Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0197800-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:5134409:5137441:1 gene:Os03g0197800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 1 description:Similar to Zinc finger, C2H2 type family protein, expressed. (Os03t0197800-00)
Sequence	ATGGAGGTCGAGACGTCGTCCGGGACGGCCGAGCGCGGGGCGGGCGCGGGCGCGCAGCAG CAGCCTCCGCCGCAGCCGCAGCCGCAGCCGCCGGCCAAGAAGAAGCGTGCACTCCCCGGC ATGCCAGATCCTGATGCGGAGGTGATCGCGCTGTCGCCCAAGACGCTGCTGGCGACGAAC AGGTTCGTTTGCGAGATCTGCAACAAGGGGTTCCAGCGCGACCAGAACCTGCAGCTGCAC CGGCGCGGGCACAACCTGCCGTGGAAGCTGCGGCAGCGGAGCGGGAAGGAGGTGCGGAAG CGGGTGTACGTGTGCCCGGAGCCGACGTGCGTGCACCACGACCCGTCGCGGGCGCTCGGC GACCTCACCGGCATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGC GACAAGTGCTCCAAGAAGTACGCCGTCCAGTCCGACTGGAAGGCGCACACCAAGACCTGC GGCTCCCGCGAGTACCGCTGCGACTGCGGCACCTTATTCTCACGGAGGGACAGCTTCATC ACCCACCGCGCCTTCTGCGACGCCCTGGCCGAGGAGAGCGCCAAGGCGCGCGCGGCGCCG CCGCCGCCGGCCGACGAGGACGGGACCTCGGCTTCTGCCGGTGCGCCGCCGCCGCAAGCG CCTCTACCACCACCCGCGCCGGTGCCGGCGCCAGCACCGCCACCTCCTCCGGCCGCAGCT CCGGCTCCCGCGGCGCAACCGGAGCAACGAGATCGGGATGCTGCACTGGATCAGTTCGCC ACGCCGGCGCCGGCGCCGGCGCCGCCGCCAGTTACTGCTCCTCCGCCGCCGCCGGTTGCC GCTCCTAATGATTGTGTCAGCAGCAGCAGTAGCGGCGTGGCGCCGACGTCGCAAAGCCTC CTTAGCAGCATGTTTGCACCGCCGTCGGTGGCCCAGGCGCCGCAGTACGCGGACCCCATC GGAGTTGGAGCGGGTGGCCATCAGGAGCGCGCGGTGCCTGCCAAGCCTCCGGCGCTGTGC CTCGCGCCCAACGCGTCGTCGTCGCTGTTTACGGCGCCTGTACCAGCTGACCGGCAGCAG TTCGCTCCGCCGCCACCGCCGTCCCCGTCGCCGCACATGTCCGCCACGGCGTTGCTTCAG AAGGCCGCGCAGATGGGCGCCACCTCGTCTAGCTCGTCCTTTCTCCGCTGCCTGGGCCTC GACATGTCATCGTCATCGTCGGCGCCGCCTTCGTCGTCAGGGCAGCAGCAACAGCACCAC CACCATCACCACCAAGAAACCATGCAAGTGCCACTCCCGGCGAGTTCGCTGCCCGAATGG CCGCCGCGGTTACAGCCGGAGCCATCCCCAATGCTGTCCTCCGGGCTCGGCCTCGGGTTA CCATACGACGCGACAGGCGGTCCGGTGAGCTTGCCGGAGCTCATGATGGGTCAGTCCACA CTGTTCAGTGCCAAGCCGGCAACACTAGATTTCTTGGGGCTTGGAGTGAGCCCGACAGGC GCGTCGACAAGCAGGGGCTTCCCGACATTCATCCAACCCATCGGCGGCGCTGTCAGCTTG GCCGGGAGTGCCACCGTCGCCGCGGAGACCTTCGGCGCCGCCCATGGCGGCCAGGCAAAT CCGTGGGAGAGGAACCCGAGTAGCTCACCAATCCTGTAA

Peptide Sequence

PEP ID	Os03t0197800-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:5134409:5137441:1 gene:Os03g0197800 transcript:Os03t0197800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 1 description:Similar to Zinc finger, C2H2 type family protein, expressed. (Os03t0197800-00)
Sequence	MEVETSSGTAERGAGAGAQQQPPPQPQPQPPAKKKRALPGMPDPDAEVIALSPKTLLATN RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRVYVCPEPTCVHHDPSRALG DLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGSREYRCDCGTLFSRRDSFI THRAFCDALAEESAKARAAPPPPADEDGTSASAGAPPPQAPLPPPAPVPAPAPPPPPAAA PAPAAQPEQRDRDAALDQFATPAPAPAPPPVTAPPPPPVAAPNDCVSSSSSGVAPTSQSL LSSMFAPPSVAQAPQYADPIGVGAGGHQERAVPAKPPALCLAPNASSSLFTAPVPADRQQ FAPPPPPSPSPHMSATALLQKAAQMGATSSSSSFLRCLGLDMSSSSSAPPSSSGQQQQHH HHHHQETMQVPLPASSLPEWPPRLQPEPSPMLSSGLGLGLPYDATGGPVSLPELMMGQST LFSAKPATLDFLGLGVSPTGASTSRGFPTFIQPIGGAVSLAGSATVAAETFGAAHGGQAN PWERNPSSSPIL

Transcript Sequence

Transcript ID	Os03t0197800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5134409:5137441:1 gene:Os03g0197800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 1 description:Similar to Zinc finger, C2H2 type family protein, expressed. (Os03t0197800-00)
Sequence	CGGTGACCGGTAGCTCGGTGTCGCCCCCACCGTCCGGCCTGCGTTGCAAAGGCGTGACGC GAGCTTTTATGCTCGAGGCAGCTTGCTTCTTGGACGCTAGTAGCAGCAGCATCGGCGGGA GTGGTACCCGCGTCCACGGAACTTCTGCAAAAGAAAGATTCTCGGATGGAGGTCGAGACG TCGTCCGGGACGGCCGAGCGCGGGGCGGGCGCGGGCGCGCAGCAGCAGCCTCCGCCGCAG CCGCAGCCGCAGCCGCCGGCCAAGAAGAAGCGTGCACTCCCCGGCATGCCAGATCCTGAT GCGGAGGTGATCGCGCTGTCGCCCAAGACGCTGCTGGCGACGAACAGGTTCGTTTGCGAG ATCTGCAACAAGGGGTTCCAGCGCGACCAGAACCTGCAGCTGCACCGGCGCGGGCACAAC CTGCCGTGGAAGCTGCGGCAGCGGAGCGGGAAGGAGGTGCGGAAGCGGGTGTACGTGTGC CCGGAGCCGACGTGCGTGCACCACGACCCGTCGCGGGCGCTCGGCGACCTCACCGGCATC AAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAG AAGTACGCCGTCCAGTCCGACTGGAAGGCGCACACCAAGACCTGCGGCTCCCGCGAGTAC CGCTGCGACTGCGGCACCTTATTCTCACGGAGGGACAGCTTCATCACCCACCGCGCCTTC TGCGACGCCCTGGCCGAGGAGAGCGCCAAGGCGCGCGCGGCGCCGCCGCCGCCGGCCGAC GAGGACGGGACCTCGGCTTCTGCCGGTGCGCCGCCGCCGCAAGCGCCTCTACCACCACCC GCGCCGGTGCCGGCGCCAGCACCGCCACCTCCTCCGGCCGCAGCTCCGGCTCCCGCGGCG CAACCGGAGCAACGAGATCGGGATGCTGCACTGGATCAGTTCGCCACGCCGGCGCCGGCG CCGGCGCCGCCGCCAGTTACTGCTCCTCCGCCGCCGCCGGTTGCCGCTCCTAATGATTGT GTCAGCAGCAGCAGTAGCGGCGTGGCGCCGACGTCGCAAAGCCTCCTTAGCAGCATGTTT GCACCGCCGTCGGTGGCCCAGGCGCCGCAGTACGCGGACCCCATCGGAGTTGGAGCGGGT GGCCATCAGGAGCGCGCGGTGCCTGCCAAGCCTCCGGCGCTGTGCCTCGCGCCCAACGCG TCGTCGTCGCTGTTTACGGCGCCTGTACCAGCTGACCGGCAGCAGTTCGCTCCGCCGCCA CCGCCGTCCCCGTCGCCGCACATGTCCGCCACGGCGTTGCTTCAGAAGGCCGCGCAGATG GGCGCCACCTCGTCTAGCTCGTCCTTTCTCCGCTGCCTGGGCCTCGACATGTCATCGTCA TCGTCGGCGCCGCCTTCGTCGTCAGGGCAGCAGCAACAGCACCACCACCATCACCACCAA GAAACCATGCAAGTGCCACTCCCGGCGAGTTCGCTGCCCGAATGGCCGCCGCGGTTACAG CCGGAGCCATCCCCAATGCTGTCCTCCGGGCTCGGCCTCGGGTTACCATACGACGCGACA GGCGGTCCGGTGAGCTTGCCGGAGCTCATGATGGGTCAGTCCACACTGTTCAGTGCCAAG CCGGCAACACTAGATTTCTTGGGGCTTGGAGTGAGCCCGACAGGCGCGTCGACAAGCAGG GGCTTCCCGACATTCATCCAACCCATCGGCGGCGCTGTCAGCTTGGCCGGGAGTGCCACC GTCGCCGCGGAGACCTTCGGCGCCGCCCATGGCGGCCAGGCAAATCCGTGGGAGAGGAAC CCGAGTAGCTCACCAATCCTGTAATAGCACTAGCTAGCTAGCAACTGGTAGCAATTAGCA CCAAGTAGCAAACCACTGTGAATTCGACACATGCAGCACGAAGTAAGACGGTGAAAATAG TGGAAGCAGCCAGGTTCAGTTAGCAATTTAGCAGTATCTTCCAACTTTTGTTTGTTTCCT TTGACCAACGTCGTTCTTTTGTTTATTTAGCTTAGTACGAAGTTACAAGTGAGTTTCTTT TGTTGTTCACGGCCTCTCTTCTCCTGTGCTGTCTTTTGCATTTGTTTGTTCTCGTTCGCC TCCTTGCTCTTGTCCTGTAGCTGCCACTGCCTCTGCATTTAAACACAGCACTAGAGCAGT ACATTTGGTGGATACGGGAATTAAAT