 transcript:Os03t0197900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 8, ovate family protein 12, OVATE-domain containing protein 12 description:Protein of unknown function DUF623, plant domain containing protein. (Os03t0197900-01)
Sequence

MAKRLFHSCRSPSVADAVVTSTTTLLATDHPPFFPGSCPRRVPRRRPQQPPPGACAAGYA
ADDLTPARGTPAYRWLKSSQWHVIEAAGITDDDHTPRLKIDARSRLRRSRRRLHRRADPV
SGSSGDSGWFTSDEDSYANSCGVGVGGGEAETLVTSTTTESSSGASGNCGGSGEVDGVVV
AGSFAVVKRSDDPRADFRRSMAEMVVGRAIYDADGLERLLRCFLALNHQRHRRDIVAAFG
DVWEAVFSNPTSSQRRIVTSDSAICKAAATVSNRR

Transcript Sequence

Transcript ID

Os03t0197900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5150966:5152038:-1 gene:Os03g0197900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 8, ovate family protein 12, OVATE-domain containing protein 12 description:Protein of unknown function DUF623, plant domain containing protein. (Os03t0197900-01)
Sequence

AATATCCGCCAACGCCACTTCCCCCGCACCTTACCGTCCACGCCACCGTCCTCCCTCCCG
GACTCCCCGCAGCGTTGCCCCCTCTTCCATGGCCAAGCGTCTCTTCCACTCGTGCCGCTC
CCCCTCCGTGGCGGACGCCGTGGTCACCTCCACCACTACCCTCCTCGCCACCGACCACCC
ACCTTTCTTCCCGGGCAGCTGCCCGCGCCGTGTTCCCCGCCGCCGACCACAGCAGCCGCC
TCCGGGTGCATGTGCCGCTGGCTATGCGGCCGACGACCTCACACCGGCGCGCGGGACGCC
TGCGTACCGCTGGCTTAAGAGCTCGCAGTGGCACGTCATCGAGGCCGCCGGGATCACCGA
CGACGACCACACGCCTCGCCTCAAGATCGACGCGCGGAGCCGGCTGCGGCGCTCTCGCCG
CCGCCTGCACCGTCGGGCGGACCCCGTCAGCGGGTCGTCGGGGGACAGCGGATGGTTCAC
CAGCGACGAGGACTCGTACGCGAACAGCTGCGGCGTCGGCGTCGGCGGCGGCGAGGCCGA
GACGCTGGTGACGTCGACCACCACGGAGTCTTCGTCCGGCGCGAGCGGGAACTGCGGCGG
CAGCGGCGAGGTGGACGGCGTAGTGGTGGCCGGGAGCTTCGCGGTGGTGAAGCGCTCCGA
CGACCCCCGCGCCGACTTCCGCAGGTCCATGGCCGAGATGGTGGTGGGGCGCGCCATCTA
CGACGCCGACGGCCTCGAGCGCCTCCTGCGGTGCTTCCTGGCGCTCAACCACCAGCGCCA
CCGCCGCGACATCGTCGCCGCCTTCGGCGATGTGTGGGAGGCCGTCTTCTCCAACCCGAC
GTCGTCGCAGCGCCGCATTGTCACATCCGACTCTGCGATCTGCAAGGCTGCAGCGACCGT
GTCAAACCGTCGGTAGAAAACAAACATGCATGTGATACGTATAGCAACGGACTAGGCCTA
TTACTGTACTAGTAGCTGTATCTAAGATGTGATTATGGAGAGGTAGTATGAGTACGTGTA
GACGGATGTACATTAGTACTGTACGAGCAAATTTCTTTTTTTGGGTTCGTGTC