Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0179000-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:4150750:4157411:1 gene:Os03g0179000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Tubulin-tyrosine ligase family protein, expressed. (Os03t0179000-01)
Sequence	ATGTCGCCGGCCGCCGCCTCACCGGATGATCGCATCCGGAGCTACGAGGATTTCGCGAGG GTGCACGCGTACCTGCTGGCCGCATCCGGGATCCCGCCGTCGCTGCACCAGCGGCTTTAC CGCAAGCTCGCCGACGAGGTGTTCGACGGCGGGGAGGCCTTCTCGGTAGAGCCCTGCGAG GGAGGGAGGCAGCGGAGGCTCGTTCTCGCCGCTGAGTGGACTCTAGGGAGGGAGTCCGAT GTCTTCCTCGTCGACCACGCCTGGTCCTTCCGCCTCTCCGATGCGCTTAAGCAGTTGAGG GAAGTACCAGGACTGGCTGAAAGAATGGCAGCATTGATGTGTGTGGATCTGGACGAGAGA ACTGAACTTGAAGAAGCAGATGAACAGGACAATGGGAATGGAGGGAGTTTGGAGAGTGCC TTGGAGGTAGTTGAGAAAGAAAGGACTAGAATCCAGGAGAAGGGAAGTGACTTTGCAGCA TGGCTGGAACTTGAGGAGCTTGGAATTGATGATGACATGCTAATAGCTTTGGATCTATCT TCAAAATTTCCGAATATGGTAGCCCTCAACCTATGGGGAAACAAGCTTCAGGATCCAGAG AAAATAATGAAAGGAATAGGGGAATGTAGAAGGCTAAAGGCACTTTGGTTGAATGAGAAC CCTGCACTGAAGGAAGGTGTTGACAAAGTTATTCTTGACGGTCTACCTGAATTGGAAATA TACAATTCACATTTTACGAGGAAAGCTGGAGAATGGGCTTTAGGTTTCTGTGGGGATATT ATTGGAGCAGACAATCCCTGTTCCTCAGCGGAAAGCATACCATTGGAGAATATTGCGTCT CTCGATCTCTCAGATAGGTGTATCCACAAACTACCAGTGGTGTTCTCTCCTAGAAAACTT TCCTCCCTGTTGAGCTTGAACATCCGTGGTAATCCTTTGGATCAAATGTCCAGTGACGAT CTCTTGAAGTTAATTAGTGGATTTACCCAGTTACAAGAGTTGGAGGTTGATATTCCTGGC TCTCTTGGAAACAGTGCTATTTCCATTCTTGAGTGTCTTCCTAATCTATCTTTGCTAAAT GGTATCAATGTGGCAAGTATAATAGAGAGTGGTAAGCATATAATTGATTCTGCACTTAAA CCACGTCTGCCTGAATGGTCACCACAAGAATCCCTTCCTGAAAGAGTTATTGGTGCAATG TGGTTATATCTTATGACATACCGGCTTGCTGATGAAGAAAAGATCGATGAAACACCTGTT TGGTATGTCATGGATGAGCTGGGTTCAGCTATGCGCCACAGTGACGATGCAAACTTCAGA ATAGCACCTTTCCTGTTCATGCCCGATGGTAAACTAGCTTCTGCCATAAGTTACACAATT TTGTGGCCTGTTCATGATGTTCATACTGGAGAAGAGTGCACTCGTGATTTCTTGTTTGGT GTTGGCGAGGACAAACAACGCTCGGCTAGGCTTACAGCCTGGTTCCACACACCAGAGAAT TATTTTATCCAGGAATTCAGAAAGTACAAGGAACAACTTCAATCAAGCAGTATCTGTCCT TCAAGAAAAGTAACACCGGTGACCAAAAGTATCCGTCCAAGTGATGGCCATGCACTTCGA GTATTTACCGACATACCCCAAGTAGAGGAGTTTCTAACACGTCCAGAATTTGTTCTCACA TCTGATCCAAAGGAAGCTGACATCATTTGGGTAAGCATGCAAGTGGATTCGGAATTAAAG AATGCACTAGGACTTACAGACCAACAATATACAAATCAATTTCCTTTCGAAGCTTGCCTG GTCATGAAACATCACTTGGCAGAGACTATCCACAAGGCATGGGGTTCACCTGAATGGCTT CAACCTACGTATAACCTGGAGACACATTTATCTCCACTCATTGGAGATTACTGTGTGAGA AAGAGAGATGGTATGGATAACTTATGGATTATGAAGCCTTGGAATATGGCAAGAACAATT GACACTACTGTTACTGGTGATTTATCTGCTATCATTAGACTCATGGAGACAGGTCCCAAA ATATGCCAAAAATATATCGAATGCCCTGCACTTTTCCAAGGAAGGAAGTTTGATCTGCGG TATATTGTTTTCGTCCGCAGTATATGCCCTTTAGAGATATTTCTTTCTGATGTGTTTTGG GTTAGGTTAGCAAACAATCAGTACACTCTGGAGAAAACAAGCTTTTTTGAATATGAAACC CATTTCACCGTGATGAATTATATTGGAAGGATGAACCATATGAACACACCAGAGTTTGTC AAGGAGTTTGAGAAGGAGCACCAAGGTCAGCTTGCATTTTTCTCTTTATATTATGCGTGT CTAGTTACTGACTTCTGA

Peptide Sequence

PEP ID	Os03t0179000-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:4150750:4157411:1 gene:Os03g0179000 transcript:Os03t0179000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Tubulin-tyrosine ligase family protein, expressed. (Os03t0179000-01)
Sequence	MSPAAASPDDRIRSYEDFARVHAYLLAASGIPPSLHQRLYRKLADEVFDGGEAFSVEPCE GGRQRRLVLAAEWTLGRESDVFLVDHAWSFRLSDALKQLREVPGLAERMAALMCVDLDER TELEEADEQDNGNGGSLESALEVVEKERTRIQEKGSDFAAWLELEELGIDDDMLIALDLS SKFPNMVALNLWGNKLQDPEKIMKGIGECRRLKALWLNENPALKEGVDKVILDGLPELEI YNSHFTRKAGEWALGFCGDIIGADNPCSSAESIPLENIASLDLSDRCIHKLPVVFSPRKL SSLLSLNIRGNPLDQMSSDDLLKLISGFTQLQELEVDIPGSLGNSAISILECLPNLSLLN GINVASIIESGKHIIDSALKPRLPEWSPQESLPERVIGAMWLYLMTYRLADEEKIDETPV WYVMDELGSAMRHSDDANFRIAPFLFMPDGKLASAISYTILWPVHDVHTGEECTRDFLFG VGEDKQRSARLTAWFHTPENYFIQEFRKYKEQLQSSSICPSRKVTPVTKSIRPSDGHALR VFTDIPQVEEFLTRPEFVLTSDPKEADIIWVSMQVDSELKNALGLTDQQYTNQFPFEACL VMKHHLAETIHKAWGSPEWLQPTYNLETHLSPLIGDYCVRKRDGMDNLWIMKPWNMARTI DTTVTGDLSAIIRLMETGPKICQKYIECPALFQGRKFDLRYIVFVRSICPLEIFLSDVFW VRLANNQYTLEKTSFFEYETHFTVMNYIGRMNHMNTPEFVKEFEKEHQGQLAFFSLYYAC LVTDF

Transcript Sequence

Transcript ID	Os03t0179000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:4150750:4157411:1 gene:Os03g0179000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Tubulin-tyrosine ligase family protein, expressed. (Os03t0179000-01)
Sequence	TTTCACCAGTCGCTAGCTCAAGCCTCTAAACCCTTCTTCTCCCCAGCTCACCCCGTTCGC CGCCGCCGACGCCGCTCGCCGGGGGCTATCGCCATGTCGCCGGCCGCCGCCTCACCGGAT GATCGCATCCGGAGCTACGAGGATTTCGCGAGGGTGCACGCGTACCTGCTGGCCGCATCC GGGATCCCGCCGTCGCTGCACCAGCGGCTTTACCGCAAGCTCGCCGACGAGGTGTTCGAC GGCGGGGAGGCCTTCTCGGTAGAGCCCTGCGAGGGAGGGAGGCAGCGGAGGCTCGTTCTC GCCGCTGAGTGGACTCTAGGGAGGGAGTCCGATGTCTTCCTCGTCGACCACGCCTGGTCC TTCCGCCTCTCCGATGCGCTTAAGCAGTTGAGGGAAGTACCAGGACTGGCTGAAAGAATG GCAGCATTGATGTGTGTGGATCTGGACGAGAGAACTGAACTTGAAGAAGCAGATGAACAG GACAATGGGAATGGAGGGAGTTTGGAGAGTGCCTTGGAGGTAGTTGAGAAAGAAAGGACT AGAATCCAGGAGAAGGGAAGTGACTTTGCAGCATGGCTGGAACTTGAGGAGCTTGGAATT GATGATGACATGCTAATAGCTTTGGATCTATCTTCAAAATTTCCGAATATGGTAGCCCTC AACCTATGGGGAAACAAGCTTCAGGATCCAGAGAAAATAATGAAAGGAATAGGGGAATGT AGAAGGCTAAAGGCACTTTGGTTGAATGAGAACCCTGCACTGAAGGAAGGTGTTGACAAA GTTATTCTTGACGGTCTACCTGAATTGGAAATATACAATTCACATTTTACGAGGAAAGCT GGAGAATGGGCTTTAGGTTTCTGTGGGGATATTATTGGAGCAGACAATCCCTGTTCCTCA GCGGAAAGCATACCATTGGAGAATATTGCGTCTCTCGATCTCTCAGATAGGTGTATCCAC AAACTACCAGTGGTGTTCTCTCCTAGAAAACTTTCCTCCCTGTTGAGCTTGAACATCCGT GGTAATCCTTTGGATCAAATGTCCAGTGACGATCTCTTGAAGTTAATTAGTGGATTTACC CAGTTACAAGAGTTGGAGGTTGATATTCCTGGCTCTCTTGGAAACAGTGCTATTTCCATT CTTGAGTGTCTTCCTAATCTATCTTTGCTAAATGGTATCAATGTGGCAAGTATAATAGAG AGTGGTAAGCATATAATTGATTCTGCACTTAAACCACGTCTGCCTGAATGGTCACCACAA GAATCCCTTCCTGAAAGAGTTATTGGTGCAATGTGGTTATATCTTATGACATACCGGCTT GCTGATGAAGAAAAGATCGATGAAACACCTGTTTGGTATGTCATGGATGAGCTGGGTTCA GCTATGCGCCACAGTGACGATGCAAACTTCAGAATAGCACCTTTCCTGTTCATGCCCGAT GGTAAACTAGCTTCTGCCATAAGTTACACAATTTTGTGGCCTGTTCATGATGTTCATACT GGAGAAGAGTGCACTCGTGATTTCTTGTTTGGTGTTGGCGAGGACAAACAACGCTCGGCT AGGCTTACAGCCTGGTTCCACACACCAGAGAATTATTTTATCCAGGAATTCAGAAAGTAC AAGGAACAACTTCAATCAAGCAGTATCTGTCCTTCAAGAAAAGTAACACCGGTGACCAAA AGTATCCGTCCAAGTGATGGCCATGCACTTCGAGTATTTACCGACATACCCCAAGTAGAG GAGTTTCTAACACGTCCAGAATTTGTTCTCACATCTGATCCAAAGGAAGCTGACATCATT TGGGTAAGCATGCAAGTGGATTCGGAATTAAAGAATGCACTAGGACTTACAGACCAACAA TATACAAATCAATTTCCTTTCGAAGCTTGCCTGGTCATGAAACATCACTTGGCAGAGACT ATCCACAAGGCATGGGGTTCACCTGAATGGCTTCAACCTACGTATAACCTGGAGACACAT TTATCTCCACTCATTGGAGATTACTGTGTGAGAAAGAGAGATGGTATGGATAACTTATGG ATTATGAAGCCTTGGAATATGGCAAGAACAATTGACACTACTGTTACTGGTGATTTATCT GCTATCATTAGACTCATGGAGACAGGTCCCAAAATATGCCAAAAATATATCGAATGCCCT GCACTTTTCCAAGGAAGGAAGTTTGATCTGCGGTATATTGTTTTCGTCCGCAGTATATGC CCTTTAGAGATATTTCTTTCTGATGTGTTTTGGGTTAGGTTAGCAAACAATCAGTACACT CTGGAGAAAACAAGCTTTTTTGAATATGAAACCCATTTCACCGTGATGAATTATATTGGA AGGATGAACCATATGAACACACCAGAGTTTGTCAAGGAGTTTGAGAAGGAGCACCAAGGT CAGCTTGCATTTTTCTCTTTATATTATGCGTGTCTAGTTACTGACTTCTGACTAAAATTT TAGTTAAATGGCTGGAGATCCATGGACGCATACGGGATATGATACGATGTGTCTTTGAGT CAGCCACAGCTGTTCATCCTGAGATGCAGAACCCGTTCTCTAGGGCTATCTATGGGGTTG ATGTCATGCTTGATAATAAATTCAATCCGAAGATTTTGGAGGTGACATATTGTCCGGACT GCACGAGGGCATGCAAATATGACACTCAAGCTCTCGTGGGAAGCCAGGGTGTCATCAGGG GCACTGAATTTTTCAATACAGTGTTTGGCTGCCTCTTTCTGGACGAGCTTAAAGATGTAT CGCCGCTGTAATCACCACAACAAGGTTGCTGTAACACCGAAGTTCAACACAATACACGCA CATGTGAGTTGTGATCCTGTCGTTTTATATGCCATACATATCAAATTTGCTCAGTACAAT TACAAAGGGGGTGTGATGCTGCCTCCTGCCTGTACCATGCTTCGGATCAGATTGAAATGA GCTTGACG