Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0180000-00
CDS Infomation	cds chromosome:IRGSP-1.0:3:4194372:4196475:-1 gene:Os03g0180000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CATION/CA2+ EXCHANGER 1 description:Sodium/calcium exchanger membrane region domain containing protein. (Os03t0180000-00)
Sequence	ATGATCTCGTCGGCGGGACCGCATCCTCGCCGGATTCGGCCCCTCGCCGCCGCCTCCCTC GTGCTGTTCCTCTTCCTGCTCTACAGCCGCTCCGGCGGGAGCTTGGTGCGGTCTCCACGG GTATTGAGCTTCGATTCGCATACGGGGCACCGTAGATTCCTCTCCGATGCCGATCCTATC AGCCCCGCGTCCAACCTGTCGGAGATCGGGGAGCTAAACGGCGAGCAGCCGCCGGTGGAT CCCTCCGTGGCGTGCGCCGGGGTAGCGCGGCACGAGGGGTTCGGGTCCCAGTGCGAGTTC CTCCGGGCGCACCCGCAGTGTAGCTCCGGCGGGTTCGTCGACTACTTGGGCTTCTTCTAC TGCCGGTGCGAGAGGTTCAGGGTGCTCGGCTATGCGGTGCTCGGTGTGTGCCTAGCGGCT CTGTTCTACATGCTTGGGAACACGGCCGCGGATTACTTCTGCTGCAGCCTTGAGAAGATG TCCGCGCTGCTACGGCTCCCGCCGACCGTGGCCGGAGTGACATTGCTCCCCTTTGGAAAT GGCGCGCCTGATGTGTTTGCGAGTATTGCCGCGTTTATGGGGACCGGCGCTGGTGATGTT GGGCTGAACAGTGTGTTGGGCGGAGCGGTCTTTGTGACTTGTGTTGTTGTCGGAGCTGTG TCATTGTGCGTGGCGGAGAAGAATGTGCAGATTGATAGAAGATGCTTTGTGAGGGATGTT GGGTTCTTTCTGATGACTCTAGTAGCACTGTCGATTATTTTGATTGTTGGGAAGGTGACC GTTTGGGGAGCGATTATGTTTGTGTCGATTTATGTGGTTTATGCGTTTGTGGTGGCTGCA AATGAGGTATTGAGGAAGCATGCACGGAGGCTTAAGTTTGATGTGGTCACACCACTGCTG CCTGTGAGAGGGAGTATCTTTGCACAAGGAACAGAAGATGATGAGTCCGTGTACAGTTCA CTTCTTGAGGAGGAATCAGATGGTGACGTGGCTCAAATAAACACATCCTTGCCTCAGTGG ATGTGGGCTTCTCATGTGGCCATTTACTCAAATCATGGGATCAGAGGTGGTTCACCTGAC AGTTCCAGGCCGCTATGGGGTTGGAGTGATGAAGAAGTGGATAATTCCACAGTTAGCTTC TCCAAGCTGTTCTTGTTTTTGGAGCTCCCCTTGACGATACCAAGAAGGTTGACAATTCCA ATAGTTGAGGAAGACCGGTGGTCGAAAGAATATGCTGTTGCTAGTGCTGGCTTGGCGCCT GTTCTGCTGGCATTTCTTTGGAGCAGTCAAGATGGGGTATCCACTAAGGCTCACATAGCA GCATATGTGATAGCTGGTATTTCTGGGATGGCACTTGCTTCTCTCGCTTTCATGTTCACT GACCATGAACGACCTCCACGGAGATTTTTATTCCCATGGGTGTTGGGAGGGTTTGTGATG AGCATTATCTGGTTCTACATCATTGCCAATGAACTGGTTGCACTTTTAGTTGCTTTTGGA GTGATATTGGGGATCAATCCTTCAATTCTTGGGTTAACTGTGTTAGCATGGGGTAATTCG ATGGGTGACTTAATGTCAAATGTTGCCTTGGCAATGAATGGAGGAGATGGTGTGCAGATC GCCATGTCTGGATGCTACGCAGGACCTATGTTCAATACACTTGCTGGATTGGGAATATCG ATGCTGCTTGGAGCTTGGTCAACAGCACCAAACTCTTATGTTCTTCCTCAAGACAGCTCT CTCATTTACACAATGAGCTTCCTCGTTGGTGGATTGATCTGGGCTCTTGTTATGCTGCCA CGGGGTGGCATGCAGCCTAACAAGATACTTGGAGTTGGTCTCATTGCCCTTTACTCAGTT TTTCTTTTTATTAGGGTAAGCAATGCAATGGGGATATTGCCATTGCCTGGCTTGAGTTAG

Peptide Sequence

PEP ID	Os03t0180000-00
PEP Infomation	pep chromosome:IRGSP-1.0:3:4194372:4196475:-1 gene:Os03g0180000 transcript:Os03t0180000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CATION/CA2+ EXCHANGER 1 description:Sodium/calcium exchanger membrane region domain containing protein. (Os03t0180000-00)
Sequence	MISSAGPHPRRIRPLAAASLVLFLFLLYSRSGGSLVRSPRVLSFDSHTGHRRFLSDADPI SPASNLSEIGELNGEQPPVDPSVACAGVARHEGFGSQCEFLRAHPQCSSGGFVDYLGFFY CRCERFRVLGYAVLGVCLAALFYMLGNTAADYFCCSLEKMSALLRLPPTVAGVTLLPFGN GAPDVFASIAAFMGTGAGDVGLNSVLGGAVFVTCVVVGAVSLCVAEKNVQIDRRCFVRDV GFFLMTLVALSIILIVGKVTVWGAIMFVSIYVVYAFVVAANEVLRKHARRLKFDVVTPLL PVRGSIFAQGTEDDESVYSSLLEEESDGDVAQINTSLPQWMWASHVAIYSNHGIRGGSPD SSRPLWGWSDEEVDNSTVSFSKLFLFLELPLTIPRRLTIPIVEEDRWSKEYAVASAGLAP VLLAFLWSSQDGVSTKAHIAAYVIAGISGMALASLAFMFTDHERPPRRFLFPWVLGGFVM SIIWFYIIANELVALLVAFGVILGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGVQI AMSGCYAGPMFNTLAGLGISMLLGAWSTAPNSYVLPQDSSLIYTMSFLVGGLIWALVMLP RGGMQPNKILGVGLIALYSVFLFIRVSNAMGILPLPGLS

Transcript Sequence

Transcript ID	Os03t0180000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:4194372:4196475:-1 gene:Os03g0180000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CATION/CA2+ EXCHANGER 1 description:Sodium/calcium exchanger membrane region domain containing protein. (Os03t0180000-00)
Sequence	CGTCTCGCAATTCCCAAACCGCACCTTCCAATCCTCCGAGCAGGCAAACCCTAACCCCGA CGACCCGCGCCCCACGAAACCCCTCCCCTCCGCCCGAATCACTCGCTGCCACCCCCAAAT TCGGCATGCCCGTCCCCGGAAACCCTAGGCACTGACCTCGCCGGAGATGATCTCGTCGGC GGGACCGCATCCTCGCCGGATTCGGCCCCTCGCCGCCGCCTCCCTCGTGCTGTTCCTCTT CCTGCTCTACAGCCGCTCCGGCGGGAGCTTGGTGCGGTCTCCACGGGTATTGAGCTTCGA TTCGCATACGGGGCACCGTAGATTCCTCTCCGATGCCGATCCTATCAGCCCCGCGTCCAA CCTGTCGGAGATCGGGGAGCTAAACGGCGAGCAGCCGCCGGTGGATCCCTCCGTGGCGTG CGCCGGGGTAGCGCGGCACGAGGGGTTCGGGTCCCAGTGCGAGTTCCTCCGGGCGCACCC GCAGTGTAGCTCCGGCGGGTTCGTCGACTACTTGGGCTTCTTCTACTGCCGGTGCGAGAG GTTCAGGGTGCTCGGCTATGCGGTGCTCGGTGTGTGCCTAGCGGCTCTGTTCTACATGCT TGGGAACACGGCCGCGGATTACTTCTGCTGCAGCCTTGAGAAGATGTCCGCGCTGCTACG GCTCCCGCCGACCGTGGCCGGAGTGACATTGCTCCCCTTTGGAAATGGCGCGCCTGATGT GTTTGCGAGTATTGCCGCGTTTATGGGGACCGGCGCTGGTGATGTTGGGCTGAACAGTGT GTTGGGCGGAGCGGTCTTTGTGACTTGTGTTGTTGTCGGAGCTGTGTCATTGTGCGTGGC GGAGAAGAATGTGCAGATTGATAGAAGATGCTTTGTGAGGGATGTTGGGTTCTTTCTGAT GACTCTAGTAGCACTGTCGATTATTTTGATTGTTGGGAAGGTGACCGTTTGGGGAGCGAT TATGTTTGTGTCGATTTATGTGGTTTATGCGTTTGTGGTGGCTGCAAATGAGGTATTGAG GAAGCATGCACGGAGGCTTAAGTTTGATGTGGTCACACCACTGCTGCCTGTGAGAGGGAG TATCTTTGCACAAGGAACAGAAGATGATGAGTCCGTGTACAGTTCACTTCTTGAGGAGGA ATCAGATGGTGACGTGGCTCAAATAAACACATCCTTGCCTCAGTGGATGTGGGCTTCTCA TGTGGCCATTTACTCAAATCATGGGATCAGAGGTGGTTCACCTGACAGTTCCAGGCCGCT ATGGGGTTGGAGTGATGAAGAAGTGGATAATTCCACAGTTAGCTTCTCCAAGCTGTTCTT GTTTTTGGAGCTCCCCTTGACGATACCAAGAAGGTTGACAATTCCAATAGTTGAGGAAGA CCGGTGGTCGAAAGAATATGCTGTTGCTAGTGCTGGCTTGGCGCCTGTTCTGCTGGCATT TCTTTGGAGCAGTCAAGATGGGGTATCCACTAAGGCTCACATAGCAGCATATGTGATAGC TGGTATTTCTGGGATGGCACTTGCTTCTCTCGCTTTCATGTTCACTGACCATGAACGACC TCCACGGAGATTTTTATTCCCATGGGTGTTGGGAGGGTTTGTGATGAGCATTATCTGGTT CTACATCATTGCCAATGAACTGGTTGCACTTTTAGTTGCTTTTGGAGTGATATTGGGGAT CAATCCTTCAATTCTTGGGTTAACTGTGTTAGCATGGGGTAATTCGATGGGTGACTTAAT GTCAAATGTTGCCTTGGCAATGAATGGAGGAGATGGTGTGCAGATCGCCATGTCTGGATG CTACGCAGGACCTATGTTCAATACACTTGCTGGATTGGGAATATCGATGCTGCTTGGAGC TTGGTCAACAGCACCAAACTCTTATGTTCTTCCTCAAGACAGCTCTCTCATTTACACAAT GAGCTTCCTCGTTGGTGGATTGATCTGGGCTCTTGTTATGCTGCCACGGGGTGGCATGCA GCCTAACAAGATACTTGGAGTTGGTCTCATTGCCCTTTACTCAGTTTTTCTTTTTATTAG GGTAAGCAATGCAATGGGGATATTGCCATTGCCTGGCTTGAGTTAGTTGCATAATCCTGT TGTA