Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0178500-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4136960:4142715:-1 gene:Os03g0178500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os03t0178500-01)
Sequence

ATGAAGCAGCGGCATGCCACCGCCACCGCCTCGGCGCTCTTCGCGCTGCTCCCGCTGTCG
CTGCTGCTCTTCCGGCTGCTCGTCCTCCTCGTGCGGCTCCGCCTCGCCGCCTTCCGCGAC
GCCGCGCTGTCCCTCCACTTCCTCGCCCGCCTCCGCATCCGCCCCGTCCACCTCCGCCTC
CCGGGCACCGACGCCACCACGGTCCGCGTCTGGTGCCCCGCGGCGCCGTCCGCCAAGCCG
CCGCTGCTCCTCCTCCACGGCTTCGGCGGTGACTCCAAGTGGACGTGGGCGCGCAACCTC
CCGGCGCTGTCGCGCCACTTCCACGTCTACGCGCCCGACCTCCTCTTCTTCGGCGCGCAC
TCCCGATCCGCCTCGCCGCTCCGCACCGTCGCGTTCCAGGCCCGGTGCGCCGCCGAGGCC
ATGCGGCTCCTCGGCGTCGACCGCTACGACGTGGTCGGGATCAGCTACGGCGGGTTCGTG
GCGTACCGGCTGGCCGCCGTGGAGGGCAGGGACCGGGTGCCGAGGGTGGTGGTGATGACC
AGCGGCGTGGCGGCGACGCCGGGGGAGATGAGGGAGATGGCGGCGCGGGAGGAGAGGGCC
GTCGAGGAGTCGCTGCTCCCGGAGACCGCCGACGGGCTGCGCCGCCTCGTCCGCCGGTCC
ATGCACCGCCCGCCGCCATGGATGCCCGACTTCGTGCTCGACGATTTCATCAAGTTGATG
TGCGTGGTTCAGAGGAAGGAGAGGGCCGAGCTGCTACACGAGCTTCTCAAGAACGGAGCT
GGCATCGATCCCCTCCCCGTTCTCACTCAGAAAACGTTGATTCTGTGGGGTGACAAGGAC
CAGGTGTTCCCGTTGGATCTCGGCCACAGACTGCAAAGGCATCTGGGAGACGTGTCACGG
CTAGAGATCATCAAGGACGCAGGGCACGCGTTGCAGTTGGAGGGAGCCGACCAAGTGAAC
CGCTTCATCAAGTCTTTCCTCCTGGACTCGTGA

Peptide Sequence

PEP ID

Os03t0178500-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4136960:4142715:-1 gene:Os03g0178500 transcript:Os03t0178500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os03t0178500-01)
Sequence

MKQRHATATASALFALLPLSLLLFRLLVLLVRLRLAAFRDAALSLHFLARLRIRPVHLRL
PGTDATTVRVWCPAAPSAKPPLLLLHGFGGDSKWTWARNLPALSRHFHVYAPDLLFFGAH
SRSASPLRTVAFQARCAAEAMRLLGVDRYDVVGISYGGFVAYRLAAVEGRDRVPRVVVMT
SGVAATPGEMREMAAREERAVEESLLPETADGLRRLVRRSMHRPPPWMPDFVLDDFIKLM
CVVQRKERAELLHELLKNGAGIDPLPVLTQKTLILWGDKDQVFPLDLGHRLQRHLGDVSR
LEIIKDAGHALQLEGADQVNRFIKSFLLDS

Transcript Sequence

Transcript ID

Os03t0178500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4136960:4142715:-1 gene:Os03g0178500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os03t0178500-01)
Sequence

GTGTGCACGCACAGTGCACCGCGTGTCCGCGCCATGAAGCAGCGGCATGCCACCGCCACC
GCCTCGGCGCTCTTCGCGCTGCTCCCGCTGTCGCTGCTGCTCTTCCGGCTGCTCGTCCTC
CTCGTGCGGCTCCGCCTCGCCGCCTTCCGCGACGCCGCGCTGTCCCTCCACTTCCTCGCC
CGCCTCCGCATCCGCCCCGTCCACCTCCGCCTCCCGGGCACCGACGCCACCACGGTCCGC
GTCTGGTGCCCCGCGGCGCCGTCCGCCAAGCCGCCGCTGCTCCTCCTCCACGGCTTCGGC
GGTGACTCCAAGTGGACGTGGGCGCGCAACCTCCCGGCGCTGTCGCGCCACTTCCACGTC
TACGCGCCCGACCTCCTCTTCTTCGGCGCGCACTCCCGATCCGCCTCGCCGCTCCGCACC
GTCGCGTTCCAGGCCCGGTGCGCCGCCGAGGCCATGCGGCTCCTCGGCGTCGACCGCTAC
GACGTGGTCGGGATCAGCTACGGCGGGTTCGTGGCGTACCGGCTGGCCGCCGTGGAGGGC
AGGGACCGGGTGCCGAGGGTGGTGGTGATGACCAGCGGCGTGGCGGCGACGCCGGGGGAG
ATGAGGGAGATGGCGGCGCGGGAGGAGAGGGCCGTCGAGGAGTCGCTGCTCCCGGAGACC
GCCGACGGGCTGCGCCGCCTCGTCCGCCGGTCCATGCACCGCCCGCCGCCATGGATGCCC
GACTTCGTGCTCGACGATTTCATCAAGTTGATGTGCGTGGTTCAGAGGAAGGAGAGGGCC
GAGCTGCTACACGAGCTTCTCAAGAACGGAGCTGGCATCGATCCCCTCCCCGTTCTCACT
CAGAAAACGTTGATTCTGTGGGGTGACAAGGACCAGGTGTTCCCGTTGGATCTCGGCCAC
AGACTGCAAAGGCATCTGGGAGACGTGTCACGGCTAGAGATCATCAAGGACGCAGGGCAC
GCGTTGCAGTTGGAGGGAGCCGACCAAGTGAACCGCTTCATCAAGTCTTTCCTCCTGGAC
TCGTGAAATGGGCCGGAAGTTGGGAGTGGCCCAGTACTAGAGCCCTGCTAAGAAGTACTA
GAAGCAGGAGCTCTCGGAAAGGCCCAAACCAATCCAACTGTAACCCGGATTTGCCCTCTA
TCCTCAGATGCCGATAGTGTAATGACCCTATTTGGGATGTAAAAAATATATACCGTGAAC
TATTGATTAATTGTCAAATATGAAATCTCCCAATAAAAAAATGTGATGCTCACGGACTCT
GTTTTTTCCTCTTGACTATGGAACTGCAGGCAGATGGCAGTACCACTAAAGTGGCTAATT
TATTGTTGTGATCATTCTGAGATCGTC