Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0172000-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:3860925:3864548:1 gene:Os03g0172000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MODIFIER OF SNC1, 3/SUPPRESSOR OF AUXIN RESISTANCE 3, MODIFIER OF SNC1, 3, SUPPRESSOR OF AUXIN RESISTANCE 3, Nucleoporin Autopeptidase 1, nucleoporin 96 description:Peptidase S59, nucleoporin family protein. (Os03t0172000-01);Similar to predicted protein. (Os03t0172000-02)
Sequence	GGTCTATCTTCTGTTATTCACATAGAGAAAGTTGCAGGCGACAAAGTTGTACGTGATGAG AAGAACAAAATTAAGGAGGAGCTGACTGATCTGTGCTTCTCAGACCCGCTGGATCTCCAT AGGAGGCTTCATCATGAATATCTGGAGACTGAGTCTGACTTGTTTAAATTGAAGCTTCAG AAGGTTGTGGCAAGTCGCTTTGTGTTGCCAGATATTTGCAGATCTTATATTGACATCATT GAAAGGCAGCTTGAAGTCAGTGATTTATCTATGTCTTCTCGTGTGCTGTTAATGCACCAG GTTACAGTTTGGGAGCTTATTCGGGTCTTGTTCTCAGAAAGAGCAACTGGTAACCAGTTA GAGCCTACTGGTGATGAGGACCAGGAGGGGATGATTTTAGATAAGAAAGAAGGTACTGTT GCCATAGACCTTGAAGCACTCCCTTTGGTTAGAAGAGCAGACTTTAGCAATTGGTTACAG GACAGTGTTTGTCATCGGGTTCAAGGAGAGGCGGGCTCCTTAAATGATGCCAGGTATCTG GAACATATTATTCTGCTTTTGACTGGTCGGCAATTAGACACAGCCACAGAAGTTGCTGCC TTTAGGGGTGATGTTCGACTGGCAATTTTGCTAAGCCAGGCAGGTGGGTCAATGCTAAAT CGTTCTGACCTTTCTCAGCAACTGGATCTATGGAAAACAAATGGTCTGGATTTTGATTAT ATTCAGGAAGACAGGTTAAAGATATATGAGTTGCTTTCTGGTAATGTACAAGGCGCGTTG GTAGATTCATCAATTGACTGGAAACGGTACCTTGGTTTAATAATGTGGTATCAACTATCA CCTGATGCATCACTTGATATTATCATTCACTCTTATCACCAGCTCCTTGGTGAGGGCAAA GTCCCATATCCTGTACCTGTATATATAGATGAAGGACCCCTTGATGAGTCACTTCAATGG TCCCCAGGTGACCGCTTTGACATATCCTTTTATCTAATGCTGCTTCATGCAAATCAAGAC GAGAAGTTTGGGATGCTAAAAACTATGTTCAGTGCATTCTCATCTTCATATGATCCCTTG GACTACCATATGATCTGGCATCAGTGTTCCATTCTGGAAGCTATCGGTGCTTTCAGTTCA AATGATCTTCATGTGCTAGATTTGAGTTTTGTTTACCAATTATTGTGTCTGGGGAAGTGC CATTGGGCTATCTATGTCATTCTACATATGCCTCATCTTGATGACGCCCCATACATCCAT GAGAAGTTGATCAGGGAAATTTTGTCACAATATTGCGAATCATGGAGCAAGGATGAAACT CAGAGAGTTTATATTGCAGAACTTGGTATTCCAGTAGAATGGATGCATGACGCTCTGGCT CTTTACAATGAATACTATGGAGATCAGCAAAGCGCACTGGAGAATTATATTCTGTGTGGC AACTGGAAGAAAGCCCATACAATTTTCATGACATCCATTGCTCATTCTTTGTTTCTGTCA TCTAAGCATCAAGAGATCTGGGACATTACAAGCTCTTTGGAGGTTCACAAGTCTGAAATT GCTGACTGGGAACTTAGTGCTGGAATATACATAGACTTCTTCATTCTAAGAAATTCTATG CAAGAAAAAAGTACCATGGATGATCCAGATCAACTTGAGAAGAAAAATGAATCATGCAGC ACTTTCTTTGGCCGGTTAAATGATTCATTGATAGTCTGGGGAAGTAAATTACCTGTTGAG GCAAGGGCATGCTTCTCGAAGATGGCAGAGGAGCTGTGCGAGCTACTAATGAACTCCCCC GGCGAGGGCTTGACGCCAGATCTCTACATGGGCTGCTTTCAGACGATGCTTAACGCTCCT GTGCCCGACGACCACAGGTCATCCTACCTGCAAGAGGCGGTCTCTGTTTTCACCGACATA CTTTGCAGGGACTGA

Peptide Sequence

PEP ID	Os03t0172000-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:3860925:3864548:1 gene:Os03g0172000 transcript:Os03t0172000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MODIFIER OF SNC1, 3/SUPPRESSOR OF AUXIN RESISTANCE 3, MODIFIER OF SNC1, 3, SUPPRESSOR OF AUXIN RESISTANCE 3, Nucleoporin Autopeptidase 1, nucleoporin 96 description:Peptidase S59, nucleoporin family protein. (Os03t0172000-01);Similar to predicted protein. (Os03t0172000-02)
Sequence	GLSSVIHIEKVAGDKVVRDEKNKIKEELTDLCFSDPLDLHRRLHHEYLETESDLFKLKLQ KVVASRFVLPDICRSYIDIIERQLEVSDLSMSSRVLLMHQVTVWELIRVLFSERATGNQL EPTGDEDQEGMILDKKEGTVAIDLEALPLVRRADFSNWLQDSVCHRVQGEAGSLNDARYL EHIILLLTGRQLDTATEVAAFRGDVRLAILLSQAGGSMLNRSDLSQQLDLWKTNGLDFDY IQEDRLKIYELLSGNVQGALVDSSIDWKRYLGLIMWYQLSPDASLDIIIHSYHQLLGEGK VPYPVPVYIDEGPLDESLQWSPGDRFDISFYLMLLHANQDEKFGMLKTMFSAFSSSYDPL DYHMIWHQCSILEAIGAFSSNDLHVLDLSFVYQLLCLGKCHWAIYVILHMPHLDDAPYIH EKLIREILSQYCESWSKDETQRVYIAELGIPVEWMHDALALYNEYYGDQQSALENYILCG NWKKAHTIFMTSIAHSLFLSSKHQEIWDITSSLEVHKSEIADWELSAGIYIDFFILRNSM QEKSTMDDPDQLEKKNESCSTFFGRLNDSLIVWGSKLPVEARACFSKMAEELCELLMNSP GEGLTPDLYMGCFQTMLNAPVPDDHRSSYLQEAVSVFTDILCRD

Transcript Sequence

Transcript ID	Os03t0172000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3860925:3864548:1 gene:Os03g0172000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MODIFIER OF SNC1, 3/SUPPRESSOR OF AUXIN RESISTANCE 3, MODIFIER OF SNC1, 3, SUPPRESSOR OF AUXIN RESISTANCE 3, Nucleoporin Autopeptidase 1, nucleoporin 96 description:Peptidase S59, nucleoporin family protein. (Os03t0172000-01);Similar to predicted protein. (Os03t0172000-02)
Sequence	TGGTCTATCTTCTGTTATTCACATAGAGAAAGTTGCAGGCGACAAAGTTGTACGTGATGA GAAGAACAAAATTAAGGAGGAGCTGACTGATCTGTGCTTCTCAGACCCGCTGGATCTCCA TAGGAGGCTTCATCATGAATATCTGGAGACTGAGTCTGACTTGTTTAAATTGAAGCTTCA GAAGGTTGTGGCAAGTCGCTTTGTGTTGCCAGATATTTGCAGATCTTATATTGACATCAT TGAAAGGCAGCTTGAAGTCAGTGATTTATCTATGTCTTCTCGTGTGCTGTTAATGCACCA GGTTACAGTTTGGGAGCTTATTCGGGTCTTGTTCTCAGAAAGAGCAACTGGTAACCAGTT AGAGCCTACTGGTGATGAGGACCAGGAGGGGATGATTTTAGATAAGAAAGAAGGTACTGT TGCCATAGACCTTGAAGCACTCCCTTTGGTTAGAAGAGCAGACTTTAGCAATTGGTTACA GGACAGTGTTTGTCATCGGGTTCAAGGAGAGGCGGGCTCCTTAAATGATGCCAGGTATCT GGAACATATTATTCTGCTTTTGACTGGTCGGCAATTAGACACAGCCACAGAAGTTGCTGC CTTTAGGGGTGATGTTCGACTGGCAATTTTGCTAAGCCAGGCAGGTGGGTCAATGCTAAA TCGTTCTGACCTTTCTCAGCAACTGGATCTATGGAAAACAAATGGTCTGGATTTTGATTA TATTCAGGAAGACAGGTTAAAGATATATGAGTTGCTTTCTGGTAATGTACAAGGCGCGTT GGTAGATTCATCAATTGACTGGAAACGGTACCTTGGTTTAATAATGTGGTATCAACTATC ACCTGATGCATCACTTGATATTATCATTCACTCTTATCACCAGCTCCTTGGTGAGGGCAA AGTCCCATATCCTGTACCTGTATATATAGATGAAGGACCCCTTGATGAGTCACTTCAATG GTCCCCAGGTGACCGCTTTGACATATCCTTTTATCTAATGCTGCTTCATGCAAATCAAGA CGAGAAGTTTGGGATGCTAAAAACTATGTTCAGTGCATTCTCATCTTCATATGATCCCTT GGACTACCATATGATCTGGCATCAGTGTTCCATTCTGGAAGCTATCGGTGCTTTCAGTTC AAATGATCTTCATGTGCTAGATTTGAGTTTTGTTTACCAATTATTGTGTCTGGGGAAGTG CCATTGGGCTATCTATGTCATTCTACATATGCCTCATCTTGATGACGCCCCATACATCCA TGAGAAGTTGATCAGGGAAATTTTGTCACAATATTGCGAATCATGGAGCAAGGATGAAAC TCAGAGAGTTTATATTGCAGAACTTGGTATTCCAGTAGAATGGATGCATGACGCTCTGGC TCTTTACAATGAATACTATGGAGATCAGCAAAGCGCACTGGAGAATTATATTCTGTGTGG CAACTGGAAGAAAGCCCATACAATTTTCATGACATCCATTGCTCATTCTTTGTTTCTGTC ATCTAAGCATCAAGAGATCTGGGACATTACAAGCTCTTTGGAGGTTCACAAGTCTGAAAT TGCTGACTGGGAACTTAGTGCTGGAATATACATAGACTTCTTCATTCTAAGAAATTCTAT GCAAGAAAAAAGTACCATGGATGATCCAGATCAACTTGAGAAGAAAAATGAATCATGCAG CACTTTCTTTGGCCGGTTAAATGATTCATTGATAGTCTGGGGAAGTAAATTACCTGTTGA GGCAAGGGCATGCTTCTCGAAGATGGCAGAGGAGCTGTGCGAGCTACTAATGAACTCCCC CGGCGAGGGCTTGACGCCAGATCTCTACATGGGCTGCTTTCAGACGATGCTTAACGCTCC TGTGCCCGACGACCACAGGTCATCCTACCTGCAAGAGGCGGTCTCTGTTTTCACCGACAT ACTTTGCAGGGACTGATGCATGATTGCTTGAAGATCCATGGCATTCTATGATATCTGCAG AATTGTTGGAAGTTTCCCTGATCTATCTATTGGGTTTTAACCTATTGGTTATTCTGATCA TACACGGGATCTGGGTGCACAAGAAGCTCCCGGCTGCCAAGTCGCAAGTCAGTAATACAG TGAAGAGCTCCAAAAGTTCGTCCCTTGCCCGAGTGCAGTGAGGAAATGTAGATCAGCTAT TGATGGTGCAGATAACTGCCATGCTCATCAAACTCCTGAAGAATGTATAAGCTGTGTGCT AAGCTGTACCAATCAACTTTCAGATGTGAGCTGTACCCGTCATCTTTGTTCGTTTTTGTA CTGTAATACTGTTACAACGGAAAGCAGCAAATCGTGTACGGTGTATGTTGTGCTGAAGAG CTCGACGAAGATAAAGCATCCAGCTGGGCCCAATTCTCGGCAATACATGCACGATTCCAC CCTTCCATGGACGTGGGAGCAAGCTGCATATTTCTCTTCTTCAGTCGAGGTACTTTTTCA CAGCTTATGATGAGGTTATCCCGAAAATACTGTGGTGTACTTTTTCAGAGCTTATGGGAT TATTCCGAAAATACTGAGGTTTTACGGAGCTGTAGGCCTGTAACAATTGCAAGGGGATAT TTTTTTTTCTCATCACACGGAAAATGCACAAAGCAACAACCCCACACTTGCACACTCGTA AATTGGACTGTGTCAGTGTGGCAAAGATTTGAGAGCTTAGGTAGAATATTTCTTCTGTCG TGCACGCGATGTCGCGATGAAATGAAAAATCACAATGTTGGAGTGAGCCAAAACTGCTTT TGCAGAACC