Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0174200-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:3974957:3977413:1 gene:Os03g0174200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0174200-01)
Sequence

ATGGAGTCGATGGAGCCCAAGGACATCGACTGGAGCAGGGTGGTGTCGCGGTACGTGCGC
GACGAGACCTACGAGGGCATCGAGGCCCCGCACTGGGCCGACCTCACCGATCCCGAGGCC
GGCGTCGCCGCCGTCGACGACGAGGCCTGGTTCTGCCGCCCCGATTGCCGGCATCCAAAG
ACGGTCGAGGACTTCCTCAAGATGAGCCCCAGCCCCAAGGGCAAGCTACTGCGATCAGTG
TCGGCCATGATGATGCCGTTCGGCGAGAGGGACACCAACCTTAGAGACGGCAACAACAAT
CTCAAGAGGCGGGGAGCCGTCGCCGGCAGCGGCATCGCCGCCACCTTCACGCCGCCCAAG
CCCAAGGCTGCGGCCAAGAAGAGGTTCCAGGACGACAGCGAGAACCAGGACCCGGCATTG
GCCACTCCACCTCCGCCGCCACCGGCGGCGAGTAGGCCACCGTTCGGCGCGGCACGGTGG
GCCAAGAACGCCAAGGACGCCATCAAGTCCAGCGCGGAGAAGCGGCCGGGCAATGCAGAG
AAGGAGGCCCTGCTCAGCAAGAACGCCGCGCCGAGGCAGCTCAAGAGCACCCTCTCGGCG
AGGAACCTCTTCTCCGGGAAGGACATACTTGGCCAGATATCAGACTTCTACAATGAGCTC
AAGCGGATGGCCGGCGGCAATGGCAGCCGGCCTGGGTCGGAGGCCATGGAGGAATTAAGC
TCAAACCCAATAAATGAGGGCGATGTGGCCGAGAAGAAGGTCGATTGTGGCTGTGGCACT
GGTGATCAGGTTCCCTCTGAAGAAGCCATCAAGGAGAAATCAAGGCAAGAAACAGCAGAA
AAGAGTCCAAGCACAATGAAGGGGAAGAAGATGGGATTGAAAGTGGAAGCTGCGAAGCCC
ACCAGGTCCTCTGTGTTGAAGGAGGTGAAGGCCACACCACCGACTCCGCAGCGGTTCCCA
TCTCCCTCGACGAACCGTGTCAAGAACGTGAAAGCAGGAGGCATGTCGATGGCAAGCTCA
CCACTCAAGAAGCCACTGAAGGAGAAGGGGACACCTAGTAAGGATCTGGAGAACAGCAAA
GATGCTAAGAGGCAACCTTTTGGTGTCAAGGACATGAACAACACCAAGGCTTGTGATGCA
GAAGGCTCTAGTAGCATGTTTTGGTTCTTGAAGCCCTGCACCTTCCTAGTGGAGTAG

Peptide Sequence

PEP ID

Os03t0174200-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:3974957:3977413:1 gene:Os03g0174200 transcript:Os03t0174200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0174200-01)
Sequence

MESMEPKDIDWSRVVSRYVRDETYEGIEAPHWADLTDPEAGVAAVDDEAWFCRPDCRHPK
TVEDFLKMSPSPKGKLLRSVSAMMMPFGERDTNLRDGNNNLKRRGAVAGSGIAATFTPPK
PKAAAKKRFQDDSENQDPALATPPPPPPAASRPPFGAARWAKNAKDAIKSSAEKRPGNAE
KEALLSKNAAPRQLKSTLSARNLFSGKDILGQISDFYNELKRMAGGNGSRPGSEAMEELS
SNPINEGDVAEKKVDCGCGTGDQVPSEEAIKEKSRQETAEKSPSTMKGKKMGLKVEAAKP
TRSSVLKEVKATPPTPQRFPSPSTNRVKNVKAGGMSMASSPLKKPLKEKGTPSKDLENSK
DAKRQPFGVKDMNNTKACDAEGSSSMFWFLKPCTFLVE

Transcript Sequence

Transcript ID

Os03t0174200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3974957:3977413:1 gene:Os03g0174200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0174200-01)
Sequence

AGCGCTCCACAACTCACGAGACGAGGCAGAGGCGCTCGCCGCGGAGGAGCCACCACCACC
CACCGCCGCCGCCGCCACCGCAAACTCTCTTTCTTCTCTCGCCTGGACGAGCCGCCGGAG
AGCTCGGGGGAGAGCTCTGCTGCTTGGGGAGGGGAGGCGGAGGCGATGGAGTCGATGGAG
CCCAAGGACATCGACTGGAGCAGGGTGGTGTCGCGGTACGTGCGCGACGAGACCTACGAG
GGCATCGAGGCCCCGCACTGGGCCGACCTCACCGATCCCGAGGCCGGCGTCGCCGCCGTC
GACGACGAGGCCTGGTTCTGCCGCCCCGATTGCCGGCATCCAAAGACGGTCGAGGACTTC
CTCAAGATGAGCCCCAGCCCCAAGGGCAAGCTACTGCGATCAGTGTCGGCCATGATGATG
CCGTTCGGCGAGAGGGACACCAACCTTAGAGACGGCAACAACAATCTCAAGAGGCGGGGA
GCCGTCGCCGGCAGCGGCATCGCCGCCACCTTCACGCCGCCCAAGCCCAAGGCTGCGGCC
AAGAAGAGGTTCCAGGACGACAGCGAGAACCAGGACCCGGCATTGGCCACTCCACCTCCG
CCGCCACCGGCGGCGAGTAGGCCACCGTTCGGCGCGGCACGGTGGGCCAAGAACGCCAAG
GACGCCATCAAGTCCAGCGCGGAGAAGCGGCCGGGCAATGCAGAGAAGGAGGCCCTGCTC
AGCAAGAACGCCGCGCCGAGGCAGCTCAAGAGCACCCTCTCGGCGAGGAACCTCTTCTCC
GGGAAGGACATACTTGGCCAGATATCAGACTTCTACAATGAGCTCAAGCGGATGGCCGGC
GGCAATGGCAGCCGGCCTGGGTCGGAGGCCATGGAGGAATTAAGCTCAAACCCAATAAAT
GAGGGCGATGTGGCCGAGAAGAAGGTCGATTGTGGCTGTGGCACTGGTGATCAGGTTCCC
TCTGAAGAAGCCATCAAGGAGAAATCAAGGCAAGAAACAGCAGAAAAGAGTCCAAGCACA
ATGAAGGGGAAGAAGATGGGATTGAAAGTGGAAGCTGCGAAGCCCACCAGGTCCTCTGTG
TTGAAGGAGGTGAAGGCCACACCACCGACTCCGCAGCGGTTCCCATCTCCCTCGACGAAC
CGTGTCAAGAACGTGAAAGCAGGAGGCATGTCGATGGCAAGCTCACCACTCAAGAAGCCA
CTGAAGGAGAAGGGGACACCTAGTAAGGATCTGGAGAACAGCAAAGATGCTAAGAGGCAA
CCTTTTGGTGTCAAGGACATGAACAACACCAAGGCTTGTGATGCAGAAGGCTCTAGTAGC
ATGTTTTGGTTCTTGAAGCCCTGCACCTTCCTAGTGGAGTAGCAGCAAAATAACGGGAAG
CTTTAAAGAACTGCATTTTATGTAGTTAGAATACATTATTTCATTCTATTTGAGATACCT
GTTTGGTTGATTCATTTGATGGACATTTTTGTCAGGGAAATAAACAGCAAGCTATGTATA
GTTACTAGCAAAGTCATTCAAGTTTGAGAGATTCTTTCCATATGTGGGGTTCGAGATATA
GCAAAATGTTGTTGTTCTTTATGCTGCCTAACTGTTTGGCCGGAGATCTGCCATTTTCC