Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0188900-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:4653461:4654743:1 gene:Os03g0188900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 13 description:Similar to HAHB-7 (Fragment). (Os03t0188900-01);Similar to cDNA clone:001-200-F05, full insert sequence. (Os03t0188900-02)
Sequence	GGAGAGGACCTGGCGTTCTCTGAGGAGGGCAGCTTGCCCGCGGTGACCATGGAGCAGAAA GATGAAGCCGAGATGGAGGAGGTGGACGAGGAGGAGGAGGAGGAGGTCGACGAAGACATG GCCGGCGGGCACGCGGCGCAGTCGCCGTCGCCGTCGTGCGGGCTGGGCGAGAAGAAGCGG CGGCTGGCGCTGGAGCAGGTGCGCGCTCTGGAGCGGAGCTTCGACACGGACAACAAGCTG GACCCGGACCGCAAGGCCCGCATCGCGCGCGACCTCGGCCTGCAGCCGCGCCAGGTCGCC GTCTGGTTCCAGAACCGCCGCGCCCGGTGGAAGACGAAGCAGCTCGAGCGCGACTTCGCC GCCCTCCGCGCCCGCCACGACGCCCTCCGCGCCGACTGCGACGCCCTGCGCCGCGACAAG GACGCCCTCGCCGCCGAGATTCGGGAGCTGAGGGAGAAGCTGCCCACCAAGCCGGCGGAC ACGGCGGCATCGGTGAAGGTAGAAGCCGGCAATGACGCGGCGGCCGGCGCCGCGGCCGCC ACGGTGTGCAAGGACGGCTCGTCGGACGACAGCGACTCCAGCGTGGTGTTCAACGACGAG GCGTCGCCGTACTCCGGCGCGGCCTTCATTGGATTCGGCCCGTCGTTCTTGGTCGACGAC GCGTCGGCGGCAACCGTGGGCTGCTCGTCGTCGCTCCCCGCGCTCGAGTCCAAATGGCAC GGTCCGTACTCCGACGACTCGTGCAAAGGCGGCGTCTATGGCTTCACGGAGGAATGGCTC GCTGCCTGCTCCGGCGAGATGGCCGGCAACGACGCCGCCGGCTTCTTCTCCGACGAGCAC GCCTCCAACCTCAACTTCGGTTGGTGCGCGAGTGGTAACGAGGGTTGGGAATGA

Peptide Sequence

PEP ID	Os03t0188900-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:4653461:4654743:1 gene:Os03g0188900 transcript:Os03t0188900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 13 description:Similar to HAHB-7 (Fragment). (Os03t0188900-01);Similar to cDNA clone:001-200-F05, full insert sequence. (Os03t0188900-02)
Sequence	GEDLAFSEEGSLPAVTMEQKDEAEMEEVDEEEEEEVDEDMAGGHAAQSPSPSCGLGEKKR RLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFA ALRARHDALRADCDALRRDKDALAAEIRELREKLPTKPADTAASVKVEAGNDAAAGAAAA TVCKDGSSDDSDSSVVFNDEASPYSGAAFIGFGPSFLVDDASAATVGCSSSLPALESKWH GPYSDDSCKGGVYGFTEEWLAACSGEMAGNDAAGFFSDEHASNLNFGWCASGNEGWE

Transcript Sequence

Transcript ID	Os03t0188900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:4653461:4654743:1 gene:Os03g0188900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 13 description:Similar to HAHB-7 (Fragment). (Os03t0188900-01);Similar to cDNA clone:001-200-F05, full insert sequence. (Os03t0188900-02)
Sequence	AGGAGAGGACCTGGCGTTCTCTGAGGAGGGCAGCTTGCCCGCGGTGACCATGGAGCAGAA AGATGAAGCCGAGATGGAGGAGGTGGACGAGGAGGAGGAGGAGGAGGTCGACGAAGACAT GGCCGGCGGGCACGCGGCGCAGTCGCCGTCGCCGTCGTGCGGGCTGGGCGAGAAGAAGCG GCGGCTGGCGCTGGAGCAGGTGCGCGCTCTGGAGCGGAGCTTCGACACGGACAACAAGCT GGACCCGGACCGCAAGGCCCGCATCGCGCGCGACCTCGGCCTGCAGCCGCGCCAGGTCGC CGTCTGGTTCCAGAACCGCCGCGCCCGGTGGAAGACGAAGCAGCTCGAGCGCGACTTCGC CGCCCTCCGCGCCCGCCACGACGCCCTCCGCGCCGACTGCGACGCCCTGCGCCGCGACAA GGACGCCCTCGCCGCCGAGATTCGGGAGCTGAGGGAGAAGCTGCCCACCAAGCCGGCGGA CACGGCGGCATCGGTGAAGGTAGAAGCCGGCAATGACGCGGCGGCCGGCGCCGCGGCCGC CACGGTGTGCAAGGACGGCTCGTCGGACGACAGCGACTCCAGCGTGGTGTTCAACGACGA GGCGTCGCCGTACTCCGGCGCGGCCTTCATTGGATTCGGCCCGTCGTTCTTGGTCGACGA CGCGTCGGCGGCAACCGTGGGCTGCTCGTCGTCGCTCCCCGCGCTCGAGTCCAAATGGCA CGGTCCGTACTCCGACGACTCGTGCAAAGGCGGCGTCTATGGCTTCACGGAGGAATGGCT CGCTGCCTGCTCCGGCGAGATGGCCGGCAACGACGCCGCCGGCTTCTTCTCCGACGAGCA CGCCTCCAACCTCAACTTCGGTTGGTGCGCGAGTGGTAACGAGGGTTGGGAATGAGATTT TGATCTCCACGGTTAGTGTAAAAAATGGCAGGGTTAGTAGCACTGTGCATAACCGCATTG GCGCATTGCATGCTTGGATGGAGCACGTACTTTTAGTTTTTTTACTGTACTCATTTACTA CCGCCTTTGGCTACCTGGCGTGCTTACTGCTAGTACTGTAGCAAAGTAGCAAGAAGTGGA ACGAGCCTAGAGGACGAAATTGATATAGGGTAATTAACGAAGGATCAAGGATGTAAATTT TAAGCCGCCAAGGGGTCGAAGAAGGATAGCACAGGACAGCAAAGCATAGCTGTCTGCGTT TTACT