Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os03t0171900-02
CDS Infomation	cds chromosome:IRGSP-1.0:3:3854439:3858293:1 gene:Os03g0171900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alanine:glyoxylate aminotransferase-like protein (Fragment). (Os03t0171900-01);Similar to Alanine:glyoxylate aminotransferase-like protein (Fragment). (Os03t0171900-02)
Sequence	ATGGCGGTGTCGTCGTCGTCGCTGCTGCTCCGCCGCGGAGCCACCGGCGGCGCCGGGAGA CGGTGGGGTCCGGGGGAGGCGTTGCGGAGGCTGGTGTCGTCGTCGGAGGCGGCGCCGGCG GAGAAGGTTCCGGCGCGGTCGCCGCCGGTGATGCCGCCGTTCGAGCACCGGCCCAGGCCG TACGCCGGGTGGAGCGGCGATGAGATCCTCGCGAAGAGGAAGCAGTTTCTTGGATCGTCT GTGTTCTACTACTACCAGAAGCCGCTGAACATTGTGGAAGGGAAGATGCAGTATCTGTAC GATGAGAATGGGAAGAGATACCTCGATTGCTTCGGAGGCATCGTGACAGTTTCATGCGGC CATTGCCATCCGGATATCGTGAACGCTGTGGTGGAGCAGACCAAGCTGCTCCAGCACACG ACCACCATATATTTGAATCAACCCATCGTCGAGTTTGCAGAAGCGCTCGCGTCCAAGATG CCAGGAAATCTCAAGGTGGTGTATTTTGTGAATTCTGGGACTGAAGCGAATGAACTGGCG ATGCTGATGGCTCGGCTGTACAGTGGGAATCTCAATATGATTGCATTGAGAAATGCTTAT CATGGTGGTAGTGCTGGAACAATAGGATTGACGGGTTTGCAGACGTGGAAGTACCCAATC CCTCAGGGCGAAATACATCATGTCATGAACCCTGATCCTTACCGTGGAACTTTCGGTTCT GATGCTGTAGCTTATGCCAAGGAAGTCGAAGAACAAATAAATTATGGTACCTCCGGAAGG GTTGCGGGTTTCATTGCTGAAACTTTCCAAGGCGTGGGAGGTGCAGTTGAACTAGCTCCT GGATATTTAAAGTTAGCTTATGACACTGTCCGGAAGGCTGGTGGTGTTTGTATAGCTGAT GAAGTCCAGAGTGGATTTGGTCGAACTGGAAGTCACTATTGGGGATTTCAGACGCAAGAT GTTATTCCTGACATTGTAACAATGGCAAAGGGAATTGGAAATGGTCTACCATTGGGGGCA GTTGTAACAACACCCGAGATTGCAAATGTGCTGGCGCAAAAAATCCAATTTAACACATTT GGTGGAAACCCTGTTTGCTCCGTTGGTGGACTTGCTGTGCTCAAGGTTCTTGACAAGGAG AAACGCCAGGCACATTGTGCTGATGTTGGATCTCATTTGGTGAATCGTCTAAAAGAGCTC CAGCAAAAGCATGAAATCATTGGAGATGTTAGAGGGAGGGGATTGATGCTTGGGGTGGAG CTTGTTACCGATAGGAAGGAGAAGACACCTGCCAAGGCCGAGACCAATTTATTGTTTGAG AAACTCAAGGATCTCAACATTTTAGTTGGAAAAGGTGGTCTGCATGGTAATGTCTTCAGG ATAAAACCACCAATGTGCTTTACAAGGGATGATGCAGATTACCTGGTGGATGCCATGGAC TATGCAATGTCAGGGCTCTGA

Peptide Sequence

PEP ID	Os03t0171900-02
PEP Infomation	pep chromosome:IRGSP-1.0:3:3854439:3858293:1 gene:Os03g0171900 transcript:Os03t0171900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alanine:glyoxylate aminotransferase-like protein (Fragment). (Os03t0171900-01);Similar to Alanine:glyoxylate aminotransferase-like protein (Fragment). (Os03t0171900-02)
Sequence	MAVSSSSLLLRRGATGGAGRRWGPGEALRRLVSSSEAAPAEKVPARSPPVMPPFEHRPRP YAGWSGDEILAKRKQFLGSSVFYYYQKPLNIVEGKMQYLYDENGKRYLDCFGGIVTVSCG HCHPDIVNAVVEQTKLLQHTTTIYLNQPIVEFAEALASKMPGNLKVVYFVNSGTEANELA MLMARLYSGNLNMIALRNAYHGGSAGTIGLTGLQTWKYPIPQGEIHHVMNPDPYRGTFGS DAVAYAKEVEEQINYGTSGRVAGFIAETFQGVGGAVELAPGYLKLAYDTVRKAGGVCIAD EVQSGFGRTGSHYWGFQTQDVIPDIVTMAKGIGNGLPLGAVVTTPEIANVLAQKIQFNTF GGNPVCSVGGLAVLKVLDKEKRQAHCADVGSHLVNRLKELQQKHEIIGDVRGRGLMLGVE LVTDRKEKTPAKAETNLLFEKLKDLNILVGKGGLHGNVFRIKPPMCFTRDDADYLVDAMD YAMSGL

Transcript Sequence

Transcript ID	Os03t0171900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:3:3854439:3858293:1 gene:Os03g0171900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alanine:glyoxylate aminotransferase-like protein (Fragment). (Os03t0171900-01);Similar to Alanine:glyoxylate aminotransferase-like protein (Fragment). (Os03t0171900-02)
Sequence	CTCGATCGCGAGCTGTTGTTGTTTTGGTGGAAGAATCGGTCCGTGCGTGATTTGATCCAT GGCGGTGTCGTCGTCGTCGCTGCTGCTCCGCCGCGGAGCCACCGGCGGCGCCGGGAGACG GTGGGGTCCGGGGGAGGCGTTGCGGAGGCTGGTGTCGTCGTCGGAGGCGGCGCCGGCGGA GAAGGTTCCGGCGCGGTCGCCGCCGGTGATGCCGCCGTTCGAGCACCGGCCCAGGCCGTA CGCCGGGTGGAGCGGCGATGAGATCCTCGCGAAGAGGAAGCAGTTTCTTGGATCGTCTGT GTTCTACTACTACCAGAAGCCGCTGAACATTGTGGAAGGGAAGATGCAGTATCTGTACGA TGAGAATGGGAAGAGATACCTCGATTGCTTCGGAGGCATCGTGACAGTTTCATGCGGCCA TTGCCATCCGGATATCGTGAACGCTGTGGTGGAGCAGACCAAGCTGCTCCAGCACACGAC CACCATATATTTGAATCAACCCATCGTCGAGTTTGCAGAAGCGCTCGCGTCCAAGATGCC AGGAAATCTCAAGGTGGTGTATTTTGTGAATTCTGGGACTGAAGCGAATGAACTGGCGAT GCTGATGGCTCGGCTGTACAGTGGGAATCTCAATATGATTGCATTGAGAAATGCTTATCA TGGTGGTAGTGCTGGAACAATAGGATTGACGGGTTTGCAGACGTGGAAGTACCCAATCCC TCAGGGCGAAATACATCATGTCATGAACCCTGATCCTTACCGTGGAACTTTCGGTTCTGA TGCTGTAGCTTATGCCAAGGAAGTCGAAGAACAAATAAATTATGGTACCTCCGGAAGGGT TGCGGGTTTCATTGCTGAAACTTTCCAAGGCGTGGGAGGTGCAGTTGAACTAGCTCCTGG ATATTTAAAGTTAGCTTATGACACTGTCCGGAAGGCTGGTGGTGTTTGTATAGCTGATGA AGTCCAGAGTGGATTTGGTCGAACTGGAAGTCACTATTGGGGATTTCAGACGCAAGATGT TATTCCTGACATTGTAACAATGGCAAAGGGAATTGGAAATGGTCTACCATTGGGGGCAGT TGTAACAACACCCGAGATTGCAAATGTGCTGGCGCAAAAAATCCAATTTAACACATTTGG TGGAAACCCTGTTTGCTCCGTTGGTGGACTTGCTGTGCTCAAGGTTCTTGACAAGGAGAA ACGCCAGGCACATTGTGCTGATGTTGGATCTCATTTGGTGAATCGTCTAAAAGAGCTCCA GCAAAAGCATGAAATCATTGGAGATGTTAGAGGGAGGGGATTGATGCTTGGGGTGGAGCT TGTTACCGATAGGAAGGAGAAGACACCTGCCAAGGCCGAGACCAATTTATTGTTTGAGAA ACTCAAGGATCTCAACATTTTAGTTGGAAAAGGTGGTCTGCATGGTAATGTCTTCAGGAT AAAACCACCAATGTGCTTTACAAGGGATGATGCAGATTACCTGGTGGATGCCATGGACTA TGCAATGTCAGGGCTCTGAGAGCTGCACCCTGAATACCAAAGCCGTCTGCCATCCTCAAC GCAAGAAGATTCATGTCATGATGCTACCGGTAGCCCAGCCAACTCTTTCCATGTACATGC TTCCAGTTCCAGTTGATGTGTTGTGTAACGGTGGCAGAACCATGTAGGTGTGGAAATCCC AAGAATAAGATGGAAGGAAAGGACCATGTAGGTGTGGCTTTCCCATTGTAAAAGTGGCAG TTCTGCAACAGTGAGAAGGCCATGGGTGATTGTAAGCAGTGTTGGCCTTAGGGGCAACAT GTGTATCCAAAAGAAAAACTAATAAATGTATGCTTGTTGTGCACC