Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0178300-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:4131128:4132544:-1 gene:Os03g0178300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0178300-01)
Sequence

ATGGGCTTCGGCGTCATCCCGCTGATGGAGTACATCGCCCGCCGCGCCTTCCTCGCCGCC
GGCCTCCGCCCCAGCACCGTCACGCTCCCCTCCACCTCCGGCGACGGTGAGGCCCGGACC
ATCCACTACTGGGCGCCGCCGGGGGAGCCGCGCCTCCCGCCGCTCCTCCTCATCCACGGC
TTTGGCCCCATGGCGACGTGGCAGTGGCGGCGCCAGGTGGGCCCCTTCTCCCGCCGCTTC
CACATCATCGTCCCGGACCTCCTCTGCTTCGGCGCCTCCTCCTCCTCCTCCTCCCCGCCG
CCGTCCGAGTCGGCGCAGGCCGCCGCGCTGCTCGACGCGCTCCCGGCGCTCGTGGGGACG
GCGGCGCGCGTCGCCGTGGCCGGCACCAGCTACGGCGGGTTCGTGGCCTACGCCATGGCG
CGCAAGGCGGGGCCCGAGAGGGTCGGCCCCGTGGCGATATCCAACTCCGATTTGCTCAAG
ACGGCGGAGGACGACGGCGCGTTCCTCGAGCGCGCCGGCAGCGGGTGGACGCACCCGGCC
GACGTGCTCATGCCGCTGGACGCGCGCGGAGCTCGCCGGCTCATGGAGCTGACCTTCTAC
CGGAAGCAGGCCGGCGCCATGCTACCGGACTTCGTGATCCGAGACATCATGAAGGTGACG
AAGGATCCATATAAATCACTCAAAATTCCAGCGAATTCCTCGTGTTCTCATGTTTATATT
TTGAACATTGTGCAGAGCACAAGTTTCTTTCATAGCTTGGGTGCACTGTTATGCTAG

Peptide Sequence

PEP ID

Os03t0178300-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:4131128:4132544:-1 gene:Os03g0178300 transcript:Os03t0178300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0178300-01)
Sequence

MGFGVIPLMEYIARRAFLAAGLRPSTVTLPSTSGDGEARTIHYWAPPGEPRLPPLLLIHG
FGPMATWQWRRQVGPFSRRFHIIVPDLLCFGASSSSSSPPPSESAQAAALLDALPALVGT
AARVAVAGTSYGGFVAYAMARKAGPERVGPVAISNSDLLKTAEDDGAFLERAGSGWTHPA
DVLMPLDARGARRLMELTFYRKQAGAMLPDFVIRDIMKVTKDPYKSLKIPANSSCSHVYI
LNIVQSTSFFHSLGALLC

Transcript Sequence

Transcript ID

Os03t0178300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:4131128:4132544:-1 gene:Os03g0178300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os03t0178300-01)
Sequence

ACGTAAGTCACCATGGGCTTCGGCGTCATCCCGCTGATGGAGTACATCGCCCGCCGCGCC
TTCCTCGCCGCCGGCCTCCGCCCCAGCACCGTCACGCTCCCCTCCACCTCCGGCGACGGT
GAGGCCCGGACCATCCACTACTGGGCGCCGCCGGGGGAGCCGCGCCTCCCGCCGCTCCTC
CTCATCCACGGCTTTGGCCCCATGGCGACGTGGCAGTGGCGGCGCCAGGTGGGCCCCTTC
TCCCGCCGCTTCCACATCATCGTCCCGGACCTCCTCTGCTTCGGCGCCTCCTCCTCCTCC
TCCTCCCCGCCGCCGTCCGAGTCGGCGCAGGCCGCCGCGCTGCTCGACGCGCTCCCGGCG
CTCGTGGGGACGGCGGCGCGCGTCGCCGTGGCCGGCACCAGCTACGGCGGGTTCGTGGCC
TACGCCATGGCGCGCAAGGCGGGGCCCGAGAGGGTCGGCCCCGTGGCGATATCCAACTCC
GATTTGCTCAAGACGGCGGAGGACGACGGCGCGTTCCTCGAGCGCGCCGGCAGCGGGTGG
ACGCACCCGGCCGACGTGCTCATGCCGCTGGACGCGCGCGGAGCTCGCCGGCTCATGGAG
CTGACCTTCTACCGGAAGCAGGCCGGCGCCATGCTACCGGACTTCGTGATCCGAGACATC
ATGAAGGTGACGAAGGATCCATATAAATCACTCAAAATTCCAGCGAATTCCTCGTGTTCT
CATGTTTATATTTTGAACATTGTGCAGAGCACAAGTTTCTTTCATAGCTTGGGTGCACTG
TTATGCTAGCAAACACACTAATGTTGCATTTCAGCAATTTGCAGAAACTTTTTTCGGACA
AGAGGGAAGAGAAGATCGAGCTTATGAATGCTACAACTGTGGGCACGGATGCATTCCAGC
TTACACCATTGGCTCAGGATGTATTGCTTATCTGGGGAGACCATGATCAGATATTCCCCT
TGGATAAGGCATTTGCTGTCAAGAGGTAAAATAATTCACAGCAATACAAAATTTGCAACT
GCAGATTAACCTTTTTCCTTGTGCTTATGACGGTTGCAGCTGCTTGGGAGATCATGTTAG
ATTGGAGATCATCAAGAAGACAGGCCACGTGCCTCAAATGGAGGACCCGGATCGGTTCAA
CAAGATCGTGTTGGACTTCTTGCTTGGATCTCAAGGTTCCCCTTCAAACGAGCATTAGAT
ACATATGGTCGACTGGTTTGATTCAGCTTTGCAGAAAACCCATGACCCTTAAAAATACAA
GAAAAGAATTTTGGGGGGGAGGGGCACGCTTGAAGTGTGATGTACGATGTTAATAGCCTA
ATAACAACTCCAAAATCAAATTCACTGGATGCATACAGAATAAAAATGCTTCGTGTACTG
CTGTGATGTAGTATAAACAGTGAGCATGCGATTCATC