Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0180900-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4236724:4238058:1 gene:Os03g0180900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 11C description:Tify domain containing protein. (Os03t0180900-01)
Sequence

ATGGCCGGTAGTAGCGAGCAGCAGCTGGTCGCCAACGCGGCGGCGACGACGGTGGCCGGG
AACGGGAGCAGGTTCGCGGTGACGTGTGGCTTGCTCAGGCAGTACATGAAGGAGCACAGT
GGAAGCAACGGCGGCGGTGGCTTCTTGCCGGCGGTGACGGCCATGAGCCTCATGACCGGC
GGCGCTGATGCGGAGGAGGAGGCGCCGGAGGTGAGGAAGACCATGGAGCTCTTCCCTCAG
CAGGCTGGGACGCTGAAAGACACGCAAGAAAGGAAGGAGATCACCGAGAAGGCGCAGCTG
ACCATCTTCTACGGCGGGAGCGTGGTGGTGTTCGACGATTTCCCCGCCGAGAAGGCCGGC
GAGCTGATGAAACTCGCCGGCTCCCGCGACAGCACGGCGGCGGCGGCCGTCTCAGACGCC
GGCGCCGCAGCGGGGCAGCCTTGCCTACCAGACATGCCCATCGCGAGGAAGGTGTCGCTG
CAGAGGTTCCTGGAGAAGAGGAAGAACAGGATCGTCGTGGCGGAGCCACTGCCGGAGTCG
GAGAAGAAGGAGGCGGAGTCGAGCAAGCGTGCCAAGAAAGACGATGGCGGCGCGTCGTGG
CTCCAGGTGAACCCCACTCTCAGCCTGTGA

Peptide Sequence

PEP ID

Os03t0180900-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4236724:4238058:1 gene:Os03g0180900 transcript:Os03t0180900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 11C description:Tify domain containing protein. (Os03t0180900-01)
Sequence

MAGSSEQQLVANAAATTVAGNGSRFAVTCGLLRQYMKEHSGSNGGGGFLPAVTAMSLMTG
GADAEEEAPEVRKTMELFPQQAGTLKDTQERKEITEKAQLTIFYGGSVVVFDDFPAEKAG
ELMKLAGSRDSTAAAAVSDAGAAAGQPCLPDMPIARKVSLQRFLEKRKNRIVVAEPLPES
EKKEAESSKRAKKDDGGASWLQVNPTLSL

Transcript Sequence

Transcript ID

Os03t0180900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4236724:4238058:1 gene:Os03g0180900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 11C description:Tify domain containing protein. (Os03t0180900-01)
Sequence

ACGGGAAGGTTTCGTCCTCGTTTCGTTTCTTGCAGCAGGAAGCCAAAGTGTATTTCCCGA
GCTTTGATGTGAGCTAGCTGATTTTGCTAGAGCTACAACATGGCCGGTAGTAGCGAGCAG
CAGCTGGTCGCCAACGCGGCGGCGACGACGGTGGCCGGGAACGGGAGCAGGTTCGCGGTG
ACGTGTGGCTTGCTCAGGCAGTACATGAAGGAGCACAGTGGAAGCAACGGCGGCGGTGGC
TTCTTGCCGGCGGTGACGGCCATGAGCCTCATGACCGGCGGCGCTGATGCGGAGGAGGAG
GCGCCGGAGGTGAGGAAGACCATGGAGCTCTTCCCTCAGCAGGCTGGGACGCTGAAAGAC
ACGCAAGAAAGGAAGGAGATCACCGAGAAGGCGCAGCTGACCATCTTCTACGGCGGGAGC
GTGGTGGTGTTCGACGATTTCCCCGCCGAGAAGGCCGGCGAGCTGATGAAACTCGCCGGC
TCCCGCGACAGCACGGCGGCGGCGGCCGTCTCAGACGCCGGCGCCGCAGCGGGGCAGCCT
TGCCTACCAGACATGCCCATCGCGAGGAAGGTGTCGCTGCAGAGGTTCCTGGAGAAGAGG
AAGAACAGGATCGTCGTGGCGGAGCCACTGCCGGAGTCGGAGAAGAAGGAGGCGGAGTCG
AGCAAGCGTGCCAAGAAAGACGATGGCGGCGCGTCGTGGCTCCAGGTGAACCCCACTCTC
AGCCTGTGAGCCGAAGAAACTGAAGATAGCTGGATCAAACAAGGAAAAATTAATTACTAC
TACTAGTAGTACTGTATTGATTTACCATTTGATTTCCACGTGTCTGTGGAAAGTGTGGAA
CCGTGTATTATTGATCGTTTTTCCCCATTTCTTACTATTTTGCAACAGTTGTTGGTTTCT
TCCGGGGGAATTAGTAGCTAGGTAGCAGCTATGATTGGTTAAATTAATCTGTCAGCTTAT
CTGTTTGTTTGAGAATTCTTTGATTATTTGAAGAATTCTTTCATGCATGCTGATCTTATA
TGTAAGGATCCATGCACACGGATTGATGCCTGTCGGACCTATGGCTTGTAAATCCAAATA
AAATGGTCAACAAATGGTATTATCCTCTTC