Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0193000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:4847241:4853828:1 gene:Os03g0193000 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRAS transcription factor domain containing protein. (Os03t0193000-01)
Sequence	ATGTCAATGCAGGCCTCTAACCGACCATACAGATATCCAGACAATTCTCAAATACCATAC TACAGCCGGAGTTCAATGCATGTGGGGCAAAATGGTACTTACCATGTGCAACAAAATCAT GAGGATCTTTACGCGTCATCTGATGATGGTTCACAGAACGGCAATTCTAAGGCTCAGGGG TTGCAAGCACAGTACTGCACTCTAGATTCATCCTCAGGCAATTTTGTGTATCCAGCACAT AGCTCTACATCCTCCCACATAAGTGGGAGCCCCATTTCTCAGCAAGATAGCCACTCAGAG CACACATCTGGTTCCCCTGCAAGTGCTTCATGTGTTACTGAAGTTCCAGGCTTGAGGTTT ACAACAATTGAGGAGATAGAGAATGCAATGTTTGGACCTGAACCTGACACAGTTAGCTCG GACTGCTCCTTACTTACTGATTCTGCTTTTTACCAAGATAACTGGAGGGAGCATCTGGGA ATCAATACAGGGGACTTGAAGCAGGTAATTGCAGCATGCGGTAAGGCTGTTGATGAGAAT AGTTGGTATAGGGACTTGCTGATATCTGAGTTAAGGAACATGGTTTCCATTTCTGGAGAG CCGATGCAACGCCTTGGAGCCTATATGTTGGAAGGCCTTGTTGCCAGGCTTTCTTCGACT GGGCATGCCTTATATAAATCCCTGAAGTGTAAAGAACCTACTAGCTTCGAGCTCATGTCT TATATGCATCTCCTCTATGAGATATGCCCGTTTTTCAAGTTTGGTTACATGTCTGCCAAT GGAGCAATTGCAGAGGCTGTTAAGGGCGAGAACTTTGTTCACATCATCGACTTCCAAATT GCTCAAGGTAGCCAGTGGGCAACTATGATACAGGCCCTTGCTGCAAGGCCTGGGGGACCA CCATACCTGAGGATTACTGGTATAGATGACTCGAATTCTGCCCATGCCCGAGGTGGTGGA CTGGATATAGTCGGACGGCGGTTATTCAATATTGCCCAGTCATGTGGTCTGCCCTTTGAG TTCAATGCTGTCCCAGCAGCTAGTCATGAGGTTATGCTTGAACATCTTGATATAAGATCT GGGGAGGTTATTGTTGTTAATTTTGCCTACCAGCTGCATCACACTCCTGATGAGAGTGTG GGCATAGAAAATCACCGGGACAGGATATTGAGAATGGTCAAGGGGCTCTCTCCAAGGGTG GTAACTCTTGTAGAACAGGAAGCAAACACAAACACTGCACCTTTCTTCAATAGATACTTG GAAACTCTTGATTATTACACAGCTATGTTTGAAGCTATAGATGTTGCTTGCCCAAGGGAT GACAAGAAGCGGATTAGCACTGAGCAACACTGTGTTGCAAGAGATATTGTTAATTTGATT GCATGTGAAGGTGCAGAAAGGGTGGAGAGGCACGAGCCTTTTGGAAAATGGAGGGCAAGG CTTTCAATGGCTGGCTTTAGGCCGTACCCACTAAGTGCACTGGTGAACAACACTATCAAA AAGTTGCTGGATAGTTACCACAGTTACTACAAGCTAGAGGAGAGAGATGGTGCCCTTTAT CTTGGATGGAAGAACAGAAAGCTGGTTGTATCTTCTGCATGGCGGTGA

Peptide Sequence

PEP ID	Os03t0193000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:4847241:4853828:1 gene:Os03g0193000 transcript:Os03t0193000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRAS transcription factor domain containing protein. (Os03t0193000-01)
Sequence	MSMQASNRPYRYPDNSQIPYYSRSSMHVGQNGTYHVQQNHEDLYASSDDGSQNGNSKAQG LQAQYCTLDSSSGNFVYPAHSSTSSHISGSPISQQDSHSEHTSGSPASASCVTEVPGLRF TTIEEIENAMFGPEPDTVSSDCSLLTDSAFYQDNWREHLGINTGDLKQVIAACGKAVDEN SWYRDLLISELRNMVSISGEPMQRLGAYMLEGLVARLSSTGHALYKSLKCKEPTSFELMS YMHLLYEICPFFKFGYMSANGAIAEAVKGENFVHIIDFQIAQGSQWATMIQALAARPGGP PYLRITGIDDSNSAHARGGGLDIVGRRLFNIAQSCGLPFEFNAVPAASHEVMLEHLDIRS GEVIVVNFAYQLHHTPDESVGIENHRDRILRMVKGLSPRVVTLVEQEANTNTAPFFNRYL ETLDYYTAMFEAIDVACPRDDKKRISTEQHCVARDIVNLIACEGAERVERHEPFGKWRAR LSMAGFRPYPLSALVNNTIKKLLDSYHSYYKLEERDGALYLGWKNRKLVVSSAWR

Transcript Sequence

Transcript ID	Os03t0193000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:4847241:4853828:1 gene:Os03g0193000 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRAS transcription factor domain containing protein. (Os03t0193000-01)
Sequence	GTTTATGCTTAATTTGCTTCCATTTTGTTTATTACTCCTACAAGAAATTGATGAGGGGGT TCGCTTGCCGTTGCAGCACACCACATCCCCCTCATCCACCTGTCCGTGATGATACTCCCA TAGTTGAGACTTGAGATTGCCCTTCTCCTCAATCTTGTTGATCTCTTCTCCCACCTCGCG CCTTCGAGCTAGTCGTGTTTAGGTTTAGCCCCATTAATCTTGGTAAGGGTGGTAGTGGTT GTTGCTGTTGTTGTTGTTGTTGCCCTGAAGCTTTCTTCCTCAAGGACCAGAATTTGTCTT CAGCTGCTAAAGGAGGGCCTACCACTAAAGATTTGTGATCAATCCCACTTTGATCTATTA CCATTGTGGCGCTGAATATTCAGTGATAACAACGGCAAGATCAACTCCCTATTAATTGTT CGGAAGTGCATCATTCCTCAGCGACTCCAGCATATAAATAAAATCCAGAAGGTTGCACCA GAGAATATGTCAATGCAGGCCTCTAACCGACCATACAGATATCCAGACAATTCTCAAATA CCATACTACAGCCGGAGTTCAATGCATGTGGGGCAAAATGGTACTTACCATGTGCAACAA AATCATGAGGATCTTTACGCGTCATCTGATGATGGTTCACAGAACGGCAATTCTAAGGCT CAGGGGTTGCAAGCACAGTACTGCACTCTAGATTCATCCTCAGGCAATTTTGTGTATCCA GCACATAGCTCTACATCCTCCCACATAAGTGGGAGCCCCATTTCTCAGCAAGATAGCCAC TCAGAGCACACATCTGGTTCCCCTGCAAGTGCTTCATGTGTTACTGAAGTTCCAGGCTTG AGGTTTACAACAATTGAGGAGATAGAGAATGCAATGTTTGGACCTGAACCTGACACAGTT AGCTCGGACTGCTCCTTACTTACTGATTCTGCTTTTTACCAAGATAACTGGAGGGAGCAT CTGGGAATCAATACAGGGGACTTGAAGCAGGTAATTGCAGCATGCGGTAAGGCTGTTGAT GAGAATAGTTGGTATAGGGACTTGCTGATATCTGAGTTAAGGAACATGGTTTCCATTTCT GGAGAGCCGATGCAACGCCTTGGAGCCTATATGTTGGAAGGCCTTGTTGCCAGGCTTTCT TCGACTGGGCATGCCTTATATAAATCCCTGAAGTGTAAAGAACCTACTAGCTTCGAGCTC ATGTCTTATATGCATCTCCTCTATGAGATATGCCCGTTTTTCAAGTTTGGTTACATGTCT GCCAATGGAGCAATTGCAGAGGCTGTTAAGGGCGAGAACTTTGTTCACATCATCGACTTC CAAATTGCTCAAGGTAGCCAGTGGGCAACTATGATACAGGCCCTTGCTGCAAGGCCTGGG GGACCACCATACCTGAGGATTACTGGTATAGATGACTCGAATTCTGCCCATGCCCGAGGT GGTGGACTGGATATAGTCGGACGGCGGTTATTCAATATTGCCCAGTCATGTGGTCTGCCC TTTGAGTTCAATGCTGTCCCAGCAGCTAGTCATGAGGTTATGCTTGAACATCTTGATATA AGATCTGGGGAGGTTATTGTTGTTAATTTTGCCTACCAGCTGCATCACACTCCTGATGAG AGTGTGGGCATAGAAAATCACCGGGACAGGATATTGAGAATGGTCAAGGGGCTCTCTCCA AGGGTGGTAACTCTTGTAGAACAGGAAGCAAACACAAACACTGCACCTTTCTTCAATAGA TACTTGGAAACTCTTGATTATTACACAGCTATGTTTGAAGCTATAGATGTTGCTTGCCCA AGGGATGACAAGAAGCGGATTAGCACTGAGCAACACTGTGTTGCAAGAGATATTGTTAAT TTGATTGCATGTGAAGGTGCAGAAAGGGTGGAGAGGCACGAGCCTTTTGGAAAATGGAGG GCAAGGCTTTCAATGGCTGGCTTTAGGCCGTACCCACTAAGTGCACTGGTGAACAACACT ATCAAAAAGTTGCTGGATAGTTACCACAGTTACTACAAGCTAGAGGAGAGAGATGGTGCC CTTTATCTTGGATGGAAGAACAGAAAGCTGGTTGTATCTTCTGCATGGCGGTGACATCTC CGTGTTAATTTGGAAGAAGCTTCTTTAGGTTCTTTCGTGGCTTCTTGGTGGACGCATGAA TCCAAGGTGGAACCTGATCTTCATAGAGCAGAGAGAACTCCATAGTCCAGAACAATGTGG TCGCTTGCTTGTTGGCACCCATCTCTAAACCCTCGTATGCTTACCATCCGTCAGATTTAA TCGCCATAGGCAGAATACTCTTCCTGACTTCCCATAGTCCAGTCCAGTCGCAATATAGGT GTACACTGTACTGTTTTACCTGCTCATGGTAGAATGTCCGTTTTATGTCGATCAGTCAAG TAGAGTCTGGTCACCAGAATCCCCGTCTTAATAGAACGTCTGTTTTAAAAGTCAGTCAAG AAGAGAGTCTGGTCACCAGAGTCCGTTTCTTGATCCTGCTCGTTGTACAATACAATGACG TCTCAATGTGAATTCTGGATCCTATGCTACTACAATGATGATATGCCTCACTGAATTCTG G