Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0181500-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:4266978:4271778:1 gene:Os03g0181500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ONION1 description:Fatty acid elongase (beta-ketoacyl-CoA synthase), Shoot development (Os03t0181500-01);Similar to (Rice Genome Annotation Project) fiddlehead-like protein. (Os03t0181500-02)
Sequence	ATGGCGAGGGAGCAGGCGCTGCTGTTGACGGAGATCGTGAACCGCGGCGTGGAGCCGTCG GGGCCGGACGCCGGGTCGCCGACGTTCTCGGTGCGGGTGCGGCGGCGGCTGCCGGACTTC CTCCAGTCGGTGAACCTCAAGTACGTGCGGCTCGGGTACCACTACCTCATCAGCCACGGC GTGTACCTGGCCACCATCCCGGTCATCGTGCTCGTCTGCGGCGCCGAGGTCGGCAGCCTC AGCCGAGACGAGCTGTGGCGCAAGGTCTGGGGCGAGGCCACCTACGACCTCGCCACCGTC CTCGCCTTCCTCGCCGTCCTCGCCTTCACCATCTCCGTCTACATCATGTCCAGGCCTAGG CCCGTCTACCTCATCGACTTCGCCTGCTACAAACCAGCCGACGAACTCAAGGTGTCGAAG GCGGAGTTCATCGATCTGGCGAGGAAGTCGGGCAAGTTCGACGAGGATAGCCTGGCGTTC CAGTCGCGGCTGCTGGCCAAGTCTGGCATCGGCGACGAGTCCTACATGCCGCGCTGCGTG TTCGAGCCGGGCACCAACTGCGCCACCATGAAGGAAGGCCGCGCCGAGGCGTCCGCCGCC ATGTTCGCCGCGCTGGACGAGCTGTTCGACAAGTGCCGCGTCCGCCCCAAGGACGTCGGC GTGCTCGTCGTCAACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCCGCCATGATCGTC AACCACTACAAGATGCGCGGGAACATCCTCAGCTACAACCTCGGCGGCATGGGGTGCAGC GCCGGCGTCATCGCGGTGGACCTCGCCCGCGACATGCTCCAGGCCAGCGGCGCGGGGCTC GCCGTCGTCGTCAGCACGGAGGCCGTCTCCTTCACCTGGTACGCCGGGAAGCGCCGCTCC ATGCTCATCCCCAACGCCTTCTTCCGCGCCGGCTGCGCCGCCGTGCTGCTCTCCAACCGC CGCAGGGACTTCCACCGCGCCAAGTACCAGCTCGAGCACATCGTGCGCACCCACAAGGGC GCCGACGACCGCAGCTTCCGGTCGGTGTACCAGGAGGAGGACGAGCAGCGGATCAAGGGC CTGTCCATCAGCCGCGACCTCGTGGAGGTCGGCGGCCACGCGCTCAAGACCAACATCACC ACCCTGGGCCCGCTCGTGCTTCCGTTCTCGGAGCAGATCCTCTTCTTCGCCGGCGTGCTC TTCCGCCACCTGTTCCCGTCCAAGACCTCCGCCCCGCCGCCGCCGTCCGCCGACGGCGAC GCCTCCGCCGCCGCTCCCTACATCCCGGACTTCAAGCGCGCGTTCGAGCACTTCTGCATG CACGCGGCGAGCCGCGACGTGCTGGAGCACCTGCAGGGCAACCTGGGCCTCCGCGACGGC GACCTGGAGGCGTCGCGCGCCGCGCTCCACCGCTTCGGCAACACGTCGAGCAGCAGCATC TGGTACGAGCTGGCGTACCTGGAGGCCAAGGGCCGCGTCCGCCGCGGCGACCGCGTGTGG CAGCTCGCCTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTGTGGCGCGCCGTCCGCCGC GTGCGCCGCCCGGCGCGCAGCCCGTGGCTGGACTGCGTCGAGCAGTACCCGGCTCGCATG AACGCTTAA

Peptide Sequence

PEP ID	Os03t0181500-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:4266978:4271778:1 gene:Os03g0181500 transcript:Os03t0181500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ONION1 description:Fatty acid elongase (beta-ketoacyl-CoA synthase), Shoot development (Os03t0181500-01);Similar to (Rice Genome Annotation Project) fiddlehead-like protein. (Os03t0181500-02)
Sequence	MAREQALLLTEIVNRGVEPSGPDAGSPTFSVRVRRRLPDFLQSVNLKYVRLGYHYLISHG VYLATIPVIVLVCGAEVGSLSRDELWRKVWGEATYDLATVLAFLAVLAFTISVYIMSRPR PVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMPRCV FEPGTNCATMKEGRAEASAAMFAALDELFDKCRVRPKDVGVLVVNCSLFNPTPSLSAMIV NHYKMRGNILSYNLGGMGCSAGVIAVDLARDMLQASGAGLAVVVSTEAVSFTWYAGKRRS MLIPNAFFRAGCAAVLLSNRRRDFHRAKYQLEHIVRTHKGADDRSFRSVYQEEDEQRIKG LSISRDLVEVGGHALKTNITTLGPLVLPFSEQILFFAGVLFRHLFPSKTSAPPPPSADGD ASAAAPYIPDFKRAFEHFCMHAASRDVLEHLQGNLGLRDGDLEASRAALHRFGNTSSSSI WYELAYLEAKGRVRRGDRVWQLAFGSGFKCNSAVWRAVRRVRRPARSPWLDCVEQYPARM NA

Transcript Sequence

Transcript ID	Os03t0181500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:4266978:4271778:1 gene:Os03g0181500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ONION1 description:Fatty acid elongase (beta-ketoacyl-CoA synthase), Shoot development (Os03t0181500-01);Similar to (Rice Genome Annotation Project) fiddlehead-like protein. (Os03t0181500-02)
Sequence	ACTTCACTGCCTTCTCATTTACTGCAGAAGGTGAAGGTGAAGGAGGAGGCGGCCATGGCG AGGGAGCAGGCGCTGCTGTTGACGGAGATCGTGAACCGCGGCGTGGAGCCGTCGGGGCCG GACGCCGGGTCGCCGACGTTCTCGGTGCGGGTGCGGCGGCGGCTGCCGGACTTCCTCCAG TCGGTGAACCTCAAGTACGTGCGGCTCGGGTACCACTACCTCATCAGCCACGGCGTGTAC CTGGCCACCATCCCGGTCATCGTGCTCGTCTGCGGCGCCGAGGTCGGCAGCCTCAGCCGA GACGAGCTGTGGCGCAAGGTCTGGGGCGAGGCCACCTACGACCTCGCCACCGTCCTCGCC TTCCTCGCCGTCCTCGCCTTCACCATCTCCGTCTACATCATGTCCAGGCCTAGGCCCGTC TACCTCATCGACTTCGCCTGCTACAAACCAGCCGACGAACTCAAGGTGTCGAAGGCGGAG TTCATCGATCTGGCGAGGAAGTCGGGCAAGTTCGACGAGGATAGCCTGGCGTTCCAGTCG CGGCTGCTGGCCAAGTCTGGCATCGGCGACGAGTCCTACATGCCGCGCTGCGTGTTCGAG CCGGGCACCAACTGCGCCACCATGAAGGAAGGCCGCGCCGAGGCGTCCGCCGCCATGTTC GCCGCGCTGGACGAGCTGTTCGACAAGTGCCGCGTCCGCCCCAAGGACGTCGGCGTGCTC GTCGTCAACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCCGCCATGATCGTCAACCAC TACAAGATGCGCGGGAACATCCTCAGCTACAACCTCGGCGGCATGGGGTGCAGCGCCGGC GTCATCGCGGTGGACCTCGCCCGCGACATGCTCCAGGCCAGCGGCGCGGGGCTCGCCGTC GTCGTCAGCACGGAGGCCGTCTCCTTCACCTGGTACGCCGGGAAGCGCCGCTCCATGCTC ATCCCCAACGCCTTCTTCCGCGCCGGCTGCGCCGCCGTGCTGCTCTCCAACCGCCGCAGG GACTTCCACCGCGCCAAGTACCAGCTCGAGCACATCGTGCGCACCCACAAGGGCGCCGAC GACCGCAGCTTCCGGTCGGTGTACCAGGAGGAGGACGAGCAGCGGATCAAGGGCCTGTCC ATCAGCCGCGACCTCGTGGAGGTCGGCGGCCACGCGCTCAAGACCAACATCACCACCCTG GGCCCGCTCGTGCTTCCGTTCTCGGAGCAGATCCTCTTCTTCGCCGGCGTGCTCTTCCGC CACCTGTTCCCGTCCAAGACCTCCGCCCCGCCGCCGCCGTCCGCCGACGGCGACGCCTCC GCCGCCGCTCCCTACATCCCGGACTTCAAGCGCGCGTTCGAGCACTTCTGCATGCACGCG GCGAGCCGCGACGTGCTGGAGCACCTGCAGGGCAACCTGGGCCTCCGCGACGGCGACCTG GAGGCGTCGCGCGCCGCGCTCCACCGCTTCGGCAACACGTCGAGCAGCAGCATCTGGTAC GAGCTGGCGTACCTGGAGGCCAAGGGCCGCGTCCGCCGCGGCGACCGCGTGTGGCAGCTC GCCTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTGTGGCGCGCCGTCCGCCGCGTGCGC CGCCCGGCGCGCAGCCCGTGGCTGGACTGCGTCGAGCAGTACCCGGCTCGCATGAACGCT TAAGCTGCAGTGGTAAGTATGCAGAGGCTAATGAACGGAAAATTACTGCAACGTCAAAAG ACGGGATCGGCATGCGATGCCGGTTAAGGTTCAAGCTTGATTAATTTGTGTTGGTGTATT AGCAAGTCGGTTTATGAGCCATAGACTACCATAAAAGTTGTGCGAGACATGTGTACTGAA CCAGTGTACGCGAGTTCGGTGATATGTGAACTTATCTACGTTTGATTCT