Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0173700-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:3936681:3940785:-1 gene:Os03g0173700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os03t0173700-01);Domain of unknown function DUF1618 domain containing protein. (Os03t0173700-02)
Sequence	ATGTCCCGAAGAATCATGAATCGCGAATCCTTCAATCCCCCCTCCCTACCCAATCTCGCC GCCTCCCGCTGCTGGCCGGAGTCGGTAATTCTGGCTAACCGGGCGTACATCGCCGACTGC AAGAACCCTACAACCGCAACAGCGCAGTCAAGAGATGGTCACACCGTGCAAATCTCTTTC TGCTTCGCCGAGGCGCCTGTGATCTCATATTTCTGTGCGCACTGCTACAATCCCAGGGTT AAGGTTGAGTTCTTCACCGAGCCCATCATAGTGGCCGGGGAAGGTGCTTTTGTCGTCCTC CGCGTTCACTTATCCTCGCCGTTGCTCTCTGAATTCTTCATCTACAGGGCGGGTCCAGGG TTGCCATCACTAGAGCGGGTTCAAGATCCCACAGGTTATAATTCTCCTATCTTTTACCTT TCTTTGCTAGGCATAGCATCTTGTGACAATGATGATGGGGGAAGCTGTTTACTTGTTGGT TTTCGCAACCGTTTGACCCACTATGAAGTTTACGTCTACACTTCCACCACCAAGACTTGG AGCACGAGAAAGTTGGATCTGTCTCCTGGAATTAGGGCTATTCGACCTCAAAAGGTGATC AATCTTGGGAGGGGTCTACTAGGTTGGGTTGATCTTTGGCATGGAATTTTAATTTTCAAT GCACGTGATGAACAACCTCAGATTCAGTATGTCCCGTTGCCTGAGCCCATGCCACTCAAC AAGGAAAGTTTTCGCCCATCCAATCGCTCGGAAAGCTGCCCTATGTTGTTTCGGGATGTC ATTTGTAGCAGCAGCGGTGAGATCAAGTTTGTTGAGTTGGAACAACGACAGAGGAAAATA CAACCTATTCCTCAAGAGCTAGAAGATGTCCGTCAAGAATCTAAAGAAGATGTTTGTGAC AGGGATGTTTTAGATGATTCATACCTGATGTCATGTGCACACATGGACGATTTGCCCAAA GAGGAGACACCATCCTTTGTTGGTGATGGTTGGAGGGCAGTGACTTGGAGTAGATTAATT TCGTCAAATTGCTGGCAGAAAGGTTACGTGATTGACAGTGATGACATGCAATCAACATAT GAGGTGTTGACATCTACACAAAGAGACAAAGGTGTTGAGATGTTAAGATTCAGGGATCTC TTCTCAGTTTTTCCCACCCTGAGCCTGAATGGTGCTGGTGATCTTCTTTACCTCAAGAGC ACTGTGAAATTTAAAGATTTAAATGGTTGGGTGTCTTCCATTGACATTGGAAAAAAGACA ATAAAAGTTCTCAAACCGTATTGTAATGGAAGGCATATCCCATTTGTGCAGATGTTCCGG TCTTGTGTATTATGCCACCATCTGACAGTGCTACCTGGTCCTGAAAACATAGGTCGGTTC ATCGAAACAAGCAGTAATGAGAATCATCCAAAAACTATAGCAGCTAGCATTATGCCTGAG TCTAACTGTTTGGCTGGAAACAAAAGGTCAAGATCAGCCACGAGATGGTCTCCTGCACTT CGTGGCTGGCCTTCTGCGAGAGTTGCCAAACCAGCTCTGAGTTGGAGGTCATGCCCACCA TCACTTTCTCCAGTTTCGTCGACTTATGGCCTTAGAAACACAGCTGGTTACCATATGGCA CAAACATGTTGCTTTGAAAATGATCCCCGTGCAACTGCGAACACAACCCCGAGGCATCCT GAGAATCAATTCACTCAGCATGGATATGAGCAGCGGGAAAATGATTTCATTTTGTCTGCA CCCAACTTTGTTCGCTGGCATAGGCCGCCATTCTCTGCTGGTGGAACTCTGCCTCCACCT CCCCCAACGCAGCAGCCCTCAGCTTTTGGTACTCTGCCTCCGCCACGCCCATCGCAGCAG TTTTCTGCATGTGGTACCATGCTTCCGCCATCCTCATCGCAGCCATTCTGTCCTTCGGTT CGATCGCTCGCAATGCAGACGTTCGCTACTCCTGGTCCAATTCTGCCTGGACCTCCTGTT ACTCCAATGCAGTGGCCTGTTTTTATTTCTCCTCCACAGCAGCAGCTTTCTGCCTGTGCT GTATGGCCGCAGGCAGGTACCCTGCAGCAGGAACTGCCACCCCATATCCCGTTCAGAGCT CATCAGTGCCCGTGA

Peptide Sequence

PEP ID	Os03t0173700-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:3936681:3940785:-1 gene:Os03g0173700 transcript:Os03t0173700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os03t0173700-01);Domain of unknown function DUF1618 domain containing protein. (Os03t0173700-02)
Sequence	MSRRIMNRESFNPPSLPNLAASRCWPESVILANRAYIADCKNPTTATAQSRDGHTVQISF CFAEAPVISYFCAHCYNPRVKVEFFTEPIIVAGEGAFVVLRVHLSSPLLSEFFIYRAGPG LPSLERVQDPTGYNSPIFYLSLLGIASCDNDDGGSCLLVGFRNRLTHYEVYVYTSTTKTW STRKLDLSPGIRAIRPQKVINLGRGLLGWVDLWHGILIFNARDEQPQIQYVPLPEPMPLN KESFRPSNRSESCPMLFRDVICSSSGEIKFVELEQRQRKIQPIPQELEDVRQESKEDVCD RDVLDDSYLMSCAHMDDLPKEETPSFVGDGWRAVTWSRLISSNCWQKGYVIDSDDMQSTY EVLTSTQRDKGVEMLRFRDLFSVFPTLSLNGAGDLLYLKSTVKFKDLNGWVSSIDIGKKT IKVLKPYCNGRHIPFVQMFRSCVLCHHLTVLPGPENIGRFIETSSNENHPKTIAASIMPE SNCLAGNKRSRSATRWSPALRGWPSARVAKPALSWRSCPPSLSPVSSTYGLRNTAGYHMA QTCCFENDPRATANTTPRHPENQFTQHGYEQRENDFILSAPNFVRWHRPPFSAGGTLPPP PPTQQPSAFGTLPPPRPSQQFSACGTMLPPSSSQPFCPSVRSLAMQTFATPGPILPGPPV TPMQWPVFISPPQQQLSACAVWPQAGTLQQELPPHIPFRAHQCP

Transcript Sequence

Transcript ID	Os03t0173700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3936681:3940785:-1 gene:Os03g0173700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF1618 domain containing protein. (Os03t0173700-01);Domain of unknown function DUF1618 domain containing protein. (Os03t0173700-02)
Sequence	AGCCACCGGCATCGGCACCCCCGATCGCGACCACCCCGCCGCCGAACGCCGCCGCTGCCG CCGCCGCCTCTCTCCGCCACCGCCCCAGCTCGCCGCCCCACCGTCGAGCGCCACCAACCC GCCGCCACCGTGCGCCACTTCCACGAGAGGAAAAAGGAAACCCTAATTTCCAAATCCACC GCTTCTTCCGACAATGTCCCGAAGAATCATGAATCGCGAATCCTTCAATCCCCCCTCCCT ACCCAATCTCGCCGCCTCCCGCTGCTGGCCGGAGTCGGTAATTCTGGCTAACCGGGCGTA CATCGCCGACTGCAAGAACCCTACAACCGCAACAGCGCAGTCAAGAGATGGTCACACCGT GCAAATCTCTTTCTGCTTCGCCGAGGCGCCTGTGATCTCATATTTCTGTGCGCACTGCTA CAATCCCAGGGTTAAGGTTGAGTTCTTCACCGAGCCCATCATAGTGGCCGGGGAAGGTGC TTTTGTCGTCCTCCGCGTTCACTTATCCTCGCCGTTGCTCTCTGAATTCTTCATCTACAG GGCGGGTCCAGGGTTGCCATCACTAGAGCGGGTTCAAGATCCCACAGGTTATAATTCTCC TATCTTTTACCTTTCTTTGCTAGGCATAGCATCTTGTGACAATGATGATGGGGGAAGCTG TTTACTTGTTGGTTTTCGCAACCGTTTGACCCACTATGAAGTTTACGTCTACACTTCCAC CACCAAGACTTGGAGCACGAGAAAGTTGGATCTGTCTCCTGGAATTAGGGCTATTCGACC TCAAAAGGTGATCAATCTTGGGAGGGGTCTACTAGGTTGGGTTGATCTTTGGCATGGAAT TTTAATTTTCAATGCACGTGATGAACAACCTCAGATTCAGTATGTCCCGTTGCCTGAGCC CATGCCACTCAACAAGGAAAGTTTTCGCCCATCCAATCGCTCGGAAAGCTGCCCTATGTT GTTTCGGGATGTCATTTGTAGCAGCAGCGGTGAGATCAAGTTTGTTGAGTTGGAACAACG ACAGAGGAAAATACAACCTATTCCTCAAGAGCTAGAAGATGTCCGTCAAGAATCTAAAGA AGATGTTTGTGACAGGGATGTTTTAGATGATTCATACCTGATGTCATGTGCACACATGGA CGATTTGCCCAAAGAGGAGACACCATCCTTTGTTGGTGATGGTTGGAGGGCAGTGACTTG GAGTAGATTAATTTCGTCAAATTGCTGGCAGAAAGGTTACGTGATTGACAGTGATGACAT GCAATCAACATATGAGGTGTTGACATCTACACAAAGAGACAAAGGTGTTGAGATGTTAAG ATTCAGGGATCTCTTCTCAGTTTTTCCCACCCTGAGCCTGAATGGTGCTGGTGATCTTCT TTACCTCAAGAGCACTGTGAAATTTAAAGATTTAAATGGTTGGGTGTCTTCCATTGACAT TGGAAAAAAGACAATAAAAGTTCTCAAACCGTATTGTAATGGAAGGCATATCCCATTTGT GCAGATGTTCCGGTCTTGTGTATTATGCCACCATCTGACAGTGCTACCTGGTCCTGAAAA CATAGGTCGGTTCATCGAAACAAGCAGTAATGAGAATCATCCAAAAACTATAGCAGCTAG CATTATGCCTGAGTCTAACTGTTTGGCTGGAAACAAAAGGTCAAGATCAGCCACGAGATG GTCTCCTGCACTTCGTGGCTGGCCTTCTGCGAGAGTTGCCAAACCAGCTCTGAGTTGGAG GTCATGCCCACCATCACTTTCTCCAGTTTCGTCGACTTATGGCCTTAGAAACACAGCTGG TTACCATATGGCACAAACATGTTGCTTTGAAAATGATCCCCGTGCAACTGCGAACACAAC CCCGAGGCATCCTGAGAATCAATTCACTCAGCATGGATATGAGCAGCGGGAAAATGATTT CATTTTGTCTGCACCCAACTTTGTTCGCTGGCATAGGCCGCCATTCTCTGCTGGTGGAAC TCTGCCTCCACCTCCCCCAACGCAGCAGCCCTCAGCTTTTGGTACTCTGCCTCCGCCACG CCCATCGCAGCAGTTTTCTGCATGTGGTACCATGCTTCCGCCATCCTCATCGCAGCCATT CTGTCCTTCGGTTCGATCGCTCGCAATGCAGACGTTCGCTACTCCTGGTCCAATTCTGCC TGGACCTCCTGTTACTCCAATGCAGTGGCCTGTTTTTATTTCTCCTCCACAGCAGCAGCT TTCTGCCTGTGCTGTATGGCCGCAGGCAGGTACCCTGCAGCAGGAACTGCCACCCCATAT CCCGTTCAGAGCTCATCAGTGCCCGTGATGATCCTATTCTTAATGAAGCTGGTTGAATAG ACGGGCATCTTCTCATTGCAGGAGAAAATCTTCTCGTGGACCTTAGTTACTTTATTTGTT AAATCCAGAATTCAGTCCGTCTTGTGATAACTATTGATATACGAACCTTTCTACGTGGAC CATTGCTGATGTGTTCTTGCTTATCATGAGTTCTGTGATGTTGTGT