Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0178000-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:4116944:4119686:1 gene:Os03g0178000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ELONGATION FACTOR 1A2 description:EF-1 alpha. (Os03t0178000-01);EF-1 alpha. (Os03t0178000-02)
Sequence	ATGGGTAAGGAGAAGACGCACATCAACATTGTGGTCATTGGCCACGTCGACTCCGGCAAG TCGACCACCACGGGCCATCTGATCTACAAGCTTGGAGGTATCGACAAGCGTGTGATCGAG AGGTTCGAGAAGGAAGCCGCTGAGATGAACAAGAGGTCCTTCAAGTACGCGTGGGTGCTC GACAAGCTCAAGGCCGAGCGTGAGAGAGGTATCACCATTGATATCGCCCTGTGGAAGTTC GAGACCACCAAGTACTACTGCACGGTCATCGATGCCCCTGGTCACCGTGACTTCATCAAG AACATGATCACGGGTACCTCCCAGGCTGACTGTGCCGTGCTCATCATTGACTCCACCACT GGTGGTTTTGAGGCTGGTATCTCCAAGGATGGCCAGACCCGTGAGCACGCTCTTCTTGCT TTCACTCTTGGAGTGAAGCAGATGATCTGCTGCTGCAACAAGATGGATGCCACCACTCCC AAGTACTCCAAGGCCCGTTATGATGAAATCGTGAAGGAAGTCTCATCCTACCTGAAGAAG GTCGGCTACAACCCTGACAAGATTCCCTTTGTTCCCATCTCTGGGTTTGAGGGTGACAAC ATGATTGAGAGGTCCACCAACCTTGACTGGTACAAGGGCCCCACCTTGCTTGAGGCTCTT GACCAGATCAACGAGCCCAAGAGGCCATCAGACAAGCCCCTACGTCTTCCCCTTCAGGAC GTGTACAAGATCGGCGGTATTGGTACCGTGCCTGTGGGTCGTGTTGAGACTGGTGTCCTC AAGCCTGGTATGGTGGTGACCTTTGGTCCCAGCGGTCTGACCACTGAGGTCAAGTCGGTT GAGATGCACCACGAGGCTCTCCAGGAGGCTCTTCCTGGTGACAACGTTGGGTTCAACGTG AAGAACGTTGCCGTGAAGGATCTGAAGCGTGGGTACGTGGCCTCTAACTCCAAGGATGAC CCTGCCAAGGAGGCTGCCAGCTTCACCTCCCAGGTGATCATCATGAACCACCCTGGGCAG ATCGGCAATGGCTACGCCCCAGTGCTGGACTGCCACACCTCACACATTGCCGTCAAGTTT GCTGAGCTGGTGACCAAGATCGACAGACGATCCGGCAAGGAGCTGGAGAAGGAGCCCAAG TTCCTCAAGAACGGTGATGCTGGTATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTG GAGACCTTCTCTGAGTACCCTCCTCTTGGTCGTTTTGCCGTGCGTGACATGAGGCAAACG GTGGCTGTTGGCGTCATCAAGAACGTGGAGAAGAAGGACCCAACCGGTGCCAAGGTGACC AAGGCTGCCGCCAAGAAGAAATGA

Peptide Sequence

PEP ID	Os03t0178000-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:4116944:4119686:1 gene:Os03g0178000 transcript:Os03t0178000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ELONGATION FACTOR 1A2 description:EF-1 alpha. (Os03t0178000-01);EF-1 alpha. (Os03t0178000-02)
Sequence	MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT VAVGVIKNVEKKDPTGAKVTKAAAKKK

Transcript Sequence

Transcript ID	Os03t0178000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:4116944:4119686:1 gene:Os03g0178000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ELONGATION FACTOR 1A2 description:EF-1 alpha. (Os03t0178000-01);EF-1 alpha. (Os03t0178000-02)
Sequence	AGCCGCCGCCGCCGCAGCCTCCTCCTCTCGTCTTCTCCTTCGAGGTCAGCTTCAGATCTT CTCTCTTCTCCATATTTGCGCTTGTTCATGTTCGTTCGTAGCTGCAGATCTGGTTTAGTA ACGTGAGGTTTCGGTGATTTCGAGCTGGGGCATGTTGTGTTCGCCCATTTTTTGTAACTT TTTTCTGTGTATTCATCTCACTGCAATGATCTTCGTCTGCTGTTCGTTGACGCGACGATA AACTTGATTTGTCAGTGAATCATCTGCATAGGTTGAAAATTATCGGCAGAATCGGACGAT GAACTTGATTTGGTGCAGAATCATTTACATAAGTTGAAAATTATCGGTGGAATCACTAGA AGGATTTTTATCTACAATCCGTTCGCATAGATCTCTTTCCGTGTTTCTGTAATTTTTTTT ATTCTACTACTGCTGAGTAGATGTTATCGTCTGTACCCGGTTTGGTTGGGTCGATTACTG CGCCTCTGTGCAAATCATCCGCCGATTAGCTGCGTTAGCACTTTTATAGCTGCCCAAGTT TGATCTGTGAGCTTGCCTGCTATATTTATTTAGAGTTGTAAATTATACACTTATCTTTGT TTCTAATATTTGTTTCGTTCTGTGCTGCAGTTGTTAGCTCCCTCCTTATTCAACCATGGG TAAGGAGAAGACGCACATCAACATTGTGGTCATTGGCCACGTCGACTCCGGCAAGTCGAC CACCACGGGCCATCTGATCTACAAGCTTGGAGGTATCGACAAGCGTGTGATCGAGAGGTT CGAGAAGGAAGCCGCTGAGATGAACAAGAGGTCCTTCAAGTACGCGTGGGTGCTCGACAA GCTCAAGGCCGAGCGTGAGAGAGGTATCACCATTGATATCGCCCTGTGGAAGTTCGAGAC CACCAAGTACTACTGCACGGTCATCGATGCCCCTGGTCACCGTGACTTCATCAAGAACAT GATCACGGGTACCTCCCAGGCTGACTGTGCCGTGCTCATCATTGACTCCACCACTGGTGG TTTTGAGGCTGGTATCTCCAAGGATGGCCAGACCCGTGAGCACGCTCTTCTTGCTTTCAC TCTTGGAGTGAAGCAGATGATCTGCTGCTGCAACAAGATGGATGCCACCACTCCCAAGTA CTCCAAGGCCCGTTATGATGAAATCGTGAAGGAAGTCTCATCCTACCTGAAGAAGGTCGG CTACAACCCTGACAAGATTCCCTTTGTTCCCATCTCTGGGTTTGAGGGTGACAACATGAT TGAGAGGTCCACCAACCTTGACTGGTACAAGGGCCCCACCTTGCTTGAGGCTCTTGACCA GATCAACGAGCCCAAGAGGCCATCAGACAAGCCCCTACGTCTTCCCCTTCAGGACGTGTA CAAGATCGGCGGTATTGGTACCGTGCCTGTGGGTCGTGTTGAGACTGGTGTCCTCAAGCC TGGTATGGTGGTGACCTTTGGTCCCAGCGGTCTGACCACTGAGGTCAAGTCGGTTGAGAT GCACCACGAGGCTCTCCAGGAGGCTCTTCCTGGTGACAACGTTGGGTTCAACGTGAAGAA CGTTGCCGTGAAGGATCTGAAGCGTGGGTACGTGGCCTCTAACTCCAAGGATGACCCTGC CAAGGAGGCTGCCAGCTTCACCTCCCAGGTGATCATCATGAACCACCCTGGGCAGATCGG CAATGGCTACGCCCCAGTGCTGGACTGCCACACCTCACACATTGCCGTCAAGTTTGCTGA GCTGGTGACCAAGATCGACAGACGATCCGGCAAGGAGCTGGAGAAGGAGCCCAAGTTCCT CAAGAACGGTGATGCTGGTATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTGGAGAC CTTCTCTGAGTACCCTCCTCTTGGTCGTTTTGCCGTGCGTGACATGAGGCAAACGGTGGC TGTTGGCGTCATCAAGAACGTGGAGAAGAAGGACCCAACCGGTGCCAAGGTGACCAAGGC TGCCGCCAAGAAGAAATGAGCATCGTTGAAGTGGTGGTTATGCTGGCTGCATTTGAGATA TCTTAGCGTTCGTTAAGTTTTGCCCACGGCCATGGCACTCGTTGCATGGACCGTTAATAT CTGCTCGCAATGTGCACTATGTTAGTCGTTTAAAACTCGTTTATTTCTATTCGGTT