Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0180400-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:4210533:4212985:-1 gene:Os03g0180400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha1 subunit description:Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1). (Os03t0180400-01)
Sequence	ATGAGCCGCGGCACGGGCGCCGGCTACGACCGCCACATCACCATCTTCTCCCCGGAGGGC CGCCTCTACCAAGTCGAGTACGCGTTCAAGGCGGTGAAGTCGGCGGGGGTGACGTCGATC GGCGTCCGCGGCAAGGACTCCGTCTGCGTCGTCACACAGAAGAAAGTGCCGGACAAGTTG CTGGACCATACGAGCGTCACGCACTTGTTCCCGATCACCAAGTACATCGGTCTGCTCGCC ACTGGCCTCACAGCTGATGCAAGGTCCTTAGTCTACCAAGCAAGGAATGAGGCAGCTGAA TTCCGTTTCAAATGGGGCTACGAGATGCCCGTAGACGTATTAGCAAAATGGATAGCAGAC AAAGCACAAGTCTACACGCAGCATGCCTACATGAGGCCCCTTGGAGTAGTTGCTATGGTC TTGGGCTATGACGAAGAGAAAAACGCTCAACTATTCAAATGTGACCCGGCAGGTCACTTC TTTGGACATAAGGCAACTAGCGCCGGTCTTAAGGAGCAGGAAGCAATAAATTTTCTGGAG AAGAAAATGAAGGATGACCCACAGTTCTCCTACGAGGAAACTGTCCAGATTGCAATTTCT GCATTGCAATCAGTTCTTCAGGAAGATTTCAAGGCCACCGAGATTGAGGTCGGTGTTGTG AGGAAAGATGATCGTGTTTTCAGAGCACTCACGACAGAGGAGATCGATCAGCACCTAACA GCCATAAGTGAGCGCGACTGA

Peptide Sequence

PEP ID	Os03t0180400-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:4210533:4212985:-1 gene:Os03g0180400 transcript:Os03t0180400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha1 subunit description:Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1). (Os03t0180400-01)
Sequence	MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL LDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIAD KAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLE KKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLT AISERD

Transcript Sequence

Transcript ID	Os03t0180400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:4210533:4212985:-1 gene:Os03g0180400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha1 subunit description:Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1). (Os03t0180400-01)
Sequence	ATTTTTGGTTTATTTTGCCTCCCCAACCAAGCACAAACACAAGCCTCGCCGTATTCTCTC GGAGCAAAGCGAACGCGAAACCCCACCCGCGGCGGCGAGAAATCCGGCGACGATGAGCCG CGGCACGGGCGCCGGCTACGACCGCCACATCACCATCTTCTCCCCGGAGGGCCGCCTCTA CCAAGTCGAGTACGCGTTCAAGGCGGTGAAGTCGGCGGGGGTGACGTCGATCGGCGTCCG CGGCAAGGACTCCGTCTGCGTCGTCACACAGAAGAAAGTGCCGGACAAGTTGCTGGACCA TACGAGCGTCACGCACTTGTTCCCGATCACCAAGTACATCGGTCTGCTCGCCACTGGCCT CACAGCTGATGCAAGGTCCTTAGTCTACCAAGCAAGGAATGAGGCAGCTGAATTCCGTTT CAAATGGGGCTACGAGATGCCCGTAGACGTATTAGCAAAATGGATAGCAGACAAAGCACA AGTCTACACGCAGCATGCCTACATGAGGCCCCTTGGAGTAGTTGCTATGGTCTTGGGCTA TGACGAAGAGAAAAACGCTCAACTATTCAAATGTGACCCGGCAGGTCACTTCTTTGGACA TAAGGCAACTAGCGCCGGTCTTAAGGAGCAGGAAGCAATAAATTTTCTGGAGAAGAAAAT GAAGGATGACCCACAGTTCTCCTACGAGGAAACTGTCCAGATTGCAATTTCTGCATTGCA ATCAGTTCTTCAGGAAGATTTCAAGGCCACCGAGATTGAGGTCGGTGTTGTGAGGAAAGA TGATCGTGTTTTCAGAGCACTCACGACAGAGGAGATCGATCAGCACCTAACAGCCATAAG TGAGCGCGACTGAGCTACAATGAAGTTGGACATGTTACTGCTTCACACTGCACTCTAGTC TTTCAGCAGTGTCATTTTATTTCATGTTCAGCCAAGAAACATTCAGTGAACCATTTCATG TAACTCCAAAAAACAGTCATCAGCTTTACTTGTTGGATCATCCTCTATCGTTGTGGTTGA ATTTACTACGATTTACTTGTATGCTGC