Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0188400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:4628935:4630514:1 gene:Os03g0188400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 044 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0188400-01)
Sequence	ATGGCGTTAGAGGCCGTGGTGTTTCCGCAGGGCCATTTCGGCTACGGGTGCGGAAGGGAC TCGCCGGCGTACGGGATGCCGTGGTGCGACGTCCTGGCTGCTGCCGGCGGCGGCGGCGGC TTCGGTGAGTTTTACGGAGTGGACGAGTGGGATGACCAGCTGCAGGTCGCCTCCGTGGAT GAGTGGGAGGTGGCATCCAAGGATAACTCGGATGCTTCCACGGAGGGCAAGGCGGCGGCG GCGGAGCGGGCGGAGCCGGTGGCCGCCGGGAGGAGGAAACGGAGGCGGACGAAGGTCGTC AAGAACAAGGAGGAGATCGAGTGCCAGCGGATGACCCACATTGCCGTCGAGCGCAACCGC CGCCGCCAGATGAACGAGTACCTCGCCGTGCTCCGCTCCCTCATGCCGGCGTCCTACTCG CAGAGGGGTGATCAAGCATCGATCGTCGGAGGAGCAATCAACTACGTGAAGGAGCTGGAG CAGCTACTGCAGTCGCTGGAAGTCCAAAAGAGCCTCAAGAACCGCAGCGGCGCCATGGAC GCCGCCGGCGATTCCCCTTTCGCCGGCTTCTTCAGCTTCCCACAGTACTCCACGTCGCCT CGCACTGGCTGCAGCGCCGCCGCCAGCGCCGGGAGCTCCGGCAGTGCGAGCAGCGTCGTC ATGGACGACACGGCGGGCTCCGCGGAGAGCGGCCGGCAGTCGGCGGCCATCGCCGACATC GAGGTGACCATGGTGGAAGGGCACGCGAGCCTCAAGGTGCTCGCGCGGCGGCGACCGAAG CAGCTGCTGAAGCTGGTCGTCGGGCTGCAGCAGCTGCGCATCCCGCCGCTGCATCTCAAC GTGACCACCGTCGACGCCATGGTCCTCTACTCCTTCAGCCTCAAGGTGGAGGATGATTCC AAGCTGGGCTCTGTGGAAGACATTGCCACCGCTGTGCATCAGATCCTGGGCAGCATTCAG CAGCAGGAGGCCGTCCTCTCCATCAGCTGA

Peptide Sequence

PEP ID	Os03t0188400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:4628935:4630514:1 gene:Os03g0188400 transcript:Os03t0188400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 044 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0188400-01)
Sequence	MALEAVVFPQGHFGYGCGRDSPAYGMPWCDVLAAAGGGGGFGEFYGVDEWDDQLQVASVD EWEVASKDNSDASTEGKAAAAERAEPVAAGRRKRRRTKVVKNKEEIECQRMTHIAVERNR RRQMNEYLAVLRSLMPASYSQRGDQASIVGGAINYVKELEQLLQSLEVQKSLKNRSGAMD AAGDSPFAGFFSFPQYSTSPRTGCSAAASAGSSGSASSVVMDDTAGSAESGRQSAAIADI EVTMVEGHASLKVLARRRPKQLLKLVVGLQQLRIPPLHLNVTTVDAMVLYSFSLKVEDDS KLGSVEDIATAVHQILGSIQQQEAVLSIS

Transcript Sequence

Transcript ID	Os03t0188400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:4628935:4630514:1 gene:Os03g0188400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 044 description:Helix-loop-helix DNA-binding domain containing protein. (Os03t0188400-01)
Sequence	AACTCACTCTTTAATTCGCCTCCCCCTGAATCGTGTGCGTATCGTATCGTGGCGTCGTCA GTTCGCGAAAAAAAACGCCCGTTCGTTTTGCCGGGTGCGTGCAGGATGGCGTTAGAGGCC GTGGTGTTTCCGCAGGGCCATTTCGGCTACGGGTGCGGAAGGGACTCGCCGGCGTACGGG ATGCCGTGGTGCGACGTCCTGGCTGCTGCCGGCGGCGGCGGCGGCTTCGGTGAGTTTTAC GGAGTGGACGAGTGGGATGACCAGCTGCAGGTCGCCTCCGTGGATGAGTGGGAGGTGGCA TCCAAGGATAACTCGGATGCTTCCACGGAGGGCAAGGCGGCGGCGGCGGAGCGGGCGGAG CCGGTGGCCGCCGGGAGGAGGAAACGGAGGCGGACGAAGGTCGTCAAGAACAAGGAGGAG ATCGAGTGCCAGCGGATGACCCACATTGCCGTCGAGCGCAACCGCCGCCGCCAGATGAAC GAGTACCTCGCCGTGCTCCGCTCCCTCATGCCGGCGTCCTACTCGCAGAGGGGTGATCAA GCATCGATCGTCGGAGGAGCAATCAACTACGTGAAGGAGCTGGAGCAGCTACTGCAGTCG CTGGAAGTCCAAAAGAGCCTCAAGAACCGCAGCGGCGCCATGGACGCCGCCGGCGATTCC CCTTTCGCCGGCTTCTTCAGCTTCCCACAGTACTCCACGTCGCCTCGCACTGGCTGCAGC GCCGCCGCCAGCGCCGGGAGCTCCGGCAGTGCGAGCAGCGTCGTCATGGACGACACGGCG GGCTCCGCGGAGAGCGGCCGGCAGTCGGCGGCCATCGCCGACATCGAGGTGACCATGGTG GAAGGGCACGCGAGCCTCAAGGTGCTCGCGCGGCGGCGACCGAAGCAGCTGCTGAAGCTG GTCGTCGGGCTGCAGCAGCTGCGCATCCCGCCGCTGCATCTCAACGTGACCACCGTCGAC GCCATGGTCCTCTACTCCTTCAGCCTCAAGGTGGAGGATGATTCCAAGCTGGGCTCTGTG GAAGACATTGCCACCGCTGTGCATCAGATCCTGGGCAGCATTCAGCAGCAGGAGGCCGTC CTCTCCATCAGCTGACGCCGCGATCGATGGAGACGACAACCGAGACGGCCGCCATGTGAA GCCTCTGCCTCGTCCGTCCTGGAAATGGAACCATGGCGCCTCGATCGATAGCTTGTTAGC TTGTAATGTGTGAATGTGATTGTACCCTAGCCAACAGAGTGCTGCATGCATGCAGTATCT CCGGCGACCTTAATGAGAAATCTATACCAACATTTTGAGCTCTTGTAAACGT