Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0189300-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:4665457:4666919:-1 gene:Os03g0189300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0189300-01);Conserved hypothetical protein. (Os03t0189300-02)
Sequence

ATGCCTCGAAGTTTAGCCCATCCCCGATCGCCGCACCATCATGGTCCAAGAATTCTTGCT
CATATCGCCGTGCAACGTCTGAAGAGGTGTTCAATCCGGACGAACAAGATGCAGCAGAGC
CGGCAGGACGTGGACGAGCATGTCGCCGAGCTCCGCGGCGAGCTGCGCAAGGCGCGCGAG
GAGCGAGACCGCGCGTACCGCGTCCTGGAGGTGAGCGAGTGGAAGGCGCTGGCGTCGGCC
AACGACCGCACCACCATAGAGACGCTCGAGGCGGAGCTCGACGCGTCCAGGGAGTCCGAG
AAGCGGATGCTCGAGTCCCTGGCGATGCAGACGAAGCAGCTCGAGATGACCAAGATCGAG
CTCGAGGAGGCCAGGCTGGAGAACGCGTCGCTGCGTGAGACCATCCAGAGGCTCGAGGCC
ATAGCGGTGCCCGTCGCGACGACGCCGAGAGGAAGGTACGATCGCGACTACCAGAGGGTT
CACGGCGAGCTGCGGATGGCGCTGGTGGCGGAGGACAAGAACAAGAAGGCGATGGAGGAG
CTGGTGCTGGCACTCAAGGAGGTGAACGGGGAGCTGCACACGACGCGGCAGCTGCTGGCG
CGGTCGCAGCACGAGGCCGAGACGGCGCGGCTGGAGTCGGACCGGCTGCACGTCTCGCTC
AAGCGCAAGGACGACAAGCTCCGCGCGCTGTCGGAGGAGGTGGCCAGGCTGCGCGCCGAC
GCCGAGGAGTCGTTCGCGGCGTGGCGGGGCAAGGAGGCCGGGTTCACGTCGTGCATGAAG
TCCACCGAGTCCGAGCTCGCCGAGACGCGGCGCGAGAACGCGCGCCTCCTGGAGTCGCAG
CGGTCCGGGCGGGACGAGATCGCCAAGCTGCGCGACATCCTGAGGCAGGCCGTCAAGGAC
ACCAAGGTCGTGAAGGAGGCGCTGGAGGAGGCGAGGGGCGAGAACGCCGCGCTCAAGGAG
ATGCTCGGCGACAAGGACACCGCCATCAAGTGCACCAAGCAGGAGCTCGAGTGCCTCCGG
GTGACGGAGGCGGCGGCGCGCGACAGCGTCAAGGAGCTGCAGAGCCTGCTCGTCGCCACG
TCGTCGAGCCCCACGGCCGCCGGCATGAAGCTATCCGCGTCGCCGAGCCCCACAGCTTCC
GGGATAAAGCTGGACATGGAGGATTCCTCGTCGTCGCACGGGTCGAGAGAACTGCACGGG
CTGATCAAGTGCCACTCGGAGGCGAGGGTGAAGCCGCCGGCGGGGCTCACCCTACCGCGG
CGGAGGTCGGATAACTTCGAAGGATCGGTGTACGACATATTCGGGTCGATGGAAGATCAG
AAGAGCGAGCTAAGCGCGTTCTCGACAATGCCGAGGTCGTTGCCCGCACGGCGGCGGGTG
ATGATGCGCAAGGTTGGCAGCTTGTTCCGGTTTAAGAGCTTCAGTATCAAGTAG

Peptide Sequence

PEP ID

Os03t0189300-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:4665457:4666919:-1 gene:Os03g0189300 transcript:Os03t0189300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0189300-01);Conserved hypothetical protein. (Os03t0189300-02)
Sequence

MPRSLAHPRSPHHHGPRILAHIAVQRLKRCSIRTNKMQQSRQDVDEHVAELRGELRKARE
ERDRAYRVLEVSEWKALASANDRTTIETLEAELDASRESEKRMLESLAMQTKQLEMTKIE
LEEARLENASLRETIQRLEAIAVPVATTPRGRYDRDYQRVHGELRMALVAEDKNKKAMEE
LVLALKEVNGELHTTRQLLARSQHEAETARLESDRLHVSLKRKDDKLRALSEEVARLRAD
AEESFAAWRGKEAGFTSCMKSTESELAETRRENARLLESQRSGRDEIAKLRDILRQAVKD
TKVVKEALEEARGENAALKEMLGDKDTAIKCTKQELECLRVTEAAARDSVKELQSLLVAT
SSSPTAAGMKLSASPSPTASGIKLDMEDSSSSHGSRELHGLIKCHSEARVKPPAGLTLPR
RRSDNFEGSVYDIFGSMEDQKSELSAFSTMPRSLPARRRVMMRKVGSLFRFKSFSIK

Transcript Sequence

Transcript ID

Os03t0189300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4665457:4666919:-1 gene:Os03g0189300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0189300-01);Conserved hypothetical protein. (Os03t0189300-02)
Sequence

ACATGCCTCGAAGTTTAGCCCATCCCCGATCGCCGCACCATCATGGTCCAAGAATTCTTG
CTCATATCGCCGTGCAACGTCTGAAGAGGTGTTCAATCCGGACGAACAAGATGCAGCAGA
GCCGGCAGGACGTGGACGAGCATGTCGCCGAGCTCCGCGGCGAGCTGCGCAAGGCGCGCG
AGGAGCGAGACCGCGCGTACCGCGTCCTGGAGGTGAGCGAGTGGAAGGCGCTGGCGTCGG
CCAACGACCGCACCACCATAGAGACGCTCGAGGCGGAGCTCGACGCGTCCAGGGAGTCCG
AGAAGCGGATGCTCGAGTCCCTGGCGATGCAGACGAAGCAGCTCGAGATGACCAAGATCG
AGCTCGAGGAGGCCAGGCTGGAGAACGCGTCGCTGCGTGAGACCATCCAGAGGCTCGAGG
CCATAGCGGTGCCCGTCGCGACGACGCCGAGAGGAAGGTACGATCGCGACTACCAGAGGG
TTCACGGCGAGCTGCGGATGGCGCTGGTGGCGGAGGACAAGAACAAGAAGGCGATGGAGG
AGCTGGTGCTGGCACTCAAGGAGGTGAACGGGGAGCTGCACACGACGCGGCAGCTGCTGG
CGCGGTCGCAGCACGAGGCCGAGACGGCGCGGCTGGAGTCGGACCGGCTGCACGTCTCGC
TCAAGCGCAAGGACGACAAGCTCCGCGCGCTGTCGGAGGAGGTGGCCAGGCTGCGCGCCG
ACGCCGAGGAGTCGTTCGCGGCGTGGCGGGGCAAGGAGGCCGGGTTCACGTCGTGCATGA
AGTCCACCGAGTCCGAGCTCGCCGAGACGCGGCGCGAGAACGCGCGCCTCCTGGAGTCGC
AGCGGTCCGGGCGGGACGAGATCGCCAAGCTGCGCGACATCCTGAGGCAGGCCGTCAAGG
ACACCAAGGTCGTGAAGGAGGCGCTGGAGGAGGCGAGGGGCGAGAACGCCGCGCTCAAGG
AGATGCTCGGCGACAAGGACACCGCCATCAAGTGCACCAAGCAGGAGCTCGAGTGCCTCC
GGGTGACGGAGGCGGCGGCGCGCGACAGCGTCAAGGAGCTGCAGAGCCTGCTCGTCGCCA
CGTCGTCGAGCCCCACGGCCGCCGGCATGAAGCTATCCGCGTCGCCGAGCCCCACAGCTT
CCGGGATAAAGCTGGACATGGAGGATTCCTCGTCGTCGCACGGGTCGAGAGAACTGCACG
GGCTGATCAAGTGCCACTCGGAGGCGAGGGTGAAGCCGCCGGCGGGGCTCACCCTACCGC
GGCGGAGGTCGGATAACTTCGAAGGATCGGTGTACGACATATTCGGGTCGATGGAAGATC
AGAAGAGCGAGCTAAGCGCGTTCTCGACAATGCCGAGGTCGTTGCCCGCACGGCGGCGGG
TGATGATGCGCAAGGTTGGCAGCTTGTTCCGGTTTAAGAGCTTCAGTATCAAGTAGTAGC
TGCTACTGCCGAGATTCGGGGCC