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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0182700-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:4339485:4342714:-1 gene:Os03g0182700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC INITIATION FACTOR 3K description:Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k). (Os03t0182700-02)
Sequence

ATGGCGAGCGAGCAGGCGGCGGAGAGCTACACGGTGGAGGAGCTCGTCGCCGTGAACCCC
TACAACCCCGACATCCTCAACGACCTCGAGGGCTTCGTCAACGATCAGGTTTCCAACCAA
ACATATAACTTGGATGCAAATCTTAGTCTTCTTCGTCTGTACCAGTTCGAACCAGAAAGG
TTGAGTGTGCAGATTGTATCTCGCATATTGATTAAGGCTCTCATGGCAATGCCAGGCCCG
GACTTCAGCCTATGCTTATTCTTAATTCCAGAGCATGTGCAAATGGAGGAACAGTTCAAG
ACGTTGATAGTTCTCTCTCACTACCTGGAGACTGCTAGGTTCCGTCAATTTTGGGATGAG
GCGTCGAAGAACCGCAACATATTGGATGTTGTTCCAGGTTTTGAGCAGGCAATCCAATCC
TATGCGATACATGTGCTCTCCTTGACATACCAGAAAGTTCCTAGGCCTGTTCTTGCGGAG
GCCATCAACATTGAGGGTCTTGCATTGGACAAGTTCCTGGAGCACCATATTGCAAACTCC
GGTTGGGTGATCGAGAAGGGTGCACGATCTCAGCTGATTGTCCTTCCACGCAACGAGTTC
AATCACCCTGAGCTCAAGAAGAACACAGCTGAAACTGTTCCGTTCGAGCATGTAACTCGC
ATATTCCCTGTCCTTAGCTGA

Peptide Sequence

PEP ID

Os03t0182700-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:4339485:4342714:-1 gene:Os03g0182700 transcript:Os03t0182700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC INITIATION FACTOR 3K description:Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k). (Os03t0182700-02)
Sequence

MASEQAAESYTVEELVAVNPYNPDILNDLEGFVNDQVSNQTYNLDANLSLLRLYQFEPER
LSVQIVSRILIKALMAMPGPDFSLCLFLIPEHVQMEEQFKTLIVLSHYLETARFRQFWDE
ASKNRNILDVVPGFEQAIQSYAIHVLSLTYQKVPRPVLAEAINIEGLALDKFLEHHIANS
GWVIEKGARSQLIVLPRNEFNHPELKKNTAETVPFEHVTRIFPVLS

Transcript Sequence

Transcript ID

Os03t0182700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4339485:4342714:-1 gene:Os03g0182700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC INITIATION FACTOR 3K description:Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k). (Os03t0182700-02)
Sequence

CACGAACCCGAAAACCCTTTTCTCCATCGCCTCCCCCTCCGCCGCGCCGCCACTTCTCTC
CTCTCCTCCTCTCGCCGCTCCCAGGGTTTCGCGCGAGATCTACTCTAGCATTCGGGCGTT
AGGGTTCCCCGAGATGGCGAGCGAGCAGGCGGCGGAGAGCTACACGGTGGAGGAGCTCGT
CGCCGTGAACCCCTACAACCCCGACATCCTCAACGACCTCGAGGGCTTCGTCAACGATCA
GGTTTCCAACCAAACATATAACTTGGATGCAAATCTTAGTCTTCTTCGTCTGTACCAGTT
CGAACCAGAAAGGTTGAGTGTGCAGATTGTATCTCGCATATTGATTAAGGCTCTCATGGC
AATGCCAGGCCCGGACTTCAGCCTATGCTTATTCTTAATTCCAGAGCATGTGCAAATGGA
GGAACAGTTCAAGACGTTGATAGTTCTCTCTCACTACCTGGAGACTGCTAGGTTCCGTCA
ATTTTGGGATGAGGCGTCGAAGAACCGCAACATATTGGATGTTGTTCCAGGTTTTGAGCA
GGCAATCCAATCCTATGCGATACATGTGCTCTCCTTGACATACCAGAAAGTTCCTAGGCC
TGTTCTTGCGGAGGCCATCAACATTGAGGGTCTTGCATTGGACAAGTTCCTGGAGCACCA
TATTGCAAACTCCGGTTGGGTGATCGAGAAGGGTGCACGATCTCAGCTGATTGTCCTTCC
ACGCAACGAGTTCAATCACCCTGAGCTCAAGAAGAACACAGCTGAAACTGTTCCGTTCGA
GCATGTAACTCGCATATTCCCTGTCCTTAGCTGAGTCAACAACCAGACCAACTGAGATTT
TGCATTACAGAACTTCTGAGCGCGTGAAGATACTCTGGGCGCATCTGTTTTCTCTGCTGT
GATGTACTGCGTTTTGATATGCCTGTTTTAGCTAAACAAGTCAATTCTAGTGACGATCCG
AGCGTCATATCTGCCTAGTTATGTTTATGTAAGCATTCTGCCATGATATTACATTGTTGG
CAAGATATTTTATCAGGTCAGAGC