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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0194500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4909687:4912354:1 gene:Os03g0194500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein translocase/ protein transporter. (Os03t0194500-01)
Sequence

ATGGCGGCGAAACGCGGGAGCGAGTCGGACGGCGACGAGCTCGGCGGCGGCGGCGCCGCC
GAGGGAACCAGCCCCAACGACGGGGGCGCGTCTCCGCCTCCCCTCGCCGCCGCGCCCGCC
GTATGCTTCATCCGCTCCGCCGGAGACTTCGCCGGTGGCGCCTTCATCGGATCTATCGTC
GGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCATTCAGCACCGCAGGG
TCTTCTGCCAAGACTTTTGCAGTTCTCTCTGGCGTCCAGAGTCTGGTTGTGTGCTTGTTG
AGAAGGCTGCGCGGCAAAGATGACATTGTTAATGCTGGGATAGCTGGTTGTTGCACTGGC
CTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGCTGTGCAACCTTTGCA
GCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCAATGGCACAGACACTT
GGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTCCCACCATTCACTCTG
CCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAGCCCTTAGTACTAAAG
CCGAAGCACTAG

Peptide Sequence

PEP ID

Os03t0194500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4909687:4912354:1 gene:Os03g0194500 transcript:Os03t0194500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein translocase/ protein transporter. (Os03t0194500-01)
Sequence

MAAKRGSESDGDELGGGGAAEGTSPNDGGASPPPLAAAPAVCFIRSAGDFAGGAFIGSIV
GYGQGLFTKKGFKGSFSTAGSSAKTFAVLSGVQSLVVCLLRRLRGKDDIVNAGIAGCCTG
LALSFPGTPQALLQSCATFAAFSCIMEGLNKQQAAMAQTLGGSALTVSHQNGGVLPPFTL
PPLLDASDALSSCCQPLVLKPKH

Transcript Sequence

Transcript ID

Os03t0194500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4909687:4912354:1 gene:Os03g0194500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein translocase/ protein transporter. (Os03t0194500-01)
Sequence

GTGTTGTGAGCAGCGATGGCGGCGAAACGCGGGAGCGAGTCGGACGGCGACGAGCTCGGC
GGCGGCGGCGCCGCCGAGGGAACCAGCCCCAACGACGGGGGCGCGTCTCCGCCTCCCCTC
GCCGCCGCGCCCGCCGTATGCTTCATCCGCTCCGCCGGAGACTTCGCCGGTGGCGCCTTC
ATCGGATCTATCGTCGGATATGGACAAGGTTTGTTCACTAAGAAGGGATTTAAGGGCTCA
TTCAGCACCGCAGGGTCTTCTGCCAAGACTTTTGCAGTTCTCTCTGGCGTCCAGAGTCTG
GTTGTGTGCTTGTTGAGAAGGCTGCGCGGCAAAGATGACATTGTTAATGCTGGGATAGCT
GGTTGTTGCACTGGCCTTGCTTTGAGCTTTCCAGGAACACCACAAGCCTTGCTCCAAAGC
TGTGCAACCTTTGCAGCATTCTCATGCATCATGGAGGGGCTCAACAAACAGCAGGCTGCA
ATGGCACAGACACTTGGTGGGAGTGCTTTGACCGTTTCACACCAGAATGGTGGCGTTCTC
CCACCATTCACTCTGCCACCACTTCTTGATGCATCAGATGCTTTATCTTCATGCTGCCAG
CCCTTAGTACTAAAGCCGAAGCACTAGACTCTTCAGCATAGGGAGAAGGAGATGCTCAAG
AAAGCTATAGCTTAGTGAATTTTGTTTTGGGACATGTCTCATATCTAGATTTGCTTTCTG
TATGACGCCAGGTTTTTCTTGCTGCACTGTGGCAAGCGCTGGCTTAACTAGATTTCATTG
GTTTGGCAGATAAAATTTAAGAAAAATTCGTCTCTGTGGCACCTGTTCTGTAATCTTTCC
ATCTTGCTATCCATATCTGGGATGCTGAACGTTATCAGTTATCACTGAAAGCAATGGTAT
TCTTCATATTTATCACT