Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0197200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5112964:5114038:1 gene:Os03g0197200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sorbitol transporter. (Os03t0197200-01)
Sequence

ACCTCCGACTCGCCGGCCGAGGCCGAGGAGCGGCTCGCGGACATCAAGAACGCGGTCGGC
ATCCCCGAAGGGATCTCCGACGAGGACGAAGTTGTAGCCGTCGTCCACAAGAGCAGGGGC
TCCCACGGCGAGGGTGTCTGGAGGGACCTGCTGCTCCGCCCGACGCCGGCCGTGCGCCGC
ATACTCATCGCCTGCCTCGGCCTCCAGTTCTTCCAGCAAGCCTCCGGCATCGACGCCGTC
GTGCTGTACAGCCCGCGGGTGTTCGACAACGCGGGCCTCCACTCCGACTCCGACTCCATC
GGAGCCTCCGTGGCGGTGGGCGCCAGCAAGACGCTCTTCATCCTCGTGGCCACGTTCCTC
CTCGACCGCGTCGGCCGGAGGCCGCTGCTCCTCACCAGCGCCGGCGGGATGGTGATCTCG
CTCGTCACGCTGGCCTCGGCGCTGCACATGATCGAGCACCGCCCGGAGGGCCAGGCGACG
GCGCTGGTGGGTCTGAGCATCGCGATGGTGCTGGTGTTCGTGGCGTCCTTCTCCATCGGG
ATGGGCCCGATCGCGTGGGTGTACAGCTCGGAGATCTTCCCGCTGCGGCTGCGCGCGCAG
GGATGCGCGCTCGGCACGGCGATGAACCGGGTCGTGAGCGGCGCCGTCAGCATGTCCTTC
ATCTCGCTCTACAAGGCCATCACCTTCGCCGGGAGCTTCTACCTCTACGCCGGCATAGCT
GCGGCCGGGTGGGTGTTCATGTTCTTCTTCCTGCCGGAGACGCAAGGCAGGAGCCTGGAG
GACACCGTCAAACTCTTCGGCGGCGATGAACGTGACGCGAACGGTACTGTGGGAAGGGAA
GACGGCCATGGGCAGAACAAGTCCACTGAGTTGACTACTCAGCAGTGA

Peptide Sequence

PEP ID

Os03t0197200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5112964:5114038:1 gene:Os03g0197200 transcript:Os03t0197200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sorbitol transporter. (Os03t0197200-01)
Sequence

TSDSPAEAEERLADIKNAVGIPEGISDEDEVVAVVHKSRGSHGEGVWRDLLLRPTPAVRR
ILIACLGLQFFQQASGIDAVVLYSPRVFDNAGLHSDSDSIGASVAVGASKTLFILVATFL
LDRVGRRPLLLTSAGGMVISLVTLASALHMIEHRPEGQATALVGLSIAMVLVFVASFSIG
MGPIAWVYSSEIFPLRLRAQGCALGTAMNRVVSGAVSMSFISLYKAITFAGSFYLYAGIA
AAGWVFMFFFLPETQGRSLEDTVKLFGGDERDANGTVGREDGHGQNKSTELTTQQ

Transcript Sequence

Transcript ID

Os03t0197200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5112964:5114038:1 gene:Os03g0197200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sorbitol transporter. (Os03t0197200-01)
Sequence

AGACCTCCGACTCGCCGGCCGAGGCCGAGGAGCGGCTCGCGGACATCAAGAACGCGGTCG
GCATCCCCGAAGGGATCTCCGACGAGGACGAAGTTGTAGCCGTCGTCCACAAGAGCAGGG
GCTCCCACGGCGAGGGTGTCTGGAGGGACCTGCTGCTCCGCCCGACGCCGGCCGTGCGCC
GCATACTCATCGCCTGCCTCGGCCTCCAGTTCTTCCAGCAAGCCTCCGGCATCGACGCCG
TCGTGCTGTACAGCCCGCGGGTGTTCGACAACGCGGGCCTCCACTCCGACTCCGACTCCA
TCGGAGCCTCCGTGGCGGTGGGCGCCAGCAAGACGCTCTTCATCCTCGTGGCCACGTTCC
TCCTCGACCGCGTCGGCCGGAGGCCGCTGCTCCTCACCAGCGCCGGCGGGATGGTGATCT
CGCTCGTCACGCTGGCCTCGGCGCTGCACATGATCGAGCACCGCCCGGAGGGCCAGGCGA
CGGCGCTGGTGGGTCTGAGCATCGCGATGGTGCTGGTGTTCGTGGCGTCCTTCTCCATCG
GGATGGGCCCGATCGCGTGGGTGTACAGCTCGGAGATCTTCCCGCTGCGGCTGCGCGCGC
AGGGATGCGCGCTCGGCACGGCGATGAACCGGGTCGTGAGCGGCGCCGTCAGCATGTCCT
TCATCTCGCTCTACAAGGCCATCACCTTCGCCGGGAGCTTCTACCTCTACGCCGGCATAG
CTGCGGCCGGGTGGGTGTTCATGTTCTTCTTCCTGCCGGAGACGCAAGGCAGGAGCCTGG
AGGACACCGTCAAACTCTTCGGCGGCGATGAACGTGACGCGAACGGTACTGTGGGAAGGG
AAGACGGCCATGGGCAGAACAAGTCCACTGAGTTGACTACTCAGCAGTGAGCCAGTAACC
AGTGAGGACTACTAGTACAGTAGTACATGATCTACTCAGCAGTGACCAGTGAGGGCTACT
AGTACATACCCTCCGTAGGAAATCGAGTCAAACTTTGAAAATATAAATCATAAGTAACTC
TTAAGTTGTTGAGTTTGAAAATGTAAAAATTATATGAATAGGTTTATCTTGAAAA