Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0197000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:5085664:5090353:-1 gene:Os03g0197000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase-like domain containing protein. (Os03t0197000-01)
Sequence

ATGCAGCAGATGTCTCGACCATCAGTGATTATCAAGCTGATTCTGGGGTTGCTTTGGTTC
ATCGTCCACTTAGCAATCAGCCTTTGCAGTTTATGGTTTGATCTGATCTACAGTATAGAA
TGCTATCTCATTTCATTCGGGCTGATTCCAAAGTATCGGAAATTCCAACTGGATAGGCTC
AAACACTTGGCTGTTGTGGTAGATAGCAGAGAAGCTAAAAATGTTGCAAAGATCAATCAG
CTCTTATGTTGGCTCTCAAATGTTGGTGTGAAGTATGTATGTCTTTATGACATTGATGGA
GTGCTGAAGAAAACATTTGCACCTGCTATGAATGGTTCAAGATATGGGAATTCAGGAAAA
TATCTGGATGTGGGTGCAAATACAAAAGCTTTGACCTGTTGTCATAAAGAGATGACAATA
GAGTGTATTTCTGGTTCTGATGGCAAGGATGGGATTGCTAAAGCAGCCAGCTTACTTTGC
TCAACTTGTGTGAACGGCAATAGGAATACTTGTGGAAATGGTGAAATAGTATTTACAGAA
GCTGACATGTCCGGTGCATTGAAAGCAATAGGTTGTGGTGGACCAGAACCTGATCTTCTT
CTTGTGTATGGCCCTGCTAGATGCCATTTAGGTTTTCCTGCATGGAGATTGCGGTATACT
GAGATAATGCATATGGGACCACTGAATTCAATGAAATATGGCGCCATTGTGAAAGCATTC
TATAAATTCTCGAAGAAATACCAAAATTTTGGTAAATGA

Peptide Sequence

PEP ID

Os03t0197000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:5085664:5090353:-1 gene:Os03g0197000 transcript:Os03t0197000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase-like domain containing protein. (Os03t0197000-01)
Sequence

MQQMSRPSVIIKLILGLLWFIVHLAISLCSLWFDLIYSIECYLISFGLIPKYRKFQLDRL
KHLAVVVDSREAKNVAKINQLLCWLSNVGVKYVCLYDIDGVLKKTFAPAMNGSRYGNSGK
YLDVGANTKALTCCHKEMTIECISGSDGKDGIAKAASLLCSTCVNGNRNTCGNGEIVFTE
ADMSGALKAIGCGGPEPDLLLVYGPARCHLGFPAWRLRYTEIMHMGPLNSMKYGAIVKAF
YKFSKKYQNFGK

Transcript Sequence

Transcript ID

Os03t0197000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:5085664:5090353:-1 gene:Os03g0197000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase-like domain containing protein. (Os03t0197000-01)
Sequence

ATCGGCCTGATTATTTTTCGTATTTTTCTACTCCACCTTTCGTCTTCGAAGTCCTCCTCC
AGATCGTGAGTGAATTGGGGAAAACAAACCTCTCTCCATCACCGGCCGCAGCAGCCGCCT
CCGCCTCCGCCTCCGCCCGCACCAGATGCGACGCTGACCGGCTCACCGGCGGAAGCGCGG
CAGCGGCGCGGCCTTCGGTTCGAGCGGTAGCATGCAGCAGATGTCTCGACCATCAGTGAT
TATCAAGCTGATTCTGGGGTTGCTTTGGTTCATCGTCCACTTAGCAATCAGCCTTTGCAG
TTTATGGTTTGATCTGATCTACAGTATAGAATGCTATCTCATTTCATTCGGGCTGATTCC
AAAGTATCGGAAATTCCAACTGGATAGGCTCAAACACTTGGCTGTTGTGGTAGATAGCAG
AGAAGCTAAAAATGTTGCAAAGATCAATCAGCTCTTATGTTGGCTCTCAAATGTTGGTGT
GAAGTATGTATGTCTTTATGACATTGATGGAGTGCTGAAGAAAACATTTGCACCTGCTAT
GAATGGTTCAAGATATGGGAATTCAGGAAAATATCTGGATGTGGGTGCAAATACAAAAGC
TTTGACCTGTTGTCATAAAGAGATGACAATAGAGTGTATTTCTGGTTCTGATGGCAAGGA
TGGGATTGCTAAAGCAGCCAGCTTACTTTGCTCAACTTGTGTGAACGGCAATAGGAATAC
TTGTGGAAATGGTGAAATAGTATTTACAGAAGCTGACATGTCCGGTGCATTGAAAGCAAT
AGGTTGTGGTGGACCAGAACCTGATCTTCTTCTTGTGTATGGCCCTGCTAGATGCCATTT
AGGTTTTCCTGCATGGAGATTGCGGTATACTGAGATAATGCATATGGGACCACTGAATTC
AATGAAATATGGCGCCATTGTGAAAGCATTCTATAAATTCTCGAAGAAATACCAAAATTT
TGGTAAATGAGAGCTGATACTGAGATAGAGAAGACAACATGTCATGTGTAGAAAGCCACT
CCTGGAGCTGGAAGCTTAACAATAGTTTTGCCTTTCTTTTTCTTTTTATCCCATGTTGCT
GATCACTATACTAAACGTTACGAGCAATAATTCACAGATACACCTTGTACTTGCTTTTGC
AATATTGTAAGTGTTGCTGATAGAACATACGGGAAATTATATCCCATTGTATAACTTGCT
CCCATTCTAATGTGTGATGAGGCAGTTCTTGACCAC