Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0197400-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:5119308:5124569:-1 gene:Os03g0197400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to COP9 signalosome complex subunit 4 (Signalosome subunit 4) (Constitutive photomorphogenesis protein 8) (FUSCA protein 4) (FUSCA4) (AtS4). (Os03t0197400-01);Similar to COP9 signalosome complex subunit 4 (Signalosome subunit 4) (Constitutive photomorphogenesis protein 8) (FUSCA protein 4) (FUSCA4) (AtS4). (Os03t0197400-02)
Sequence	ATGGACAACGCCCTCGCGAGCGCCGCGGCGATCGCCGACCAGCGCCAGAAGATCGAGCAG TACCGCCACATCCTCTCCTCCGTCCTCTCGTTTTCCCCGCCGGACATCTCGCAGGCGAAG CGCTTCCTCGACCACATGGTTTCCGACGAGGTGCCGCTCGTGGTGTCGCGGCAGCTGCTG CAGACGTTCGCCCAGGAGCTTGGGAGGTTGGAGCCAGAGGCTCAGAAGGAGGTCGCGCAC TACGCGCTCACGCAGATCCAGCCTCGTGTGGTCTCCTTCGAGGAGCAGGTGGTAGTGATT AGAGAGAAGCTTGCAGAACTGTATGAGTCTGAACAACAATGGTCAAAAGCTGCACAGATG CTTAGTGGGATTGACTTGGACTCAGGGATCAGGATGCTGGATGACACAAACAAATTATCC AAATGTGTCCAGATTGCACGACTTTATTTAGAGGATGATGATTCTGTTAATGCTGAAGCT TTTATTAACAAAGCTTCATTTTTGGTAACAAACAGTCACCAAGAACTTCTGAACTTACAG TACAAGGTATGCTACGCTAGAATTTTGGATCTGAAGAGAAGATTCTTGGAAGCTGCACTT CGATACTATGACATCTCTCAGATTGAACAACGCCAAATTGGTGACGAAGAGATCGATGAA AATGCTTTGGAGCAAGCTCTTAGTGCTGCTGTGACATGCACAATATTGGCTGGTGCTGGT CCGCAACGATCTCGTGTTCTTGCTACATTGTACAAGGATGAGAGATGCTCAAAGTTGAAG ATATACCCAATACTGCAGAAGGTCTTTCTTGAAAGGATTTTGAGGAAACCAGAAATTGAA GCATTTGCAGAGGAGCTGAGACCGCATCAAAAAGCTCTGTTACCAGATAAGTCTACTGTG CTTGACCGGGCAATGATTGAGCATAACCTCCTTAGTGCCAGTAAACTTTACACTAATATC AGCTTTGATGAGCTTGGAGCATTATTGGGCATTGACCCTAGGAAGGCTGAAAAGATAGCA TCGCGAATGATTTATGAAGATAGGATGCGAGGTTCAATTGATCAGGTTGAAGCTGTGATA CATTTTGAGGATGACACTGAAGAGCTGCAGCAGTGGGACCAACAGATTGCGGGACTGTGC CAAGCGCTGAACGACATTCTGGACAGCATGTCAAGCAAGGGAATGGCTATTCCTGTGTGA

Peptide Sequence

PEP ID	Os03t0197400-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:5119308:5124569:-1 gene:Os03g0197400 transcript:Os03t0197400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to COP9 signalosome complex subunit 4 (Signalosome subunit 4) (Constitutive photomorphogenesis protein 8) (FUSCA protein 4) (FUSCA4) (AtS4). (Os03t0197400-01);Similar to COP9 signalosome complex subunit 4 (Signalosome subunit 4) (Constitutive photomorphogenesis protein 8) (FUSCA protein 4) (FUSCA4) (AtS4). (Os03t0197400-02)
Sequence	MDNALASAAAIADQRQKIEQYRHILSSVLSFSPPDISQAKRFLDHMVSDEVPLVVSRQLL QTFAQELGRLEPEAQKEVAHYALTQIQPRVVSFEEQVVVIREKLAELYESEQQWSKAAQM LSGIDLDSGIRMLDDTNKLSKCVQIARLYLEDDDSVNAEAFINKASFLVTNSHQELLNLQ YKVCYARILDLKRRFLEAALRYYDISQIEQRQIGDEEIDENALEQALSAAVTCTILAGAG PQRSRVLATLYKDERCSKLKIYPILQKVFLERILRKPEIEAFAEELRPHQKALLPDKSTV LDRAMIEHNLLSASKLYTNISFDELGALLGIDPRKAEKIASRMIYEDRMRGSIDQVEAVI HFEDDTEELQQWDQQIAGLCQALNDILDSMSSKGMAIPV

Transcript Sequence

Transcript ID	Os03t0197400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:5119308:5124569:-1 gene:Os03g0197400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to COP9 signalosome complex subunit 4 (Signalosome subunit 4) (Constitutive photomorphogenesis protein 8) (FUSCA protein 4) (FUSCA4) (AtS4). (Os03t0197400-01);Similar to COP9 signalosome complex subunit 4 (Signalosome subunit 4) (Constitutive photomorphogenesis protein 8) (FUSCA protein 4) (FUSCA4) (AtS4). (Os03t0197400-02)
Sequence	CCCCCAAAACCCTAGGCCCCCCTTCTCCTCCGACGCCGGCTACAGTCTCCGACCCCTCCG GCGCAATCGCGGAATCGGAGGCGGCGGGCGGCGCCATGGACAACGCCCTCGCGAGCGCCG CGGCGATCGCCGACCAGCGCCAGAAGATCGAGCAGTACCGCCACATCCTCTCCTCCGTCC TCTCGTTTTCCCCGCCGGACATCTCGCAGGCGAAGCGCTTCCTCGACCACATGGTTTCCG ACGAGGTGCCGCTCGTGGTGTCGCGGCAGCTGCTGCAGACGTTCGCCCAGGAGCTTGGGA GGTTGGAGCCAGAGGCTCAGAAGGAGGTCGCGCACTACGCGCTCACGCAGATCCAGCCTC GTGTGGTCTCCTTCGAGGAGCAGGTGGTAGTGATTAGAGAGAAGCTTGCAGAACTGTATG AGTCTGAACAACAATGGTCAAAAGCTGCACAGATGCTTAGTGGGATTGACTTGGACTCAG GGATCAGGATGCTGGATGACACAAACAAATTATCCAAATGTGTCCAGATTGCACGACTTT ATTTAGAGGATGATGATTCTGTTAATGCTGAAGCTTTTATTAACAAAGCTTCATTTTTGG TAACAAACAGTCACCAAGAACTTCTGAACTTACAGTACAAGGTATGCTACGCTAGAATTT TGGATCTGAAGAGAAGATTCTTGGAAGCTGCACTTCGATACTATGACATCTCTCAGATTG AACAACGCCAAATTGGTGACGAAGAGATCGATGAAAATGCTTTGGAGCAAGCTCTTAGTG CTGCTGTGACATGCACAATATTGGCTGGTGCTGGTCCGCAACGATCTCGTGTTCTTGCTA CATTGTACAAGGATGAGAGATGCTCAAAGTTGAAGATATACCCAATACTGCAGAAGGTCT TTCTTGAAAGGATTTTGAGGAAACCAGAAATTGAAGCATTTGCAGAGGAGCTGAGACCGC ATCAAAAAGCTCTGTTACCAGATAAGTCTACTGTGCTTGACCGGGCAATGATTGAGCATA ACCTCCTTAGTGCCAGTAAACTTTACACTAATATCAGCTTTGATGAGCTTGGAGCATTAT TGGGCATTGACCCTAGGAAGGCTGAAAAGATAGCATCGCGAATGATTTATGAAGATAGGA TGCGAGGTTCAATTGATCAGGTTGAAGCTGTGATACATTTTGAGGATGACACTGAAGAGC TGCAGCAGTGGGACCAACAGATTGCGGGACTGTGCCAAGCGCTGAACGACATTCTGGACA GCATGTCAAGCAAGGGAATGGCTATTCCTGTGTGAGCTCTTCAAGTTGCTTCGATGGTAC TCGTGAGAACTGTGGTCACGGCGTCAGGCCTCACGGACATTTTGTACAGATGTTCGCAGC TGCGAGTACCAGTCATGTTTCGGAACGAATTTTGGCCACAATTAGTCGGTGATCGGTACA TGTGAAGTTGTGAACTGCTGGATAGATTAAGGCAGTGGCGCCGTAATGGCATTATATCAC AAACCAAAATTGATCGTGAT