Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0192700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4825697:4829533:-1 gene:Os03g0192700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INOSITOL 1-PHOSPHATE SYNTHASE-1 description:Similar to Myo-inositol-1-phosphate synthase. (Os03t0192700-01)
Sequence

ATGTTCATCGAGAGCTTCCGCGTGGAGAGCCCGCACGTGCGGTACGGCGCGGCGGAGATC
GAGTCGGACTACCAGTACGACACGACGGAGCTGGTGCACGAGAGCCACGACGGCGCCTCC
CGCTGGATCGTCCGCCCCAAGTCCGTCCGCTACAACTTCCGGACCACCACCACCGTCCCC
AAGCTCGGGGTGATGCTCGTGGGGTGGGGCGGCAACAACGGCTCAACGCTGACGGCTGGG
GTCATCGCCAACAGGGAGGGAATCTCATGGGCGACCAAGGACAAGGTGCAGCAAGCCAAC
TACTATGGCTCACTCACCCAGGCGTCCACCATCAGGGTCGGGAGCTACAACGGGGAGGAG
ATCTACGCGCCCTTCAAGAGCCTCCTGCCCATGGTGAACCCTGATGACCTTGTGTTCGGG
GGCTGGGACATTAGCAACATGAACCTGGCTGATGCTATGACCAGGGCAAAGGTACTTGAC
ATTGATCTGCAGAAGCAGCTCAGACCTTACATGGAGTCCATGGTGCCTCTCCCCGGCATC
TATGACCCCGACTTCATCGCCGCCAACCAGGGATCCCGCGCGAACAATGTCATCAAGGGC
ACCAAGAAGGAGCAGATGGAGCAGATCATCAAGGACATCAGGGAGTTCAAGGAAAAGAGC
AAAGTGGACAAGGTGGTGGTGTTGTGGACTGCAAACACTGAAAGGTACAGCAATGTCTGT
GTTGGGCTCAATGACACAATGGAGAACCTCCTGGCGTCTGTGGACAAGAACGAGGCGGAG
ATATCACCATCGACACTGTATGCCATTGCCTGCGTCATGGAGGGTATACCGTTCATTAAC
GGGAGTCCTCAGAACACCTTTGTGCCTGGGCTGATCGATCTTGCTATTAAGAACAACTGC
CTGATTGGTGGTGATGATTTCAAGAGTGGACAGACAAAGATGAAGTCTGTCTTGGTTGAT
TTCCTAGTTGGTGCTGGAATAAAGCCCACCTCAATTGTCAGCTACAACCACTTGGGGAAT
AATGATGGCATGAACCTTTCCGCACCTCAAACATTCCGATCCAAGGAGATCTCCAAGAGC
AATGTGGTCGATGACATGGTCTCAAGCAATGCCATCCTCTATGAGCTTGGCGAGCATCCT
GATCATGTTGTTGTGATCAAGTATGTGCCGTATGTTGGAGACAGCAAGAGGGCAATGGAC
GAGTACACCTCAGAGATCTTCATGGGGGGTAAGAGCACCATCGTTCTGCACAACACCTGT
GAGGACTCACTCCTTGCCGCGCCGATCATTCTTGATCTGGTGCTCCTTGCCGAGCTCAGC
ACCAGGATTCAGCTGAAAGCCGAGGGGGAGGAGAAGTTCCATTCCTTCCATCCAGTGGCT
ACCATCCTGAGCTACCTCACCAAGGCACCCCTTGTTCCTCCTGGCACACCAGTGGTGAAC
GCCCTGGCAAAGCAGAGGGCAATGCTTGAGAACATCATGAGGGCCTGCGTTGGGCTGGCC
CCCGAGAACAACATGATCCTGGAGTACAAGTGA

Peptide Sequence

PEP ID

Os03t0192700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4825697:4829533:-1 gene:Os03g0192700 transcript:Os03t0192700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INOSITOL 1-PHOSPHATE SYNTHASE-1 description:Similar to Myo-inositol-1-phosphate synthase. (Os03t0192700-01)
Sequence

MFIESFRVESPHVRYGAAEIESDYQYDTTELVHESHDGASRWIVRPKSVRYNFRTTTTVP
KLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEE
IYAPFKSLLPMVNPDDLVFGGWDISNMNLADAMTRAKVLDIDLQKQLRPYMESMVPLPGI
YDPDFIAANQGSRANNVIKGTKKEQMEQIIKDIREFKEKSKVDKVVVLWTANTERYSNVC
VGLNDTMENLLASVDKNEAEISPSTLYAIACVMEGIPFINGSPQNTFVPGLIDLAIKNNC
LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKS
NVVDDMVSSNAILYELGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTC
EDSLLAAPIILDLVLLAELSTRIQLKAEGEEKFHSFHPVATILSYLTKAPLVPPGTPVVN
ALAKQRAMLENIMRACVGLAPENNMILEYK

Transcript Sequence

Transcript ID

Os03t0192700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4825697:4829533:-1 gene:Os03g0192700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INOSITOL 1-PHOSPHATE SYNTHASE-1 description:Similar to Myo-inositol-1-phosphate synthase. (Os03t0192700-01)
Sequence

CACAGCCTACCTAGCTTCTCCTTCTCGCTCGCTTCGCCCGCATAAGTCTAGCCACAAACC
CGCCGCCGCCGCCGCCGCCGCCGCCGCTAGCTTCCGCGGAGCGGGGCGAGATGTTCATCG
AGAGCTTCCGCGTGGAGAGCCCGCACGTGCGGTACGGCGCGGCGGAGATCGAGTCGGACT
ACCAGTACGACACGACGGAGCTGGTGCACGAGAGCCACGACGGCGCCTCCCGCTGGATCG
TCCGCCCCAAGTCCGTCCGCTACAACTTCCGGACCACCACCACCGTCCCCAAGCTCGGGG
TGATGCTCGTGGGGTGGGGCGGCAACAACGGCTCAACGCTGACGGCTGGGGTCATCGCCA
ACAGGGAGGGAATCTCATGGGCGACCAAGGACAAGGTGCAGCAAGCCAACTACTATGGCT
CACTCACCCAGGCGTCCACCATCAGGGTCGGGAGCTACAACGGGGAGGAGATCTACGCGC
CCTTCAAGAGCCTCCTGCCCATGGTGAACCCTGATGACCTTGTGTTCGGGGGCTGGGACA
TTAGCAACATGAACCTGGCTGATGCTATGACCAGGGCAAAGGTACTTGACATTGATCTGC
AGAAGCAGCTCAGACCTTACATGGAGTCCATGGTGCCTCTCCCCGGCATCTATGACCCCG
ACTTCATCGCCGCCAACCAGGGATCCCGCGCGAACAATGTCATCAAGGGCACCAAGAAGG
AGCAGATGGAGCAGATCATCAAGGACATCAGGGAGTTCAAGGAAAAGAGCAAAGTGGACA
AGGTGGTGGTGTTGTGGACTGCAAACACTGAAAGGTACAGCAATGTCTGTGTTGGGCTCA
ATGACACAATGGAGAACCTCCTGGCGTCTGTGGACAAGAACGAGGCGGAGATATCACCAT
CGACACTGTATGCCATTGCCTGCGTCATGGAGGGTATACCGTTCATTAACGGGAGTCCTC
AGAACACCTTTGTGCCTGGGCTGATCGATCTTGCTATTAAGAACAACTGCCTGATTGGTG
GTGATGATTTCAAGAGTGGACAGACAAAGATGAAGTCTGTCTTGGTTGATTTCCTAGTTG
GTGCTGGAATAAAGCCCACCTCAATTGTCAGCTACAACCACTTGGGGAATAATGATGGCA
TGAACCTTTCCGCACCTCAAACATTCCGATCCAAGGAGATCTCCAAGAGCAATGTGGTCG
ATGACATGGTCTCAAGCAATGCCATCCTCTATGAGCTTGGCGAGCATCCTGATCATGTTG
TTGTGATCAAGTATGTGCCGTATGTTGGAGACAGCAAGAGGGCAATGGACGAGTACACCT
CAGAGATCTTCATGGGGGGTAAGAGCACCATCGTTCTGCACAACACCTGTGAGGACTCAC
TCCTTGCCGCGCCGATCATTCTTGATCTGGTGCTCCTTGCCGAGCTCAGCACCAGGATTC
AGCTGAAAGCCGAGGGGGAGGAGAAGTTCCATTCCTTCCATCCAGTGGCTACCATCCTGA
GCTACCTCACCAAGGCACCCCTTGTTCCTCCTGGCACACCAGTGGTGAACGCCCTGGCAA
AGCAGAGGGCAATGCTTGAGAACATCATGAGGGCCTGCGTTGGGCTGGCCCCCGAGAACA
ACATGATCCTGGAGTACAAGTGAGGGAGGCTGCCGAGGCCGAGCAGCCGTGGCATGTGGC
AAAGAGGCGAATGGGATGGAGCAAGAAAGACGTGATTAGCTAGCTCTAAGAATTGTTTTA
GCTTCTCTTGTGATTTTTCGGTCTTTCCCATTCTTAACCTTCTGTGCTTTGTGTGAGACT
CTTATCGGGCTATGCAACTAGCAGCAGCCTTACTATGGTACTGGATGATGTTATGGAGAA
TGTTAGCTAGTTCCCCTCTATTTATAACTTATTAGTATCGGAGATTTCAGTTC