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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0172850-00
CDS Infomation

cds chromosome:IRGSP-1.0:3:3893027:3893580:-1 gene:Os03g0172850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteinase inhibitor I25, cystatin, conserved region domain containing protein. (Os03t0172850-00)
Sequence

ATGCACAAATCCACCGCGCCATCCACGTCGGCAATGGCTTCCGATGGCGGCAGCTCATTG
CTCTTTTTCGCGAGCTATAAGTATCAAGGCCAGAGCAGAGCAGAGCAAAGACCAAAACCG
CAAGCAGAGCCTGTGATCCAGTGGGCACTGAGCACCAGCAAGATCGTCGCCATGAGGACG
TCGTCGTCGCTGCTCGTTGCCGCCGCTCTCGTTTTCGTCGTCGTCGTCGCCGAGACGCTC
CCGGCGGCGGAGGCGACGTACAGGCCGATCGGCAACACCAGCAACCTGGTGATCCTGCAG
GTGGGCCGCTTCTCGGTGCTCGTCTACGACCTGTCGCACCGCAAGAGCCTGGTGTTCGTC
TCCGTCGTCAGCGGCGAGACCGAGGCGGCGGTGGGCGGCGGCACCAACTACCGCCTCGTG
ATCTTGGCGGAGACGACGCCCGGCGGGAGCAAGGCCAAGTTCCAGTGCGTCGTCTGGGGC
GTGCCCGGCTCTCGCGCCAACACCTGGAAGCTGCTCAGCTTCAAGGCGATCTAG

Peptide Sequence

PEP ID

Os03t0172850-00
PEP Infomation

pep chromosome:IRGSP-1.0:3:3893027:3893580:-1 gene:Os03g0172850 transcript:Os03t0172850-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteinase inhibitor I25, cystatin, conserved region domain containing protein. (Os03t0172850-00)
Sequence

MHKSTAPSTSAMASDGGSSLLFFASYKYQGQSRAEQRPKPQAEPVIQWALSTSKIVAMRT
SSSLLVAAALVFVVVVAETLPAAEATYRPIGNTSNLVILQVGRFSVLVYDLSHRKSLVFV
SVVSGETEAAVGGGTNYRLVILAETTPGGSKAKFQCVVWGVPGSRANTWKLLSFKAI

Transcript Sequence

Transcript ID

Os03t0172850-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3893027:3893580:-1 gene:Os03g0172850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteinase inhibitor I25, cystatin, conserved region domain containing protein. (Os03t0172850-00)
Sequence

ATGCACAAATCCACCGCGCCATCCACGTCGGCAATGGCTTCCGATGGCGGCAGCTCATTG
CTCTTTTTCGCGAGCTATAAGTATCAAGGCCAGAGCAGAGCAGAGCAAAGACCAAAACCG
CAAGCAGAGCCTGTGATCCAGTGGGCACTGAGCACCAGCAAGATCGTCGCCATGAGGACG
TCGTCGTCGCTGCTCGTTGCCGCCGCTCTCGTTTTCGTCGTCGTCGTCGCCGAGACGCTC
CCGGCGGCGGAGGCGACGTACAGGCCGATCGGCAACACCAGCAACCTGGTGATCCTGCAG
GTGGGCCGCTTCTCGGTGCTCGTCTACGACCTGTCGCACCGCAAGAGCCTGGTGTTCGTC
TCCGTCGTCAGCGGCGAGACCGAGGCGGCGGTGGGCGGCGGCACCAACTACCGCCTCGTG
ATCTTGGCGGAGACGACGCCCGGCGGGAGCAAGGCCAAGTTCCAGTGCGTCGTCTGGGGC
GTGCCCGGCTCTCGCGCCAACACCTGGAAGCTGCTCAGCTTCAAGGCGATCTAGACGTGT
ACGGCGATCTAGCT