Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0179900-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:4187158:4193200:1 gene:Os03g0179900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 2 description:Similar to Avr9/Cf-9 rapidly elicited protein 44 (Fragment). (Os03t0179900-01);Similar to Lipoxygenase. (Os03t0179900-02)
Sequence	ATGGAGTTGACCGGCCTGACGCGGGCGGCGGCGGCGGCCACCGTGACGCCGCCGGCGCCG CGCCGGGGATGGGGCGAGCTCCGGTTCGCGCCGCTGCTGCCCGGCGAGCGGCATGGGAGG AGGAAGGTGGTGGTGGCGGCCATCAGCGAGGAGGTGCCGCGGCTGGCGGCGTCGCCGTCG TCGGGGATCAAGGGCGGCGGGGCCGGGGAGAGGCGGCCGGCGCCGGAGAAGGTGGCGCTG CGGGCGGCGCTGACGGTGCGGCGGAAGCAGAAGGAGGACATCAAGGAGGCGGTGGCCGGA CACCTCGACGCGCTCTGGGACATGGTCGGCCGGAATGTCGTGCTCGAGCTCATCAGCACC AAGATCCACCCAAGGACCAAGAAGCCGATGCAGAGTGGCCGTGTGTCCATCAAGGACTGG TGCCAGAAGAGGGGAGCCAAGGGCGACCACGTCGTGTACACGGCCGAGTTCACGGTGGAC GCCGACTTCGGCGAGCCGGGCGCCATCGCCGTGGCCAACCGGCACAACAGGGAGTTCTTC CTGGAGAGCATCGTCGTCGAGGGCGGCGGCCTGCCGTGCGGGCCTGTGCACTTCGCCTGC AACTCCTGGGTGCAGTCCACCAGAGAGCTGCCAACAAAGAGGGTGTTCTTCAGCAACAAG CCATATTTACCTTCTGAAACACCTCCCGGGCTTAGAGAACTAAGGGAGAAGGAACTTAAA GACCTAAGAGGAGATGGCACAGGTGTTCGGAAATTATCTGACAGAATATATGATTATGCC ACATACAATGATTTGGGAAATCCAGATAAGGGGAAGGAATTCATCAGGCCGATCCTTGGA GGAGAGAAGATACCTTACCCACGGCGTTGCCGGACTGGTCGCCCGCCAACGGATACCAAC ATGCTAGCAGAGAGCAGAGTAGAGAAGCCGCATCCAATATATGTTCCCCGCGATGAGGCA TTTGAGGAGCTGAAGCAGGGTGCCTTCTCATCAGGGAGGCTCCGGGCAGTACTTCACACA TTGATCCCATCGCTGATTGCATCCATCTCAGCTGAGACCCACAATTTCCAAGGCTTCCAC CACATCGACAACCTCTATAAGGAGGGCCTCAGGCTGAAGCTGGGCCTGCAAGAACACCTA TTCCAGAAGATACCACTTGTTCAGAAGATTCAAGAGTCGAGCGAAGGGATGCTTCGTTAC GACACTCCTAGCATTCTTTCTAAGGACAAGTTTGCATGGCTCCGTGACGATGAGTTTGCT AGGCAGGCTGTTGCAGGAATAAACCCAGTTAACATTGAGCGGCTGCAGGTTTTCCCACCA GTGAGCAAGCTGGATCCTGCAATCTATGGACCACCAGAATCATCAATTACTGAAACACAC ATAGCTGGACATCTCAACGGACTCACAGTACAACAGGCAATGGACGAAGCAAAGCTGTTC ATAGTGGACTACCATGACGCATACCTGCCATTCTTGGACCGGATCAATGCGATAGATGGA CGGAAAGCATATGCGACCCGAACAATCTTCTTCCTGACAGAAGCTGGCACACTGAAACCG ATCGCTATCGAGCTTAGTCTTCCTCCAGCCAAGCCAGGGGAGCCTCGGCCAAGCAAGGTC CTGACGCCTCCCTATGATGCTACCTCGAATTGGCTCTGGATGCTTGCCAAGGCCCATGTC AGCTCCAACGATGCTGGTGTCCATCAGCTGGTCAATCACTGGCTTAGGACGCATGCAACA ATGGAGCCGTTCATCCTGGCGGCGCACCGGCATATGAGCGCAATGCACCCCATCTTCAAG CTCCTGCACCCGCACATGCGGTACACGCTCGAGATCAACGCGCTTGCACGGCAGAGCCTC ATCAACGCCGACGGAGTGATCGAGTCCTGCTTCACCCCCGGCCCTGTCTCCGGCGAGATC AGCGCTGCTTACTACCGTAACCACTGGCGGTTCGACCTGGAGGGCCTCCCTTCCGACCTC ATCCGCAGGGGAGTTGCTGTGGAGGACGCGACGCAGCCCCATGGCGTCAGGCTTCTCATC GAGGACTACCCATACGCGAATGATGGGCTCCTGCTCTGGTCGGCAATTCGAAGCTGGGTG GAGTCCTACGTGCAGCTCTACTACCCGGACGCCGGGACGGTGCAGTGCGATCTTGAGCTG CAGGGGTGGTACCACGAGTCGATCCATGTCGGGCACGGCGACCTCCGGCACGCGCCGTGG TGGCCGCCGCTCTCCACGCCGGTGGACCTGGCGTCCATCCTGACGACGCTGGTCTGGCTC GCGTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTGGGCGGGTACGTCCCG AACCGGCCGCCGCTGATACGGCGGCTGCTGCCGGACCTGGAGCGCGACGCGGCGGAGTAC GCCGCGTTCCTCGCCGACCCGCACCGCTTCTTCCTGAACGCGATGCCCGGGGTGCTGGAG GCGACCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCACTCGCCCGACGAGGAGTAC CTCGGCGAGGGGCGGGACGAGGGCGGCGTGCCGTGGACGGCGGACGAGGCGGCCGTGGCG GCGCACGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCGAGAGGCGGAAC GCCGACCACGGCCGGAAGAACCGGTGCGGCGCCGGGGTGCTGCCGTACGAACTGCTGGCG CCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAACAGCATCTCCATCTGA

Peptide Sequence

PEP ID	Os03t0179900-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:4187158:4193200:1 gene:Os03g0179900 transcript:Os03t0179900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 2 description:Similar to Avr9/Cf-9 rapidly elicited protein 44 (Fragment). (Os03t0179900-01);Similar to Lipoxygenase. (Os03t0179900-02)
Sequence	MELTGLTRAAAAATVTPPAPRRGWGELRFAPLLPGERHGRRKVVVAAISEEVPRLAASPS SGIKGGGAGERRPAPEKVALRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELIST KIHPRTKKPMQSGRVSIKDWCQKRGAKGDHVVYTAEFTVDADFGEPGAIAVANRHNREFF LESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGLRELREKELK DLRGDGTGVRKLSDRIYDYATYNDLGNPDKGKEFIRPILGGEKIPYPRRCRTGRPPTDTN MLAESRVEKPHPIYVPRDEAFEELKQGAFSSGRLRAVLHTLIPSLIASISAETHNFQGFH HIDNLYKEGLRLKLGLQEHLFQKIPLVQKIQESSEGMLRYDTPSILSKDKFAWLRDDEFA RQAVAGINPVNIERLQVFPPVSKLDPAIYGPPESSITETHIAGHLNGLTVQQAMDEAKLF IVDYHDAYLPFLDRINAIDGRKAYATRTIFFLTEAGTLKPIAIELSLPPAKPGEPRPSKV LTPPYDATSNWLWMLAKAHVSSNDAGVHQLVNHWLRTHATMEPFILAAHRHMSAMHPIFK LLHPHMRYTLEINALARQSLINADGVIESCFTPGPVSGEISAAYYRNHWRFDLEGLPSDL IRRGVAVEDATQPHGVRLLIEDYPYANDGLLLWSAIRSWVESYVQLYYPDAGTVQCDLEL QGWYHESIHVGHGDLRHAPWWPPLSTPVDLASILTTLVWLASAQHAALNFGQYPLGGYVP NRPPLIRRLLPDLERDAAEYAAFLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEY LGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLA PSSPPGVTCRGVPNSISI

Transcript Sequence

Transcript ID	Os03t0179900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:4187158:4193200:1 gene:Os03g0179900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 2 description:Similar to Avr9/Cf-9 rapidly elicited protein 44 (Fragment). (Os03t0179900-01);Similar to Lipoxygenase. (Os03t0179900-02)
Sequence	ACAAGACGCGACACCTCCCCTGAATGAATGAATGAATCCTACTAGGCCAGCACTGCTGCT GCCTGCTGCTCCCAACTCGACGACGCCAACCACCTCGCCTCGCTTAGCTCCCACCTAAAC AGTAAGAGCACACAGCCCAAACCGGCGGGAGATCCGAAGCGCAGCCAAGAACGCATCACT GTCCTCTTCGTCTTCGTGCATGGAGTTGACCGGCCTGACGCGGGCGGCGGCGGCGGCCAC CGTGACGCCGCCGGCGCCGCGCCGGGGATGGGGCGAGCTCCGGTTCGCGCCGCTGCTGCC CGGCGAGCGGCATGGGAGGAGGAAGGTGGTGGTGGCGGCCATCAGCGAGGAGGTGCCGCG GCTGGCGGCGTCGCCGTCGTCGGGGATCAAGGGCGGCGGGGCCGGGGAGAGGCGGCCGGC GCCGGAGAAGGTGGCGCTGCGGGCGGCGCTGACGGTGCGGCGGAAGCAGAAGGAGGACAT CAAGGAGGCGGTGGCCGGACACCTCGACGCGCTCTGGGACATGGTCGGCCGGAATGTCGT GCTCGAGCTCATCAGCACCAAGATCCACCCAAGGACCAAGAAGCCGATGCAGAGTGGCCG TGTGTCCATCAAGGACTGGTGCCAGAAGAGGGGAGCCAAGGGCGACCACGTCGTGTACAC GGCCGAGTTCACGGTGGACGCCGACTTCGGCGAGCCGGGCGCCATCGCCGTGGCCAACCG GCACAACAGGGAGTTCTTCCTGGAGAGCATCGTCGTCGAGGGCGGCGGCCTGCCGTGCGG GCCTGTGCACTTCGCCTGCAACTCCTGGGTGCAGTCCACCAGAGAGCTGCCAACAAAGAG GGTGTTCTTCAGCAACAAGCCATATTTACCTTCTGAAACACCTCCCGGGCTTAGAGAACT AAGGGAGAAGGAACTTAAAGACCTAAGAGGAGATGGCACAGGTGTTCGGAAATTATCTGA CAGAATATATGATTATGCCACATACAATGATTTGGGAAATCCAGATAAGGGGAAGGAATT CATCAGGCCGATCCTTGGAGGAGAGAAGATACCTTACCCACGGCGTTGCCGGACTGGTCG CCCGCCAACGGATACCAACATGCTAGCAGAGAGCAGAGTAGAGAAGCCGCATCCAATATA TGTTCCCCGCGATGAGGCATTTGAGGAGCTGAAGCAGGGTGCCTTCTCATCAGGGAGGCT CCGGGCAGTACTTCACACATTGATCCCATCGCTGATTGCATCCATCTCAGCTGAGACCCA CAATTTCCAAGGCTTCCACCACATCGACAACCTCTATAAGGAGGGCCTCAGGCTGAAGCT GGGCCTGCAAGAACACCTATTCCAGAAGATACCACTTGTTCAGAAGATTCAAGAGTCGAG CGAAGGGATGCTTCGTTACGACACTCCTAGCATTCTTTCTAAGGACAAGTTTGCATGGCT CCGTGACGATGAGTTTGCTAGGCAGGCTGTTGCAGGAATAAACCCAGTTAACATTGAGCG GCTGCAGGTTTTCCCACCAGTGAGCAAGCTGGATCCTGCAATCTATGGACCACCAGAATC ATCAATTACTGAAACACACATAGCTGGACATCTCAACGGACTCACAGTACAACAGGCAAT GGACGAAGCAAAGCTGTTCATAGTGGACTACCATGACGCATACCTGCCATTCTTGGACCG GATCAATGCGATAGATGGACGGAAAGCATATGCGACCCGAACAATCTTCTTCCTGACAGA AGCTGGCACACTGAAACCGATCGCTATCGAGCTTAGTCTTCCTCCAGCCAAGCCAGGGGA GCCTCGGCCAAGCAAGGTCCTGACGCCTCCCTATGATGCTACCTCGAATTGGCTCTGGAT GCTTGCCAAGGCCCATGTCAGCTCCAACGATGCTGGTGTCCATCAGCTGGTCAATCACTG GCTTAGGACGCATGCAACAATGGAGCCGTTCATCCTGGCGGCGCACCGGCATATGAGCGC AATGCACCCCATCTTCAAGCTCCTGCACCCGCACATGCGGTACACGCTCGAGATCAACGC GCTTGCACGGCAGAGCCTCATCAACGCCGACGGAGTGATCGAGTCCTGCTTCACCCCCGG CCCTGTCTCCGGCGAGATCAGCGCTGCTTACTACCGTAACCACTGGCGGTTCGACCTGGA GGGCCTCCCTTCCGACCTCATCCGCAGGGGAGTTGCTGTGGAGGACGCGACGCAGCCCCA TGGCGTCAGGCTTCTCATCGAGGACTACCCATACGCGAATGATGGGCTCCTGCTCTGGTC GGCAATTCGAAGCTGGGTGGAGTCCTACGTGCAGCTCTACTACCCGGACGCCGGGACGGT GCAGTGCGATCTTGAGCTGCAGGGGTGGTACCACGAGTCGATCCATGTCGGGCACGGCGA CCTCCGGCACGCGCCGTGGTGGCCGCCGCTCTCCACGCCGGTGGACCTGGCGTCCATCCT GACGACGCTGGTCTGGCTCGCGTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCC GCTGGGCGGGTACGTCCCGAACCGGCCGCCGCTGATACGGCGGCTGCTGCCGGACCTGGA GCGCGACGCGGCGGAGTACGCCGCGTTCCTCGCCGACCCGCACCGCTTCTTCCTGAACGC GATGCCCGGGGTGCTGGAGGCGACCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCA CTCGCCCGACGAGGAGTACCTCGGCGAGGGGCGGGACGAGGGCGGCGTGCCGTGGACGGC GGACGAGGCGGCCGTGGCGGCGCACGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGA GACCATCGAGAGGCGGAACGCCGACCACGGCCGGAAGAACCGGTGCGGCGCCGGGGTGCT GCCGTACGAACTGCTGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAA CAGCATCTCCATCTGATCTGGCGACATTGCCGATCCATTCATTCCTCTTTGTGTTCTGGA TCAATAATTTTAGTAAAATGAATATGAAATAGGAGTATTAATCAGTATCCGTACCCAAAC GAAACC