Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0183800-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:4399762:4402933:1 gene:Os03g0183800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine-rich repeat transmembrane protein kinase 1 (Fragment). (Os03t0183800-01);Similar to Leucine-rich repeat transmembrane protein kinase 1 (Fragment). (Os03t0183800-02)
Sequence	GTTGCAAACAATCATTTCACTGGCTGGATTCCTAGTCAACTTAAGAAGATAAACAATCTA CAAACTGACGGAAATTCTTGGAGTAATGGACCAGCACCACCACCTCCACCGTATTCAGCT CCACCTCCACCAAACCGTCCAAACAGCCCAGGTCAAAACAATGGTGGTTCAAGTTCTGGT GGAAGCTCTGGGATAGGTGGTGGAGGTGTAGCAGGCATTATCATATCATTGCTGGTAGTT GGAGCAGTCGTTGCATTCTTTGTGATAAGAAGAAGAAAACGCAGAGCGGCATTGGAAGAA CATTTTGAACAGCACCAGCCATTCACTTCGTTCCCTTCAAACGAAGTTAAAGACATGAAG CCTATTGAAGAGTCTACTACAATAGATGTAGAGTCTTTGCCATCCCCTGCTTCATTTAGT CTGAAGCCACCCCCCAAGATTGAACGCCACAAGTCTTTCGATGATGATGATTTATCAAAC AAGCCTGTCTTGAAGAAAACCAATGTGGCACCTATAAAGGCAACTGTTTATTCAGTTGCA GATCTACAGATGGCAACAGAAAGCTTTAGCATGGACAACCTTGTTGGGGAAGGTACTTTT GGACGTGTATACAGGGCACAGTTTACTGGTGGAAAGGTTCTGGCCGTGAAGAAACTTGAT AGTACCGTGATGCCATTCCATTCATCTGATGATTTTGCTGAACTGGTCTCAGACATTTCA AAACTGCATCATCCGAATCTCAATGAGCTTGTGGGCTATTGCATGGAACATGGGCAACAC TTGCTTGTTTACGATTTCCACAGGAATGGGTCACTCCATGATCTACTCCATCTTTCAGAC GAATACAGCAAGCCACTTAGCTGGAACTCTCGTGTCAAGATCGCACTAGGCTCTGCCCGT GCACTGGAATATCTTCATGAAATTTGTTCTCCATCCATCATCCATAAGAATTTCAAGTCA TCCAACCTTCTACTGGATTCAGAATTCAATCCACACCTTTCAGATGCTGGACTTGCAAGC TTTATTTCTGATGCAGAATTCCAGGCAGCGCAACAGAGTGCTGGGTGCACTGCCCCAGAG GTGGACATGACTGGTCAGTACACACTGAAGAGCGATGTCTACAGCTTTGGAGTAGTCATG CTAGAGCTTTTGACGGGACGCAGACCTTTCGATAGCACTAGACCGAGGTCAGAGCAGTCA CTTGTGCGGTGGGCGACTCCACAGCTCCATGACATCGATGCATTGGACAGAATGGTCGAT CCTGCGCTGAAGGGTCTGTACCCTGCCAAGTCTCTCTCCCGGTTTGCCGACGTGCTCGCT TTGTGTGTCCAGCCTGAACCAGAATTCAGGCCACCAATGTCAGAGGTGGTGCAAGCATTG GTTCGTCTTGTCCAGAGGGCCAACATGACGAAGAGAATGCTCGACGGAGATACTTCGTCG CGCCGAACAGACGACCAAGAACAAGATTTCATATGA

Peptide Sequence

PEP ID	Os03t0183800-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:4399762:4402933:1 gene:Os03g0183800 transcript:Os03t0183800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine-rich repeat transmembrane protein kinase 1 (Fragment). (Os03t0183800-01);Similar to Leucine-rich repeat transmembrane protein kinase 1 (Fragment). (Os03t0183800-02)
Sequence	VANNHFTGWIPSQLKKINNLQTDGNSWSNGPAPPPPPYSAPPPPNRPNSPGQNNGGSSSG GSSGIGGGGVAGIIISLLVVGAVVAFFVIRRRKRRAALEEHFEQHQPFTSFPSNEVKDMK PIEESTTIDVESLPSPASFSLKPPPKIERHKSFDDDDLSNKPVLKKTNVAPIKATVYSVA DLQMATESFSMDNLVGEGTFGRVYRAQFTGGKVLAVKKLDSTVMPFHSSDDFAELVSDIS KLHHPNLNELVGYCMEHGQHLLVYDFHRNGSLHDLLHLSDEYSKPLSWNSRVKIALGSAR ALEYLHEICSPSIIHKNFKSSNLLLDSEFNPHLSDAGLASFISDAEFQAAQQSAGCTAPE VDMTGQYTLKSDVYSFGVVMLELLTGRRPFDSTRPRSEQSLVRWATPQLHDIDALDRMVD PALKGLYPAKSLSRFADVLALCVQPEPEFRPPMSEVVQALVRLVQRANMTKRMLDGDTSS RRTDDQEQDFI

Transcript Sequence

Transcript ID	Os03t0183800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:4399762:4402933:1 gene:Os03g0183800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine-rich repeat transmembrane protein kinase 1 (Fragment). (Os03t0183800-01);Similar to Leucine-rich repeat transmembrane protein kinase 1 (Fragment). (Os03t0183800-02)
Sequence	ATGTTGCAAACAATCATTTCACTGGCTGGATTCCTAGTCAACTTAAGAAGATAAACAATC TACAAACTGACGGAAATTCTTGGAGTAATGGACCAGCACCACCACCTCCACCGTATTCAG CTCCACCTCCACCAAACCGTCCAAACAGCCCAGGTCAAAACAATGGTGGTTCAAGTTCTG GTGGAAGCTCTGGGATAGGTGGTGGAGGTGTAGCAGGCATTATCATATCATTGCTGGTAG TTGGAGCAGTCGTTGCATTCTTTGTGATAAGAAGAAGAAAACGCAGAGCGGCATTGGAAG AACATTTTGAACAGCACCAGCCATTCACTTCGTTCCCTTCAAACGAAGTTAAAGACATGA AGCCTATTGAAGAGTCTACTACAATAGATGTAGAGTCTTTGCCATCCCCTGCTTCATTTA GTCTGAAGCCACCCCCCAAGATTGAACGCCACAAGTCTTTCGATGATGATGATTTATCAA ACAAGCCTGTCTTGAAGAAAACCAATGTGGCACCTATAAAGGCAACTGTTTATTCAGTTG CAGATCTACAGATGGCAACAGAAAGCTTTAGCATGGACAACCTTGTTGGGGAAGGTACTT TTGGACGTGTATACAGGGCACAGTTTACTGGTGGAAAGGTTCTGGCCGTGAAGAAACTTG ATAGTACCGTGATGCCATTCCATTCATCTGATGATTTTGCTGAACTGGTCTCAGACATTT CAAAACTGCATCATCCGAATCTCAATGAGCTTGTGGGCTATTGCATGGAACATGGGCAAC ACTTGCTTGTTTACGATTTCCACAGGAATGGGTCACTCCATGATCTACTCCATCTTTCAG ACGAATACAGCAAGCCACTTAGCTGGAACTCTCGTGTCAAGATCGCACTAGGCTCTGCCC GTGCACTGGAATATCTTCATGAAATTTGTTCTCCATCCATCATCCATAAGAATTTCAAGT CATCCAACCTTCTACTGGATTCAGAATTCAATCCACACCTTTCAGATGCTGGACTTGCAA GCTTTATTTCTGATGCAGAATTCCAGGCAGCGCAACAGAGTGCTGGGTGCACTGCCCCAG AGGTGGACATGACTGGTCAGTACACACTGAAGAGCGATGTCTACAGCTTTGGAGTAGTCA TGCTAGAGCTTTTGACGGGACGCAGACCTTTCGATAGCACTAGACCGAGGTCAGAGCAGT CACTTGTGCGGTGGGCGACTCCACAGCTCCATGACATCGATGCATTGGACAGAATGGTCG ATCCTGCGCTGAAGGGTCTGTACCCTGCCAAGTCTCTCTCCCGGTTTGCCGACGTGCTCG CTTTGTGTGTCCAGCCTGAACCAGAATTCAGGCCACCAATGTCAGAGGTGGTGCAAGCAT TGGTTCGTCTTGTCCAGAGGGCCAACATGACGAAGAGAATGCTCGACGGAGATACTTCGT CGCGCCGAACAGACGACCAAGAACAAGATTTCATATGACAAAAACTACACCCCTAGCTTT TCCTGTTACATCTCAAATTGTATTTATTTTGTTCGCCTATCGCCTATTGGAGAGAAGAAT GGAAGGAGAAATAGAAAAGAAAGTCAGTTTCATCAGTACATAATCACAGGTGTTGCTTGA TATATTGTAGGACCAGGTGTGCCATTGTATCCTGTCTACAGAACAGTATTCTGAATTCCT GATTGTTCATTAATGCCATCATGGTAGTAGATTATTTGGTT