Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0194400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4906251:4908791:1 gene:Os03g0194400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acetyltransferase, GNAT family protein, expressed. (Os03t0194400-01)
Sequence

ATGGAGTCGTCGTCGTCGGCGGCGGCGGCCGTCGACGGAGAGGACGGAGGGGGCAGCAAG
CGCAGCTGGTACGCGGTGGGGGAGCGGGCGGTGCTGGTGCCGTACCTGCGGGAGCACGTG
CCGCGGTACCACGGGTGGATGAAGGATCCGGCGCTTCTGGAGGCCACCGCGTCGGAGCCC
CTCTCCCTCGACCAGGAGTTCGACGTCCACCGCTCCTGGACCCTCGACCCGCTCAAGCAT
ACGTTCATAGTGCTGGACAAGGACCTGATCGAGGGAGGGTTCGCGGTTGGCGATCCACAC
ACTGAAGCGATGGTTGGTGATGTAAACATCTATATGAATGATCCTGATGATTTGCAACTT
GCAGAGATAGAGATTATGATTGCTGAACACAAGAGTACCTTTTGTTACAGCCGCGGAAAG
GGACTTGGTCAAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATGGAATT
CACACTTTCAGAGCAAAAATTAACGAATCAAATACAGCATCCTTAAAGCTGTTCAGAAAA
TTGGGCTTCAAGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGGCACCC
GCAACTGCACTACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGA

Peptide Sequence

PEP ID

Os03t0194400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4906251:4908791:1 gene:Os03g0194400 transcript:Os03t0194400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acetyltransferase, GNAT family protein, expressed. (Os03t0194400-01)
Sequence

MESSSSAAAAVDGEDGGGSKRSWYAVGERAVLVPYLREHVPRYHGWMKDPALLEATASEP
LSLDQEFDVHRSWTLDPLKHTFIVLDKDLIEGGFAVGDPHTEAMVGDVNIYMNDPDDLQL
AEIEIMIAEHKSTFCYSRGKGLGQEAILIMMAFAVEKYGIHTFRAKINESNTASLKLFRK
LGFKDASYSSVFKEVTLEAPATALPLVSPLTIGNW

Transcript Sequence

Transcript ID

Os03t0194400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4906251:4908791:1 gene:Os03g0194400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acetyltransferase, GNAT family protein, expressed. (Os03t0194400-01)
Sequence

CCGCAGCCCACGGTTTCGTGACCGTGGACGGGGGCCCAATTGGAAACCCTTCGATGGAGT
CGTCGTCGTCGGCGGCGGCGGCCGTCGACGGAGAGGACGGAGGGGGCAGCAAGCGCAGCT
GGTACGCGGTGGGGGAGCGGGCGGTGCTGGTGCCGTACCTGCGGGAGCACGTGCCGCGGT
ACCACGGGTGGATGAAGGATCCGGCGCTTCTGGAGGCCACCGCGTCGGAGCCCCTCTCCC
TCGACCAGGAGTTCGACGTCCACCGCTCCTGGACCCTCGACCCGCTCAAGCATACGTTCA
TAGTGCTGGACAAGGACCTGATCGAGGGAGGGTTCGCGGTTGGCGATCCACACACTGAAG
CGATGGTTGGTGATGTAAACATCTATATGAATGATCCTGATGATTTGCAACTTGCAGAGA
TAGAGATTATGATTGCTGAACACAAGAGTACCTTTTGTTACAGCCGCGGAAAGGGACTTG
GTCAAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATGGAATTCACACTT
TCAGAGCAAAAATTAACGAATCAAATACAGCATCCTTAAAGCTGTTCAGAAAATTGGGCT
TCAAGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGGCACCCGCAACTG
CACTACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAA
ATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTTCCAT
GCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACTTGTG
TAGGCTTCTCGACTGCAACGTGATGCTGAACGGTTTGAACTTTTGATGGTGTGATGTTGT
ATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAGATTTTCAACCACAAGGTGTGGAA
CAGGTTGCAGTAATCTCTAGAAAGTTTATGAAGGCGATGCATTGCTCACACTGTATACAT
ATACATCGTTATCATGCATGGCACGAGAACACTTTTCAGTTAGCCAGAAATTTGTGTGCA
TTCGATTCGAGATCTGTAACTTGTACTGGTAGTAACTTGTAAGCCAGAAATGCCTACAGA
TAGC