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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os03t0172700-01
CDS Infomation

cds chromosome:IRGSP-1.0:3:3889565:3890307:-1 gene:Os03g0172700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0172700-01)
Sequence

ATGGCCAGATCGTCGCCGCTGTTCCTGCTGGGAGCCGCGCTCGCCGTGGTCGCGGTGGCG
GCGGCGACGCTCCCGGCAGCGACGGAGGCCGCCGGGTGGGCGCCGGTGGCGGACGTGCAG
GAGCTGGTGATCCAGCAGGTGGGGCGGTTCGCGGTGCTGGTGTACAGCCTCGCGCACCAC
ACGGACCTGGCCTACGTGGGCGTGGCGCGCGGCGAGACGGAGGCGGCGGCGGGCGGCGCC
GGCGGCACCAATTACCGGCTGGCCGTCGCCGTCACCAAGCCCGACGGGAGCGCCGCGCAG
TACGAGTGCCTGGTGTGGGGCGTGCCCGGCTCCCGCCTCGACACGTGGAAGCTCCGCAGG
TTCAGGAGGATACAGTTGCCCTGA

Peptide Sequence

PEP ID

Os03t0172700-01
PEP Infomation

pep chromosome:IRGSP-1.0:3:3889565:3890307:-1 gene:Os03g0172700 transcript:Os03t0172700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0172700-01)
Sequence

MARSSPLFLLGAALAVVAVAAATLPAATEAAGWAPVADVQELVIQQVGRFAVLVYSLAHH
TDLAYVGVARGETEAAAGGAGGTNYRLAVAVTKPDGSAAQYECLVWGVPGSRLDTWKLRR
FRRIQLP

Transcript Sequence

Transcript ID

Os03t0172700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:3:3889565:3890307:-1 gene:Os03g0172700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os03t0172700-01)
Sequence

ACATCTCCCTACAAATACATATGCAAGCATCGCTCAAGCACTGATCGATCGCAATGGCCA
GATCGTCGCCGCTGTTCCTGCTGGGAGCCGCGCTCGCCGTGGTCGCGGTGGCGGCGGCGA
CGCTCCCGGCAGCGACGGAGGCCGCCGGGTGGGCGCCGGTGGCGGACGTGCAGGAGCTGG
TGATCCAGCAGGTGGGGCGGTTCGCGGTGCTGGTGTACAGCCTCGCGCACCACACGGACC
TGGCCTACGTGGGCGTGGCGCGCGGCGAGACGGAGGCGGCGGCGGGCGGCGCCGGCGGCA
CCAATTACCGGCTGGCCGTCGCCGTCACCAAGCCCGACGGGAGCGCCGCGCAGTACGAGT
GCCTGGTGTGGGGCGTGCCCGGCTCCCGCCTCGACACGTGGAAGCTCCGCAGGTTCAGGA
GGATACAGTTGCCCTGAAGTACGTACGCTGTACACACGACCCGATCGATCGAACGACATG
CCAAACTCAAATACTCAATACATACAACCCATTACGACCTCATTATACATCGATATCGGT
TAATTCAAGCTTGGATGAGCCGAAATTAAACTGTACTAGTAGCTAGCATGATCGTGCTCT
CTTTTCATTCATGTTCCGGTGTTCGTGGCCATTTCTCGCACAAGAGGTGGGCATGCAATA
AGGTTTCTCCTTTGTCAGGAGGTCACATATATTTTTTAGTAGTATCATTTTCACACTCGA
GTTATATATTTGCATAATGAACT