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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0187700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4596108:4598257:1 gene:Os03g0187700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Target SNARE coiled-coil region domain containing protein. (Os03t0187700-01)
Sequence

ATGGCGAGCGGCGCCTACGGTTCAAGGGAAGGGCTGACGGCCAGGCCGGCTGCATCATCA
AGCTCCAGCGAGATTTCGCTCCAGATCGACCCAATTACCGCTGATTTGGATGACCATATT
GTCGGACTTCGTGGGCAAGTCCGTAAGCTAAGAGGGGTTGCCCAAGAGATCCAAACAGAG
GCCAAGTACCAAAATGATTTCATCTCTCAGCTGCAAATGACTCTGACAAAGGCCCAGGCA
GGCGTCAAGAATAACATGAGGAGAATAAACAAGAAAATCATACAGAATGGTTCGAACCAT
CTTTTTCATGTAATCCTCTTCGCTCTCGTCTGCTTCTTTCTAGTGTACCTCGTGTCCAAG
TTCTCTAGGAGATGA

Peptide Sequence

PEP ID

Os03t0187700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4596108:4598257:1 gene:Os03g0187700 transcript:Os03t0187700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Target SNARE coiled-coil region domain containing protein. (Os03t0187700-01)
Sequence

MASGAYGSREGLTARPAASSSSSEISLQIDPITADLDDHIVGLRGQVRKLRGVAQEIQTE
AKYQNDFISQLQMTLTKAQAGVKNNMRRINKKIIQNGSNHLFHVILFALVCFFLVYLVSK
FSRR

Transcript Sequence

Transcript ID

Os03t0187700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4596108:4598257:1 gene:Os03g0187700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Target SNARE coiled-coil region domain containing protein. (Os03t0187700-01)
Sequence

GTCGCTGGGAAATTTGCAGCCTCGATCTCCGCCCGGGAAGACGCGGATCCGGAGGAGGAA
AGCAGCATCGGTCTCCATCTCCTCGGGCTCAATCTTTCGTGGTCTCCCTCTTCTGATCTC
GCAATGGCGAGCGGCGCCTACGGTTCAAGGGAAGGGCTGACGGCCAGGCCGGCTGCATCA
TCAAGCTCCAGCGAGATTTCGCTCCAGATCGACCCAATTACCGCTGATTTGGATGACCAT
ATTGTCGGACTTCGTGGGCAAGTCCGTAAGCTAAGAGGGGTTGCCCAAGAGATCCAAACA
GAGGCCAAGTACCAAAATGATTTCATCTCTCAGCTGCAAATGACTCTGACAAAGGCCCAG
GCAGGCGTCAAGAATAACATGAGGAGAATAAACAAGAAAATCATACAGAATGGTTCGAAC
CATCTTTTTCATGTAATCCTCTTCGCTCTCGTCTGCTTCTTTCTAGTGTACCTCGTGTCC
AAGTTCTCTAGGAGATGATGAAGCACCAAGACCTGACAAAAGGGAGAGATCGAGTAAAAT
GTTAGTTGGTACCTCCGTCAATGGCAGTTGGCAGACACTGTGTTTTGAGGTTCATGTTAC
AGTACTACGGCAGAATAAGTTGATAGTTGGTGAAAAAAAGTGTCATTCCCCTGTATCTTG
TACAAGAATTCCATATTCCATGACAATGTGAATATATTCCATGATGTTTGGGCCC