Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0192400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4808253:4810821:-1 gene:Os03g0192400 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRIM-19 family protein. (Os03t0192400-01)
Sequence

ATGACGGAGGCGTGGGTGCGGCACAAGCCCGGGATGGCGAGCGTCAAGGACATGCCGGTG
CTGCAGGACGGGCCGCCGCCGGGCGGCTTCGCGCCCGTGCGCTACGCGCGCCGGATCCCC
ACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGCGCCTTCGCCTGGGGG
ATGTACCAGGTTGGCCAGGGGAACAAGGTCCGCCGTGCACTCAAAGAGGAGAAAATTGCT
GCCCGCACCGCTTTAGTGCCAGTGCTCCAAGCTGAAGAAGATGAAAGATTTGTCAAAGAG
TGGACAAAGTCTCTTATGTGGGAGGAAATAATTATGAAAGATGTCCCTGGATGGAAGGTC
GGCCAAAGTGTCTATAATTCCGGGAAATGGATGCCTCCTGCCACCGGCGAGCTGCGTCGT
GAAGATTGA

Peptide Sequence

PEP ID

Os03t0192400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4808253:4810821:-1 gene:Os03g0192400 transcript:Os03t0192400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRIM-19 family protein. (Os03t0192400-01)
Sequence

MTEAWVRHKPGMASVKDMPVLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG
MYQVGQGNKVRRALKEEKIAARTALVPVLQAEEDERFVKEWTKSLMWEEIIMKDVPGWKV
GQSVYNSGKWMPPATGELRRED

Transcript Sequence

Transcript ID

Os03t0192400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4808253:4810821:-1 gene:Os03g0192400 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRIM-19 family protein. (Os03t0192400-01)
Sequence

GCATCGTCGTCTCGCCTTGCCCCGTCCACTAACCCTAGCGGCAACTGCGATCTCCAACCG
CTCGATCTCTCGCCGGAGGCTCCAGATCTGCGGGAGGTAGTCGACCTCGTCGCCGGCGGT
GGGGTTTCCGAATCGGGGGCGAAGATGACGGAGGCGTGGGTGCGGCACAAGCCCGGGATG
GCGAGCGTCAAGGACATGCCGGTGCTGCAGGACGGGCCGCCGCCGGGCGGCTTCGCGCCC
GTGCGCTACGCGCGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACT
ACCTTCGGCGCCTTCGCCTGGGGGATGTACCAGGTTGGCCAGGGGAACAAGGTCCGCCGT
GCACTCAAAGAGGAGAAAATTGCTGCCCGCACCGCTTTAGTGCCAGTGCTCCAAGCTGAA
GAAGATGAAAGATTTGTCAAAGAGTGGACAAAGTCTCTTATGTGGGAGGAAATAATTATG
AAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGGATGCCT
CCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCGCAGCCT
ACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGCTTTTGAACCAGAATACCCAAA
AAAAATTGCTACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTGTTGATGA
AATCTTGGCTAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTATGCTCTT
TTGTGGACGGAACATCTGTTTTGCCCTGATGTTCTCCCTTCTCTATGTTTTATTTTTTTC
TACTCTGTACTAAGCACTTCTTGGTCAGTGCTTTACCTTACTGTAAACATTCGAATGTAT
TCAGTCTTTTTAGACAAAGACACAGGAGG