Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0181100-02
CDS Infomation

cds chromosome:IRGSP-1.0:3:4248976:4249816:1 gene:Os03g0181100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 11B description:Tify domain containing protein. (Os03t0181100-01);Tify domain containing protein. (Os03t0181100-02)
Sequence

ATGGCGATGGAGGGGAAGAGCAGGAGGTTCGCGGTGGCGTGCGGGGTGCTCAGCCAGTAC
GTGAGGGCGGAGCAGAAGATGGCGGCGGCGGCGGGGGCGGCACCGGCGAGGGCGGTGACG
ACGCTGAGCCTGATGCCTGGGGCGGAGGTGGTCGTCGAGGAGGAGGAGCGGAGGGAGGTT
GGGGAGGAGGAGGCGGGGCCAGCGACGGCGCCGGCCGCGCCGCTGACCATCTTCTACGGT
GGGAGGATGGTCGTCTTCGAGGACTTCCCCGCGGACAAGGCGGCGGAGGTGATGCGCATG
GCCTCCTCCGGGATGGCGGCGGCGCCGGCTCAGCGGGAGGGCGCCGCGCTCGCGGACATG
CCCATCATGAGGAAGGCGTCGCTGCAGCGGTTCTTCGCCAAGCGCAAGGACCGCCTCGCG
GCGACCACCCCCTACGCCCGCCCGTCGCCGGCGGAGACCAAGGCCTCCGAGCCGGAGGAG
AAGAAGACGCCCACCTCATGGCTGGACCTCGCCGCCTCCGCCTCCGCCGCCGCGCGCCGT
GACAGCCTCACCATCGCGCTGTGA

Peptide Sequence

PEP ID

Os03t0181100-02
PEP Infomation

pep chromosome:IRGSP-1.0:3:4248976:4249816:1 gene:Os03g0181100 transcript:Os03t0181100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 11B description:Tify domain containing protein. (Os03t0181100-01);Tify domain containing protein. (Os03t0181100-02)
Sequence

MAMEGKSRRFAVACGVLSQYVRAEQKMAAAAGAAPARAVTTLSLMPGAEVVVEEEERREV
GEEEAGPATAPAAPLTIFYGGRMVVFEDFPADKAAEVMRMASSGMAAAPAQREGAALADM
PIMRKASLQRFFAKRKDRLAATTPYARPSPAETKASEPEEKKTPTSWLDLAASASAAARR
DSLTIAL

Transcript Sequence

Transcript ID

Os03t0181100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4248976:4249816:1 gene:Os03g0181100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 11B description:Tify domain containing protein. (Os03t0181100-01);Tify domain containing protein. (Os03t0181100-02)
Sequence

ACGACTCAAAACCACCAAAACTCACCAAGCAAAGCACCAGCGAGGAAGAACAAGAAGGAA
GGTGAAGAGAAGCCGCGTTTTGTTTCTCGCGAAAGTGTTTGTTGATATGGCGATGGAGGG
GAAGAGCAGGAGGTTCGCGGTGGCGTGCGGGGTGCTCAGCCAGTACGTGAGGGCGGAGCA
GAAGATGGCGGCGGCGGCGGGGGCGGCACCGGCGAGGGCGGTGACGACGCTGAGCCTGAT
GCCTGGGGCGGAGGTGGTCGTCGAGGAGGAGGAGCGGAGGGAGGTTGGGGAGGAGGAGGC
GGGGCCAGCGACGGCGCCGGCCGCGCCGCTGACCATCTTCTACGGTGGGAGGATGGTCGT
CTTCGAGGACTTCCCCGCGGACAAGGCGGCGGAGGTGATGCGCATGGCCTCCTCCGGGAT
GGCGGCGGCGCCGGCTCAGCGGGAGGGCGCCGCGCTCGCGGACATGCCCATCATGAGGAA
GGCGTCGCTGCAGCGGTTCTTCGCCAAGCGCAAGGACCGCCTCGCGGCGACCACCCCCTA
CGCCCGCCCGTCGCCGGCGGAGACCAAGGCCTCCGAGCCGGAGGAGAAGAAGACGCCCAC
CTCATGGCTGGACCTCGCCGCCTCCGCCTCCGCCGCCGCGCGCCGTGACAGCCTCACCAT
CGCGCTGTGATCTGCGCGGCTTTGACCAAAAACGACTTAAGACGCGCGCGCGCTCTCAGC
GCGCAAGAGGATTGATTCACTTTGCTCATACCCATGGCGACGTAGAGTTTTTACCGCTTT
TGCTATACTTCTTTGTAAAATTCGATAGGGAGATTGAATTGATGGGAAACCCCTTGTGCC
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