Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0189100-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4660862:4661923:1 gene:Os03g0189100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0503 domain containing protein. (Os03t0189100-01)
Sequence

ATGCGGCGATCGGAGTGGGAGGACCGGTGGTGCAAGCGGCACCCGGAGCACCGGCTGTCC
AAGGGCGTGTGCCCCTACTGCCTCCGCGACCGCCTCGCCCACCTCTCCGCCTCCTCCTCG
GCCACCACCACGACGCGCGCCTCCTCCTCCGCCGAATCCAGCGGCTACTCCTCCGGCTCG
CCTCCCTGCTACGGGGCCCTCTCGGCCGACGTCAGCTCCGTACACGTGGTCGGCGCCGCC
GGCTCGTCCTTCGCCAACGTCGCCGCCTTCTCGCAGCCGCTGATGCCGAGCTCGGTTAGT
CGGAAACCAGCCGGAGGGGGGCAAGAAGAGCCGGGAAGGGAGGCATCTGGTAAGGGGAAG
CAGCAGGAGGTGAAGAGGAAGAAGAGCGGGAAGAAGAAGAAGATTGGGAGGTTCCTGTCG
AGGCTCGTCGGAGCGGAGAAGCGGCGGCAATCAGGGGACGCCGATGGCGGCGATCTCTTC
CATTCCAAGACCATGAAGGAGAAGACGGCGCACAAGTGGGTATTTTTCTGA

Peptide Sequence

PEP ID

Os03t0189100-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4660862:4661923:1 gene:Os03g0189100 transcript:Os03t0189100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0503 domain containing protein. (Os03t0189100-01)
Sequence

MRRSEWEDRWCKRHPEHRLSKGVCPYCLRDRLAHLSASSSATTTTRASSSAESSGYSSGS
PPCYGALSADVSSVHVVGAAGSSFANVAAFSQPLMPSSVSRKPAGGGQEEPGREASGKGK
QQEVKRKKSGKKKKIGRFLSRLVGAEKRRQSGDADGGDLFHSKTMKEKTAHKWVFF

Transcript Sequence

Transcript ID

Os03t0189100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4660862:4661923:1 gene:Os03g0189100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0503 domain containing protein. (Os03t0189100-01)
Sequence

ATCTCCTCCTACCCGCCCTGCTCCCGTGCTGCCACCAACAACGCGATCACCAGTTCACCA
CCACCGCCACGCGCGCGCTGTCTCCAAACACAGACGCATAAACCCTAGCAAGCCAACACG
GAGGAAGAGCGATCGATCGAGCAGCGGAGAAAGCTTCGCCTCGCCACCATGCGGCGATCG
GAGTGGGAGGACCGGTGGTGCAAGCGGCACCCGGAGCACCGGCTGTCCAAGGGCGTGTGC
CCCTACTGCCTCCGCGACCGCCTCGCCCACCTCTCCGCCTCCTCCTCGGCCACCACCACG
ACGCGCGCCTCCTCCTCCGCCGAATCCAGCGGCTACTCCTCCGGCTCGCCTCCCTGCTAC
GGGGCCCTCTCGGCCGACGTCAGCTCCGTACACGTGGTCGGCGCCGCCGGCTCGTCCTTC
GCCAACGTCGCCGCCTTCTCGCAGCCGCTGATGCCGAGCTCGGTTAGTCGGAAACCAGCC
GGAGGGGGGCAAGAAGAGCCGGGAAGGGAGGCATCTGGTAAGGGGAAGCAGCAGGAGGTG
AAGAGGAAGAAGAGCGGGAAGAAGAAGAAGATTGGGAGGTTCCTGTCGAGGCTCGTCGGA
GCGGAGAAGCGGCGGCAATCAGGGGACGCCGATGGCGGCGATCTCTTCCATTCCAAGACC
ATGAAGGAGAAGACGGCGCACAAGTGGGTATTTTTCTGATCAAACGTTGCCGCCACCGCA
TGCAAACTATGGATCGTAAATTCCATGCTTGGTTGTTATTCTTGCCTACCTTTTTTTTTA
AAATTTTTAGGGGGCTTTCACTCTAAACTATTCTCAAGTATTTTTGTGTTTGATTTTGAC
TTTTTTTTTAAAAAAAAACAAGAAGAATTTTGGGATCCTGTATGTATACGAGCAGAAGTT
TATAATTATTAACCTGTCAATGATTTGTACTTGACCACAACGGGGGATTGCAAATCGTTA
CTCTGTAAAGCTAGAAAAATATAAGGAGACAGTGTATACGGGTGTAAAATTAGGCATCTG
TACAGTATCTTGTATAGTTTCAATTATAAGTTTCATTTCTCG