Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0178400-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4133458:4136490:-1 gene:Os03g0178400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-1 domain containing protein. (Os03t0178400-01)
Sequence

ATGGGCGCCAGCCTGAGCCTCGTGCCGCTCCTCGACTACTTCGCGCGCCGGGAGTTCGCC
GCCGCCGGCCTCAGCCCCGGCGCCGTCACGCTGCCGTACCCGGGCGACGGCGGCGAGGCG
ACCTGCACCGTCCACTACTGGGCCTCCACGGGGGAGCCGCTGCTGCCGCCGCTGCTGCTC
GTGCATGGGTTCGGCCCACGGGCCACCTGGCAGTGGCGCTGCCAGGTGGGCCCACTGTCC
CGGCATTTCCACCTCATCGTGCCCGACCTCATCGGCTTCGGCGGCAGCTCGTTCGGCGGC
GACTCCGCCGCCTCGCCGCCGTCGGAGGCTACGCAGGCGGCGGCGCTGGCGGCGCTGCTG
GACGCGCTGCCGGGGATGAAGGGGAGGCGGGTGGCGGTGGCGGGGACCAGCTACGGCGGG
TTCGTGGCGTACTGGCTGGCGCGCACGGCGGGGGCCGGGAGGGTTGGCCCCGTGGTGATC
GCGAGCTCCGACCTGCTCAAGACGGCGGCGGACGACCGGGGGTTCCTGAAGAGGGCCGGC
GACGGGTGGAGCGGCGTGGAGGAGGTGCTCCTGCCGGCCGAGCCCGCCGCGATGCGGAAG
CTGCTGGAGATGGCCTCGTGCCGGCCGCCGCCGCCGGTGCTGATGCCGGACTTCATCCTC
CGCGACTTCATCCAGAAACTTTTCACGGAGAACAGAGAGCAACTTATTCAACTCTTCAAG
GGGATCACAGTTGGCACAGACAAGTTCCCAGTAACTCCAATATCTCAGGAAGTGTTGATT
GTCTGGGGAGAGCAAGATCAGTTGTTCCCGGTTGAGAAGGCTTATGCAGTTCAGAGTTCT
TTGGATGGGAAAGCTAGAGTGGAAATCATAAGCAAAACAGGCCATGCTCCACAGCTGGAG
GATCCAACCCGGTTCAACAAGATCCTGCTAGACTTCTTGCTGGCTACTCACAAGCCTGAT
CCTTCGTCAAATGGCGCATCGCAATAA

Peptide Sequence

PEP ID

Os03t0178400-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4133458:4136490:-1 gene:Os03g0178400 transcript:Os03t0178400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-1 domain containing protein. (Os03t0178400-01)
Sequence

MGASLSLVPLLDYFARREFAAAGLSPGAVTLPYPGDGGEATCTVHYWASTGEPLLPPLLL
VHGFGPRATWQWRCQVGPLSRHFHLIVPDLIGFGGSSFGGDSAASPPSEATQAAALAALL
DALPGMKGRRVAVAGTSYGGFVAYWLARTAGAGRVGPVVIASSDLLKTAADDRGFLKRAG
DGWSGVEEVLLPAEPAAMRKLLEMASCRPPPPVLMPDFILRDFIQKLFTENREQLIQLFK
GITVGTDKFPVTPISQEVLIVWGEQDQLFPVEKAYAVQSSLDGKARVEIISKTGHAPQLE
DPTRFNKILLDFLLATHKPDPSSNGASQ

Transcript Sequence

Transcript ID

Os03t0178400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4133458:4136490:-1 gene:Os03g0178400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-1 domain containing protein. (Os03t0178400-01)
Sequence

ACTGCGAGAGCTCAGTGGAGGGAGAAGACCATCACCACCATGGGCGCCAGCCTGAGCCTC
GTGCCGCTCCTCGACTACTTCGCGCGCCGGGAGTTCGCCGCCGCCGGCCTCAGCCCCGGC
GCCGTCACGCTGCCGTACCCGGGCGACGGCGGCGAGGCGACCTGCACCGTCCACTACTGG
GCCTCCACGGGGGAGCCGCTGCTGCCGCCGCTGCTGCTCGTGCATGGGTTCGGCCCACGG
GCCACCTGGCAGTGGCGCTGCCAGGTGGGCCCACTGTCCCGGCATTTCCACCTCATCGTG
CCCGACCTCATCGGCTTCGGCGGCAGCTCGTTCGGCGGCGACTCCGCCGCCTCGCCGCCG
TCGGAGGCTACGCAGGCGGCGGCGCTGGCGGCGCTGCTGGACGCGCTGCCGGGGATGAAG
GGGAGGCGGGTGGCGGTGGCGGGGACCAGCTACGGCGGGTTCGTGGCGTACTGGCTGGCG
CGCACGGCGGGGGCCGGGAGGGTTGGCCCCGTGGTGATCGCGAGCTCCGACCTGCTCAAG
ACGGCGGCGGACGACCGGGGGTTCCTGAAGAGGGCCGGCGACGGGTGGAGCGGCGTGGAG
GAGGTGCTCCTGCCGGCCGAGCCCGCCGCGATGCGGAAGCTGCTGGAGATGGCCTCGTGC
CGGCCGCCGCCGCCGGTGCTGATGCCGGACTTCATCCTCCGCGACTTCATCCAGAAACTT
TTCACGGAGAACAGAGAGCAACTTATTCAACTCTTCAAGGGGATCACAGTTGGCACAGAC
AAGTTCCCAGTAACTCCAATATCTCAGGAAGTGTTGATTGTCTGGGGAGAGCAAGATCAG
TTGTTCCCGGTTGAGAAGGCTTATGCAGTTCAGAGTTCTTTGGATGGGAAAGCTAGAGTG
GAAATCATAAGCAAAACAGGCCATGCTCCACAGCTGGAGGATCCAACCCGGTTCAACAAG
ATCCTGCTAGACTTCTTGCTGGCTACTCACAAGCCTGATCCTTCGTCAAATGGCGCATCG
CAATAAGTCGGATGCCCACTCGAATATTTGATTGATTGAAATAAGATGGTTAGCCACCTT
CGTCCATTCATAGCTAAAATTTGTACTACGAATTATTTGAGAACGCACATTGAGAAATAA
TTAAAGAAAATGGGTGGATTGTTGATTTGTTTT