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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0187800-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4598924:4600430:-1 gene:Os03g0187800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURINE PERMEASE 1 description:Protein of unknown function DUF250 domain containing protein. (Os03t0187800-01)
Sequence

ATGGCCACCATTACTGCTGCTAGTCCCAGACCCAGTGCTGCTCCTGCAGCCATGGAAGAG
ACCAGCAAGGCGATGCCTACTAGCGAGTGGCCTGCCGCCAGCGGCGGCAATGCGTCGCCG
CCGGCGAGGTCCCGGCCGTCGCTGCTGGTCATATTCAGCGCGTGCCTCGTCCTCCTCGGC
GCCGGCGGGCCGCTCCTCCTCCGCGTCTACTTCGTGCACGGCGGGACCCGGCTGTGGCTG
TCCGCCACGCTCCAGATCTCCGGCTGGCCGCTGCTGCTGCCGCCGCTGTGCGTGTCGCTC
TACCGCGGCCGCAGGCACGGGATCGGCAACCTCCTCCTCCCGCGGCGCCTCGTCGGCGCC
GCCGCCGTGCTCGGCGGGCTGTACGCCGTGTCGTGCTTCGTGTACGCGCTGGGGTCGCAG
GCGCTGCCGCTGTCCACGTCGTCGCTGCTGCTGGCGACGCAGCTGGCCTTCACCGCCGTG
TTCGCGTTCCTCTTCGTGGGCCTCCGGTTCACGCCGTTCTCGGCCAACGCCGTCGTGCTG
CTCACCATCGGCCCGGCGGTGCTGGGCGTCGGGCCGTCGTCGGGGAAGCCGGCGGGGGAG
TCCTCCAGGGCGTACTGGACGGGGTTCTGCGAGGCCATCGGCGCGGCGGCGCTAGCCGGG
CTGGTGATCCCGCTCGTCGAGGTCGCCACGGCGAGGTACGGGCGCCGCACGGGGCCCGCG
GCGAGGGTGCCGCCTCCCTACGCGACGGTGATGCAGATGCAGGCGGTGATGGGCGCGGCG
GGCACGGCGGTGTGCGTGCTCGGCATGGCGATCAAGGGCGACTTCCAGGCGGTGGCGCGG
GAAGCGGCGGCGTTCGGGCTCGGCGCGGCCAACTACTACCTCGTCCTCGCCTGGGACGCC
GTGTCGTGGCAGCTGCTCAACCTGGGCATCATGGGGCTCATCACCTGCGCGTCGTCGCTG
CTCGCCGGCATCATGATCGCCGTGCTCCTGCCGCTCTCGCAGGTCCTCGCCGTCATCTTC
CTCCACGAGAAGTTCGACGGGACGAAGGGCATCGCGCTCGTGCTCTCGCTCTGGGGATTC
GCCTCCTACCTCTACGGCGAGAAGGCGCAGAAGAAGAAGGAGGCGCAGAAGATGCGCGAG
CGCGAGCAGGAGGTGGCGCTGGCACAGAAGACCGCAGACGTGGAGTCAGCGGCGCCTTAG

Peptide Sequence

PEP ID

Os03t0187800-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4598924:4600430:-1 gene:Os03g0187800 transcript:Os03t0187800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURINE PERMEASE 1 description:Protein of unknown function DUF250 domain containing protein. (Os03t0187800-01)
Sequence

MATITAASPRPSAAPAAMEETSKAMPTSEWPAASGGNASPPARSRPSLLVIFSACLVLLG
AGGPLLLRVYFVHGGTRLWLSATLQISGWPLLLPPLCVSLYRGRRHGIGNLLLPRRLVGA
AAVLGGLYAVSCFVYALGSQALPLSTSSLLLATQLAFTAVFAFLFVGLRFTPFSANAVVL
LTIGPAVLGVGPSSGKPAGESSRAYWTGFCEAIGAAALAGLVIPLVEVATARYGRRTGPA
ARVPPPYATVMQMQAVMGAAGTAVCVLGMAIKGDFQAVAREAAAFGLGAANYYLVLAWDA
VSWQLLNLGIMGLITCASSLLAGIMIAVLLPLSQVLAVIFLHEKFDGTKGIALVLSLWGF
ASYLYGEKAQKKKEAQKMREREQEVALAQKTADVESAAP

Transcript Sequence

Transcript ID

Os03t0187800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4598924:4600430:-1 gene:Os03g0187800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURINE PERMEASE 1 description:Protein of unknown function DUF250 domain containing protein. (Os03t0187800-01)
Sequence

ACCCAAGCAGATTAAGCTAATTAACTACCATCAACACACCCTAATCCAAAGGTGCCAAGC
TTGCAGGAAACAGTAAGCTAGCTAGCAGTCTAGCACTGCTTCATTTGATCATGGCCACCA
TTACTGCTGCTAGTCCCAGACCCAGTGCTGCTCCTGCAGCCATGGAAGAGACCAGCAAGG
CGATGCCTACTAGCGAGTGGCCTGCCGCCAGCGGCGGCAATGCGTCGCCGCCGGCGAGGT
CCCGGCCGTCGCTGCTGGTCATATTCAGCGCGTGCCTCGTCCTCCTCGGCGCCGGCGGGC
CGCTCCTCCTCCGCGTCTACTTCGTGCACGGCGGGACCCGGCTGTGGCTGTCCGCCACGC
TCCAGATCTCCGGCTGGCCGCTGCTGCTGCCGCCGCTGTGCGTGTCGCTCTACCGCGGCC
GCAGGCACGGGATCGGCAACCTCCTCCTCCCGCGGCGCCTCGTCGGCGCCGCCGCCGTGC
TCGGCGGGCTGTACGCCGTGTCGTGCTTCGTGTACGCGCTGGGGTCGCAGGCGCTGCCGC
TGTCCACGTCGTCGCTGCTGCTGGCGACGCAGCTGGCCTTCACCGCCGTGTTCGCGTTCC
TCTTCGTGGGCCTCCGGTTCACGCCGTTCTCGGCCAACGCCGTCGTGCTGCTCACCATCG
GCCCGGCGGTGCTGGGCGTCGGGCCGTCGTCGGGGAAGCCGGCGGGGGAGTCCTCCAGGG
CGTACTGGACGGGGTTCTGCGAGGCCATCGGCGCGGCGGCGCTAGCCGGGCTGGTGATCC
CGCTCGTCGAGGTCGCCACGGCGAGGTACGGGCGCCGCACGGGGCCCGCGGCGAGGGTGC
CGCCTCCCTACGCGACGGTGATGCAGATGCAGGCGGTGATGGGCGCGGCGGGCACGGCGG
TGTGCGTGCTCGGCATGGCGATCAAGGGCGACTTCCAGGCGGTGGCGCGGGAAGCGGCGG
CGTTCGGGCTCGGCGCGGCCAACTACTACCTCGTCCTCGCCTGGGACGCCGTGTCGTGGC
AGCTGCTCAACCTGGGCATCATGGGGCTCATCACCTGCGCGTCGTCGCTGCTCGCCGGCA
TCATGATCGCCGTGCTCCTGCCGCTCTCGCAGGTCCTCGCCGTCATCTTCCTCCACGAGA
AGTTCGACGGGACGAAGGGCATCGCGCTCGTGCTCTCGCTCTGGGGATTCGCCTCCTACC
TCTACGGCGAGAAGGCGCAGAAGAAGAAGGAGGCGCAGAAGATGCGCGAGCGCGAGCAGG
AGGTGGCGCTGGCACAGAAGACCGCAGACGTGGAGTCAGCGGCGCCTTAGTTTACAATGG
GATTGTACGTGTCTACTTGGGTGGGTCGTATACATATTTACGGGTGTAGTGAACATGTTT
CTCAGTGTAGTTTTACAGTACAGTGGCATGCATAAATTTTGTACGAGATTGTTTCAAATT
CTGTATGACATTGTTTCATTATATGGTACTAGCACGCAGAAAAAGCAAGTGCTATAGTTG
TATCAAC