Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0180600-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4222085:4223728:1 gene:Os03g0180600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0180600-01)
Sequence

CACTGTAGTAGTCAGAGAGAAATTCTTCATTCTCCAATCCTGCATACGCATGCTTCTGTA
AAGTTGCAACAAGATCAGAGTTTACCCCTATATATAGTGAACTTGGAGTCTTGGATCATC
ATCCATCTTCTTCTTCCCATTGAGTCCATTCATCCACATTTTTCTTCTGAACTCGCACAC
AAGAGGTCACGAGAACTGCTCATGAGGGCTCTGAACTGGGTGCAGACAAGGCTCCACGGG
ACGAGGAAACAAGATCACACTGCAGTGTCATCTCGACGCGCTCATACCTCCGGTGATCTC
CACCGGAACGGCGACGAGCTCGACGACGGCTGGGCGGCGGCGATGCTGTCCATAGGCACG
TTAGGGGGACCGAAGGGCCGTCATGGTTCTGGCACGCCGTGGACGACGGCGGCGGCGGGC
GCCGACGAGCTCGACAGGCTGCAGGAGGAGCTCAGGCTGCTGGTTCGAGCTCAGGCGGTG
GTGACCGGAGGCGAGGACGACGACGGCGGCGGCGGCGGCGGCAGGCAACGCAGGTCACTG
AGCCGCACGTCGAGCTCCACGAATGGCAGAGAGGTGGTGGCCAAGCTGAAGCAGAGATCG
ATCAGGAAGATCATGGCCGCTGCTCTCGGTGGCCTCCTGCACCGGCCGAGCTGCAGGGAG
ACGATGCCTGAAGCGACTGTCAGTGAGATTATATGGTCATTGTTGCACAAGAACACGCAT
CCTGAAAAACCGGCGTTGCCACATACTGTGATGAAAGGTGATCCAACGGTTCCGACGCCA
CAGAAGGATAAACAAGAGGGCACCAAATGGATCAGAACAGATTCAGAGTACATTGTGTTG
GATCTGGAGATATAG

Peptide Sequence

PEP ID

Os03t0180600-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4222085:4223728:1 gene:Os03g0180600 transcript:Os03t0180600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0180600-01)
Sequence

HCSSQREILHSPILHTHASVKLQQDQSLPLYIVNLESWIIIHLLLPIESIHPHFSSELAH
KRSRELLMRALNWVQTRLHGTRKQDHTAVSSRRAHTSGDLHRNGDELDDGWAAAMLSIGT
LGGPKGRHGSGTPWTTAAAGADELDRLQEELRLLVRAQAVVTGGEDDDGGGGGGRQRRSL
SRTSSSTNGREVVAKLKQRSIRKIMAAALGGLLHRPSCRETMPEATVSEIIWSLLHKNTH
PEKPALPHTVMKGDPTVPTPQKDKQEGTKWIRTDSEYIVLDLEI

Transcript Sequence

Transcript ID

Os03t0180600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4222085:4223728:1 gene:Os03g0180600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0180600-01)
Sequence

AGTGGCCATGAGCCTATCCTAAGATAAGATATCAACCAAATCTCCTGAGTAATTTGGTCA
CATGGAATATCTGTTCATCTCTCCTCAACTAGGCCAGATCCCTATTTGGAATGTTAAGGA
GTACCAAGCTGCCATTCATCTTTGAGCTCTGCATTTCTGCCATAATTCCTGTGAGATGTG
ACAGTAATCACCTTGACACTGTAGTAGTCAGAGAGAAATTCTTCATTCTCCAATCCTGCA
TACGCATGCTTCTGTAAAGTTGCAACAAGATCAGAGTTTACCCCTATATATAGTGAACTT
GGAGTCTTGGATCATCATCCATCTTCTTCTTCCCATTGAGTCCATTCATCCACATTTTTC
TTCTGAACTCGCACACAAGAGGTCACGAGAACTGCTCATGAGGGCTCTGAACTGGGTGCA
GACAAGGCTCCACGGGACGAGGAAACAAGATCACACTGCAGTGTCATCTCGACGCGCTCA
TACCTCCGGTGATCTCCACCGGAACGGCGACGAGCTCGACGACGGCTGGGCGGCGGCGAT
GCTGTCCATAGGCACGTTAGGGGGACCGAAGGGCCGTCATGGTTCTGGCACGCCGTGGAC
GACGGCGGCGGCGGGCGCCGACGAGCTCGACAGGCTGCAGGAGGAGCTCAGGCTGCTGGT
TCGAGCTCAGGCGGTGGTGACCGGAGGCGAGGACGACGACGGCGGCGGCGGCGGCGGCAG
GCAACGCAGGTCACTGAGCCGCACGTCGAGCTCCACGAATGGCAGAGAGGTGGTGGCCAA
GCTGAAGCAGAGATCGATCAGGAAGATCATGGCCGCTGCTCTCGGTGGCCTCCTGCACCG
GCCGAGCTGCAGGGAGACGATGCCTGAAGCGACTGTCAGTGAGATTATATGGTCATTGTT
GCACAAGAACACGCATCCTGAAAAACCGGCGTTGCCACATACTGTGATGAAAGGTGATCC
AACGGTTCCGACGCCACAGAAGGATAAACAAGAGGGCACCAAATGGATCAGAACAGATTC
AGAGTACATTGTGTTGGATCTGGAGATATAGACACCCCCGGTGGCAGTAAAGAGGCAACA
AGAACAATTTCCTGGATTTTTTTTTCTTTTCTTGAGAGAGGAGACTAGCGTTTCTTTTTT
GTACGACCGTACTTCAGTACATGTACATGTCTGTTTACAAAACGTGTTGTCAACTTCTAT
TACAAAAAAGGGTTTCCCTTTTGCTTACC