Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0172200-01
CDS Infomation	cds chromosome:IRGSP-1.0:3:3867253:3871354:-1 gene:Os03g0172200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mo25-like domain containing protein. (Os03t0172200-01)
Sequence	ATGGCGGGGTGCCTGTGGCCGTGCGTGACCGGCGGCGGCGCGGCGGCGGACGGGGCGGGG AGCCTGTTCCGGTCGAAGGCGAGGGGCCCCGTGGAGGTGGTGCGGCACGCGCGGGAGCTC CTCGCCTTCCTCGCCGAGAACCACGACGCGTGCGGTGACAAGCGCGACGTCAAACGCGAA CACAAGATGGTAGATCTAGCCAAAAGCATCGGGGAGATGAAATCCATCCTTTATGGAAAT GGCGAGGCAGACCCAGTCGATGAAGCTTGCTCGCAGTTGACGAAGGAGTTCTTCAAGGAG AATACCAATAGTCTTCATCTACTAGTTGTTTGCCTTCCATACATGGACCTGGAAACTCAG AAGGATGTCACTCAAGTTACTGCGAATTTGCTAAGGCAAAAGGTAGATTATAGGATGGTT GCCTCTGATTATTTGGAAGAAAACCAGGATCTTTTGGATGTTCTAATGTCTGGGTATGAC AACATGGACATTGCAATACATTATAGTGCAATTCTAAGGGACTGCATACGGCACCAAGTC GCTGCAAGGTATGTATTAGAGTCTCAGCATATGAAGAAATTTTTTGATTATATACAATAT CCAGACTTCAACATAGCATCTGATGCCTTCAAGACCTTTAAGGAACTCCTCACAAGGCAT AGATCAAGTGCTGCTGAGTTCTTTTCAAATAATTACGATTGGTTTTTTCCGGAATTTAAC TCAAAATTGCTGTCATCATCCAACTATATCATTCGAAGGCAAGCCACTCAGCTACTAGGA GACATTCTTCTGGATAAGTCAAACACAACAGCAATGGTGCGCTATGTTAGCTCAAAGGAT AACCTCATAATACTAATGAACCTTTTAAGGGAGCAAAGCAGGGCCATTCAAGTTGAGGCT TTTCGCGTTTTCAAGCTGTTCACTTGCAATCCGAAGAAGCCACCTGAGATCGTGGGTATA CTGGTGACAAACAAGAGCAAAATCCTCAGGTTCTTGGCAGATTTCACAATAGAAAAAGAG GATCAGCAGTTCGAGGCCGACAAAGCCCAGGTTGTCACCGAGATATCGGCCATGTGA

Peptide Sequence

PEP ID	Os03t0172200-01
PEP Infomation	pep chromosome:IRGSP-1.0:3:3867253:3871354:-1 gene:Os03g0172200 transcript:Os03t0172200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mo25-like domain containing protein. (Os03t0172200-01)
Sequence	MAGCLWPCVTGGGAAADGAGSLFRSKARGPVEVVRHARELLAFLAENHDACGDKRDVKRE HKMVDLAKSIGEMKSILYGNGEADPVDEACSQLTKEFFKENTNSLHLLVVCLPYMDLETQ KDVTQVTANLLRQKVDYRMVASDYLEENQDLLDVLMSGYDNMDIAIHYSAILRDCIRHQV AARYVLESQHMKKFFDYIQYPDFNIASDAFKTFKELLTRHRSSAAEFFSNNYDWFFPEFN SKLLSSSNYIIRRQATQLLGDILLDKSNTTAMVRYVSSKDNLIILMNLLREQSRAIQVEA FRVFKLFTCNPKKPPEIVGILVTNKSKILRFLADFTIEKEDQQFEADKAQVVTEISAM

Transcript Sequence

Transcript ID	Os03t0172200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3867253:3871354:-1 gene:Os03g0172200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mo25-like domain containing protein. (Os03t0172200-01)
Sequence	AGCGCACGCACACACGAACGGCCGAGCACGCGGCCGCCGGCGCCGGCGCATCGGCGGCGG CGTACGTGCGAGGAAGAAGGCCGGCCACCATACCGATCACCATTGTAGCGCCGCAGGAGG TGATAATCTGGGTCGTCGTCGTCGTCACTGCCGACGTACGGCGCCTAGCACCGGCTGCTG GGCGAGCGAGCTCGACCGCGTTCGCGTGAATTAATGGCGGGGTGCCTGTGGCCGTGCGTG ACCGGCGGCGGCGCGGCGGCGGACGGGGCGGGGAGCCTGTTCCGGTCGAAGGCGAGGGGC CCCGTGGAGGTGGTGCGGCACGCGCGGGAGCTCCTCGCCTTCCTCGCCGAGAACCACGAC GCGTGCGGTGACAAGCGCGACGTCAAACGCGAACACAAGATGGTAGATCTAGCCAAAAGC ATCGGGGAGATGAAATCCATCCTTTATGGAAATGGCGAGGCAGACCCAGTCGATGAAGCT TGCTCGCAGTTGACGAAGGAGTTCTTCAAGGAGAATACCAATAGTCTTCATCTACTAGTT GTTTGCCTTCCATACATGGACCTGGAAACTCAGAAGGATGTCACTCAAGTTACTGCGAAT TTGCTAAGGCAAAAGGTAGATTATAGGATGGTTGCCTCTGATTATTTGGAAGAAAACCAG GATCTTTTGGATGTTCTAATGTCTGGGTATGACAACATGGACATTGCAATACATTATAGT GCAATTCTAAGGGACTGCATACGGCACCAAGTCGCTGCAAGGTATGTATTAGAGTCTCAG CATATGAAGAAATTTTTTGATTATATACAATATCCAGACTTCAACATAGCATCTGATGCC TTCAAGACCTTTAAGGAACTCCTCACAAGGCATAGATCAAGTGCTGCTGAGTTCTTTTCA AATAATTACGATTGGTTTTTTCCGGAATTTAACTCAAAATTGCTGTCATCATCCAACTAT ATCATTCGAAGGCAAGCCACTCAGCTACTAGGAGACATTCTTCTGGATAAGTCAAACACA ACAGCAATGGTGCGCTATGTTAGCTCAAAGGATAACCTCATAATACTAATGAACCTTTTA AGGGAGCAAAGCAGGGCCATTCAAGTTGAGGCTTTTCGCGTTTTCAAGCTGTTCACTTGC AATCCGAAGAAGCCACCTGAGATCGTGGGTATACTGGTGACAAACAAGAGCAAAATCCTC AGGTTCTTGGCAGATTTCACAATAGAAAAAGAGGATCAGCAGTTCGAGGCCGACAAAGCC CAGGTTGTCACCGAGATATCGGCCATGTGATCAAACAACCGGAGAAAGCGTTGATATCCA CAGAGAGTGGAGTTCCTCTTGTTTTCGTTTTCTTCATCATAATCTAACCAAATGGAAAGG AAATCAAGCTGATTCTACTGCTACGATGCTTGTGGTTTGGGCCACTTGTCCATTGAACTT GTAACTGGGCCGTTTGCTTGATAGCCTCTACTACTACTAATGTGTGCGCCCTTCCTCTCA AAAAGGAAAAAAAAAGAGAATTTTG