Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0174600-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3990111:3997757:1 gene:Os03g0174600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os03t0174600-01);Similar to tRNA methyltransferase. (Os03t0174600-02)
Sequence	ATGCTGCGCGTGGTCTCCACCCTCCCCGCGCTCCGCCCGCTCCTCGCCGGGAGCACGCTC CTCCTGAACGCTAGACCTCTGCTCCGCTCCCGCCTGACTCGGCGGCCGTTTCGCGCCGTC TCGTCCTCCACGGCGTCCCCGTCGAGCTCCAGCTCCGGCGCCAGGGACTTCGGGGGTGTG GATTTCGGCGATGAGCGCCTTCTGCGGTGCGCGGCGGCGGGGAGAGCGCCGCTGCGGGTG GCGGTGCTGGTGAGCGGCGGGGTGGACAGCAGCGTCGCGCTCCGCCTCCTCCACGCCGCC GGCCACCGCTGCACCGCTTTCTACCTCAAAATCTGGTTCCAGGAAGATTTCAGGAACTTT TGGTCTGAATGCCCGTGGGACGACGATTTGAAGTACGCGCAAGCTGTGTGTGACAAGATT GATGTACCGTTGGAGGTAGTCCATCTATCTGATGAGTATTGGAACCATGTGGTATCTCAC ATAATTAACGAGTATCGCAGTGGCCGTACTCCGAACCCTGATGTTCTTTGCAACACAAGA ATAAAGTTTGGAGCTTTCTTAGAAGCTATTGAAAATTTGGGATTTGATTACATAGCATCT GGACATTATGCACATGTAGTTCATCCATCACCTGACGATGTTGAAGGGCCATCAGTCCTC CAACTTTCAAAAGACAAGGTGAAGGATCAAACTTATTTCCTTTCACATCTATCTCAGACC CAGCTTAGAAGGCTTCTTTTTCCACTGGGATGTATAACAAAGGATGAAGTGCGCAGGCTG GCTGCTCAGATGGACTTGCCTAACCAAGATAGAAAGGATTCCCAGGGGATATGTTTTCTT GGCAAGGTCAAATTTAGTGAGTTTGTTGAAAGACAGATAGGAGAGATGGAAGGAGTACTG TTGGAAGCTGAAACTGGAGACTACCTAGGGACACACCGTGGATTTTGGTTTTATACAATT GGTCAGCGACAAGGATTGCGCCTTCCTGGCGGACCCTGGTATGTGGTTGAGAAAGGTGTT CAAAACAATGTGGTTTTTGTCTCAAGGAATTACTACTCGCTGGATAAGAGAAGGCGGACA TTTCGTGTTGGATCGCTGAACTGGTTTAGCAATTCTGGACCAACAAACAATGAGCAACTT AAATGCAAGGTACGTCATAGTCCTGAATTTCATGATTGCACCGTGACACAAGAGCAAACA TCAGAACATGGAGTTATTTTGGTGGTGCGTCTGTCTGAAGATGATCAAGGTTTAGCAGCT GGTCAGTTTGCGGCCTTCTACCGTGACAATTTATGCCTTGGGTCAGGCATAATTCTGGAT TCTTGGGACGAAATGAATTTTCCAGTCTGTGCAAGGGCTTTAGAAATTGCTAGAATGGAG GATAAGTCCAGACTGGGGAAGCCAGTAAAGATAATGAACTTAGAACATATCGTGAAATCA GAAAAGGAGGCTATTGAAGTGGCATGA

Peptide Sequence

PEP ID	Os03t0174600-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3990111:3997757:1 gene:Os03g0174600 transcript:Os03t0174600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os03t0174600-01);Similar to tRNA methyltransferase. (Os03t0174600-02)
Sequence	MLRVVSTLPALRPLLAGSTLLLNARPLLRSRLTRRPFRAVSSSTASPSSSSSGARDFGGV DFGDERLLRCAAAGRAPLRVAVLVSGGVDSSVALRLLHAAGHRCTAFYLKIWFQEDFRNF WSECPWDDDLKYAQAVCDKIDVPLEVVHLSDEYWNHVVSHIINEYRSGRTPNPDVLCNTR IKFGAFLEAIENLGFDYIASGHYAHVVHPSPDDVEGPSVLQLSKDKVKDQTYFLSHLSQT QLRRLLFPLGCITKDEVRRLAAQMDLPNQDRKDSQGICFLGKVKFSEFVERQIGEMEGVL LEAETGDYLGTHRGFWFYTIGQRQGLRLPGGPWYVVEKGVQNNVVFVSRNYYSLDKRRRT FRVGSLNWFSNSGPTNNEQLKCKVRHSPEFHDCTVTQEQTSEHGVILVVRLSEDDQGLAA GQFAAFYRDNLCLGSGIILDSWDEMNFPVCARALEIARMEDKSRLGKPVKIMNLEHIVKS EKEAIEVA

Transcript Sequence

Transcript ID	Os03t0174600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3990111:3997757:1 gene:Os03g0174600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os03t0174600-01);Similar to tRNA methyltransferase. (Os03t0174600-02)
Sequence	GAGAAGAGAACACAAACCCAATCCAGAGGAGGGAGGAGCGCCGCCGCCGCCGCCGCCGCT CAGGCGAGAGGTTGCCGGAGCCGCCGCCACCGATGCTGCGCGTGGTCTCCACCCTCCCCG CGCTCCGCCCGCTCCTCGCCGGGAGCACGCTCCTCCTGAACGCTAGACCTCTGCTCCGCT CCCGCCTGACTCGGCGGCCGTTTCGCGCCGTCTCGTCCTCCACGGCGTCCCCGTCGAGCT CCAGCTCCGGCGCCAGGGACTTCGGGGGTGTGGATTTCGGCGATGAGCGCCTTCTGCGGT GCGCGGCGGCGGGGAGAGCGCCGCTGCGGGTGGCGGTGCTGGTGAGCGGCGGGGTGGACA GCAGCGTCGCGCTCCGCCTCCTCCACGCCGCCGGCCACCGCTGCACCGCTTTCTACCTCA AAATCTGGTTCCAGGAAGATTTCAGGAACTTTTGGTCTGAATGCCCGTGGGACGACGATT TGAAGTACGCGCAAGCTGTGTGTGACAAGATTGATGTACCGTTGGAGGTAGTCCATCTAT CTGATGAGTATTGGAACCATGTGGTATCTCACATAATTAACGAGTATCGCAGTGGCCGTA CTCCGAACCCTGATGTTCTTTGCAACACAAGAATAAAGTTTGGAGCTTTCTTAGAAGCTA TTGAAAATTTGGGATTTGATTACATAGCATCTGGACATTATGCACATGTAGTTCATCCAT CACCTGACGATGTTGAAGGGCCATCAGTCCTCCAACTTTCAAAAGACAAGGTGAAGGATC AAACTTATTTCCTTTCACATCTATCTCAGACCCAGCTTAGAAGGCTTCTTTTTCCACTGG GATGTATAACAAAGGATGAAGTGCGCAGGCTGGCTGCTCAGATGGACTTGCCTAACCAAG ATAGAAAGGATTCCCAGGGGATATGTTTTCTTGGCAAGGTCAAATTTAGTGAGTTTGTTG AAAGACAGATAGGAGAGATGGAAGGAGTACTGTTGGAAGCTGAAACTGGAGACTACCTAG GGACACACCGTGGATTTTGGTTTTATACAATTGGTCAGCGACAAGGATTGCGCCTTCCTG GCGGACCCTGGTATGTGGTTGAGAAAGGTGTTCAAAACAATGTGGTTTTTGTCTCAAGGA ATTACTACTCGCTGGATAAGAGAAGGCGGACATTTCGTGTTGGATCGCTGAACTGGTTTA GCAATTCTGGACCAACAAACAATGAGCAACTTAAATGCAAGGTACGTCATAGTCCTGAAT TTCATGATTGCACCGTGACACAAGAGCAAACATCAGAACATGGAGTTATTTTGGTGGTGC GTCTGTCTGAAGATGATCAAGGTTTAGCAGCTGGTCAGTTTGCGGCCTTCTACCGTGACA ATTTATGCCTTGGGTCAGGCATAATTCTGGATTCTTGGGACGAAATGAATTTTCCAGTCT GTGCAAGGGCTTTAGAAATTGCTAGAATGGAGGATAAGTCCAGACTGGGGAAGCCAGTAA AGATAATGAACTTAGAACATATCGTGAAATCAGAAAAGGAGGCTATTGAAGTGGCATGAT AGGCACAGTCCCTGCAGCCTTCTCTTGAGTCTTGACTACTCCGTACATTCGTGGTTCTGC AAAGTTGCACGTTAACCCTGCAAAAGCAAGAATCGTGTTGTCCCCAGGAACTCCAGCTGG TTCTTCAAAGGAGGTATGGTTGGCGAGCTTGCATTTCTGAAGAGGGTTCTCTGGATAAAA GAGGCGGATGAACATCATTATCCATGCAAGAATTGACCTGGCATAAATTTTCAGCGGTAA GCTGCCGATCTGGCAGGAAATCACACGAAGGGTCTCGGAATTCCACTCATGAGCCAAAGC GTCTAGAACTCTAGATCCGATCGTCAGTTAAGCATTACAGTATCCTCTTATAGCAGTGTA TCAGGAGATGCTCCTTTCATGCTACTACTAGTACCGGTTTTATTTACGTTGTACAAATGT TAAGGTTATTGTAGGCGAACATCGAATGGTAGAATTTCTACCATTCTGATCATATGTTTT ATC