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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0190000-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4694814:4695941:1 gene:Os03g0190000 gene_biotype:protein_coding transcript_biotype:protein_coding description:VQ domain containing protein. (Os03t0190000-01)
Sequence

ATGGTCATGGACAAGTCCAGCCTCCCGCCGCCGCCGCCGCCTCCCGCCTCTTCCGCTTCC
GCCGCCGCCGCCTCTTCCGCCCTCAAAGCCCTGAACAAGTCATCCTACAAGATCTCCAAG
CAGACCTCCTCGTCATCTCTGGCTTCGATGAAGGCATCCCAATCGCCACCGCCGCCGCCG
CCGCATCCTCGCCGCCCTTCTCCTCCTCCGCTCCCGCCGCCGCCGGCTCCTCCTTCGTCC
GCCCCCGCCGCGGTTGACCACCCGCCGCCGCAACCGCCTGTGTACAACATCGACAAGTCC
GACTTCCGGGACGTCGTCCAGAAGCTCACCGGCTCCCCCTGCCACCTCCTCCCGCCTCAG
GCTCAGCCGCCGGCCCCCGCCGCCGCCGTCTCCATGCTCCCTCCCCAGCCCCCGCCTCCT
ACCATCATGGCGCCTCCGCCCCCACCCCCGCCGTCGGCCATTCCGACCCGCCTCCACCGC
ATCCGGCCGCCGCCGCTGGCTCCGCCCCGCCCGCCGCCCATCCTGCAGCCGGCACCGCCC
GCGCTCTCTCCGCTTCCGCCGCTGCCGGCCGTCTGCATGACGGCGGAGTCCCCCATCTCG
GCCTACATGCGCCGCCTCCGCGGGATGCCGTCGCCGATCCACGTGCCCACCTCGCCGCTC
GGGTTCGGGTGCCTGCCCTCTCCACGGACGCCGCCATCGCCCGGTGTACCCATGCCGGCC
ACCAGCCCCCGCGTCCGCGACCCGTGA

Peptide Sequence

PEP ID

Os03t0190000-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4694814:4695941:1 gene:Os03g0190000 transcript:Os03t0190000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:VQ domain containing protein. (Os03t0190000-01)
Sequence

MVMDKSSLPPPPPPPASSASAAAASSALKALNKSSYKISKQTSSSSLASMKASQSPPPPP
PHPRRPSPPPLPPPPAPPSSAPAAVDHPPPQPPVYNIDKSDFRDVVQKLTGSPCHLLPPQ
AQPPAPAAAVSMLPPQPPPPTIMAPPPPPPPSAIPTRLHRIRPPPLAPPRPPPILQPAPP
ALSPLPPLPAVCMTAESPISAYMRRLRGMPSPIHVPTSPLGFGCLPSPRTPPSPGVPMPA
TSPRVRDP

Transcript Sequence

Transcript ID

Os03t0190000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4694814:4695941:1 gene:Os03g0190000 gene_biotype:protein_coding transcript_biotype:protein_coding description:VQ domain containing protein. (Os03t0190000-01)
Sequence

AAATCCCAATCCCCACTCCCACCTCACTCCCCCCCTCTCTTCGCCTCCCTCTCTCTCTCC
TCCGCCATGGTCATGGACAAGTCCAGCCTCCCGCCGCCGCCGCCGCCTCCCGCCTCTTCC
GCTTCCGCCGCCGCCGCCTCTTCCGCCCTCAAAGCCCTGAACAAGTCATCCTACAAGATC
TCCAAGCAGACCTCCTCGTCATCTCTGGCTTCGATGAAGGCATCCCAATCGCCACCGCCG
CCGCCGCCGCATCCTCGCCGCCCTTCTCCTCCTCCGCTCCCGCCGCCGCCGGCTCCTCCT
TCGTCCGCCCCCGCCGCGGTTGACCACCCGCCGCCGCAACCGCCTGTGTACAACATCGAC
AAGTCCGACTTCCGGGACGTCGTCCAGAAGCTCACCGGCTCCCCCTGCCACCTCCTCCCG
CCTCAGGCTCAGCCGCCGGCCCCCGCCGCCGCCGTCTCCATGCTCCCTCCCCAGCCCCCG
CCTCCTACCATCATGGCGCCTCCGCCCCCACCCCCGCCGTCGGCCATTCCGACCCGCCTC
CACCGCATCCGGCCGCCGCCGCTGGCTCCGCCCCGCCCGCCGCCCATCCTGCAGCCGGCA
CCGCCCGCGCTCTCTCCGCTTCCGCCGCTGCCGGCCGTCTGCATGACGGCGGAGTCCCCC
ATCTCGGCCTACATGCGCCGCCTCCGCGGGATGCCGTCGCCGATCCACGTGCCCACCTCG
CCGCTCGGGTTCGGGTGCCTGCCCTCTCCACGGACGCCGCCATCGCCCGGTGTACCCATG
CCGGCCACCAGCCCCCGCGTCCGCGACCCGTGACCGAGAACCAGCCATGGGTGCTCCTGC
TGCTGCTGCTGCTGCTTCCAATGTGTAGATATGGCCGGTGTAGGAGAGATCTGGCGAGGC
GGCGGCGACGACGAAAGGAGGAAGGAGCAATACAATTACAATGTGTTAGCTTCACCTTAA
AATCTTAGCTCAATTTTTTTTAGCATGTTCTACCTACCTTATAATATTTTGTTGGTGTAT
ATGGCGATGAATTGATCATGTTTGGCTAATTTTGTAACAAGCTTATGCAATATGTAGTAG
CAAAACTCAAATCTTTATATGCAAAATTTATTTAGAAGAATTTCATGG